Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.008G276400 Phaseolus vulgaris HOM05D000053 ORTHO05D000035 1.2e-100 369.8 183 100.0
Phvul.008G277226 Phaseolus vulgaris HOM05D000053 ORTHO05D000035 2.1e-31 139.8 108 65.7
Phvul.008G276100 Phaseolus vulgaris HOM05D000053 ORTHO05D000035 5.1e-30 135.2 82 76.8
VMungo0647G0325 Vigna mungo HOM05D000053 ORTHO05D000035 8.7e-30 134.4 94 73.4
Phvul.008G277268 Phaseolus vulgaris HOM05D000053 ORTHO05D000035 3.3e-29 132.5 108 63.9
Phvul.008G276300 Phaseolus vulgaris HOM05D000053 ORTHO05D000035 5.6e-29 131.7 175 46.3
Glyma.16G169700 Glycine max HOM05D000053 ORTHO05D000035 7.4e-29 131.3 179 43.6
VMungo0647G1375 Vigna mungo HOM05D000121 ORTHO05D000102 6.4e-25 118.2 94 66.0
Glyma.14G015500 Glycine max HOM05D000053 ORTHO05D000035 2.4e-24 116.3 94 60.6
VMungo0647G0180 Vigna mungo HOM05D000053 ORTHO05D000035 7.1e-24 114.8 92 65.2
VMungo0647G2230 Vigna mungo HOM05D000053 ORTHO05D000035 9.3e-24 114.4 92 65.2
VMungo0647G0835 Vigna mungo HOM05D000053 ORTHO05D000035 5.6e-21 105.1 92 62.0
VMungo0647G1285 Vigna mungo HOM05D000053 ORTHO05D000035 1.3e-20 104.0 92 60.9
Glyma.16G169400 Glycine max HOM05D000053 ORTHO05D000035 6.2e-20 101.7 94 56.4
Phvul.008G273700 Phaseolus vulgaris HOM05D000053 ORTHO05D000035 2.4e-19 99.8 89 56.2
Phvul.008G273600 Phaseolus vulgaris HOM05D000053 ORTHO05D000035 1.2e-18 97.4 86 54.7
Glyma.16G169200 Glycine max HOM05D000053 ORTHO05D000035 7.6e-18 94.7 94 54.3
Glyma.16G168700 Glycine max HOM05D000053 ORTHO05D000035 3.2e-16 89.4 175 38.9
Glyma.16G169300 Glycine max HOM05D000053 ORTHO05D000035 4.2e-16 89.0 93 53.8
Phvul.008G273900 Phaseolus vulgaris HOM05D000053 ORTHO05D000035 4.2e-16 89.0 92 52.2
Glyma.16G169500 Glycine max HOM05D000053 ORTHO05D000035 9.3e-16 87.8 92 54.3
TPR.G8587 Trifolium pratense HOM05D000053 ORTHO05D000035 2.7e-15 86.3 93 54.8
TPR.G1240 Trifolium pratense HOM05D000053 ORTHO05D000035 6.0e-15 85.1 99 53.5
Glyma.16G169100 Glycine max HOM05D000053 ORTHO05D000035 1.0e-14 84.3 92 50.0
arahy.Tifrunner.gnm1.ann1.U2RA4L Arachis hypogaea HOM05D000053 ORTHO05D000035 3.9e-14 82.4 167 35.3
arahy.Tifrunner.gnm1.ann1.24K8LL Arachis hypogaea HOM05D000053 ORTHO05D000035 5.1e-14 82.0 168 35.7
Medtr5g079980 Medicago truncatula HOM05D000053 ORTHO05D000035 5.1e-14 82.0 93 54.8
Medtr5g095420 Medicago truncatula HOM05D000053 ORTHO05D000035 5.1e-14 82.0 91 53.8
Medtr5g094820 Medicago truncatula HOM05D000121 ORTHO05D000102 1.9e-13 80.1 95 47.4
arahy.Tifrunner.gnm1.ann1.2X3DGJ Arachis hypogaea HOM05D000053 ORTHO05D000035 2.5e-13 79.7 167 35.3
Medtr5g080000 Medicago truncatula HOM05D000053 ORTHO05D000035 2.5e-13 79.7 92 53.3
Glyma.13G227800 Glycine max HOM05D000053 ORTHO05D000035 5.7e-13 78.6 151 37.7
arahy.Tifrunner.gnm1.ann1.L85DV8 Arachis hypogaea HOM05D000053 ORTHO05D000035 9.7e-13 77.8 168 34.5
arahy.Tifrunner.gnm1.ann1.67CJVF Arachis hypogaea HOM05D000053 ORTHO05D000035 2.2e-12 76.6 169 35.5
arahy.Tifrunner.gnm1.ann1.R600FJ Arachis hypogaea HOM05D000053 ORTHO05D000035 2.8e-12 76.3 168 37.5
arahy.Tifrunner.gnm1.ann1.F3E022 Arachis hypogaea HOM05D000053 ORTHO05D000035 3.7e-12 75.9 167 34.1
Phvul.008G274000 Phaseolus vulgaris HOM05D000053 ORTHO05D000035 4.8e-12 75.5 86 47.7
arahy.Tifrunner.gnm1.ann1.2ZUN3L Arachis hypogaea HOM05D000053 ORTHO05D000035 8.2e-12 74.7 95 47.4
arahy.Tifrunner.gnm1.ann1.75UAZN Arachis hypogaea HOM05D000053 ORTHO05D000035 8.2e-12 74.7 103 43.7
arahy.Tifrunner.gnm1.ann1.BMX328 Arachis hypogaea HOM05D000053 ORTHO05D000035 8.2e-12 74.7 103 43.7
Psat0s4150g0080 Pisum sativum HOM05D000053 ORTHO05D000035 1.1e-11 74.3 95 48.4
TPR.G1206 Trifolium pratense HOM05D000053 ORTHO05D000035 1.1e-11 74.3 93 51.6
arahy.Tifrunner.gnm1.ann1.K5Z9DT Arachis hypogaea HOM05D000053 ORTHO05D000035 1.4e-11 73.9 97 46.4
arahy.Tifrunner.gnm1.ann1.KIDU3N Arachis hypogaea HOM05D000053 ORTHO05D000035 1.4e-11 73.9 167 38.9
Phvul.008G274100 Phaseolus vulgaris HOM05D000053 ORTHO05D000035 1.4e-11 73.9 185 35.1
TPR.G14151 Trifolium pratense HOM05D000053 ORTHO05D000035 1.4e-11 73.9 73 57.5
LjContig00081g0000300 Lotus japonicus HOM05D000053 ORTHO05D000035 2.4e-11 73.2 201 29.9
Psat0s4150g0040 Pisum sativum HOM05D000053 ORTHO05D000035 2.4e-11 73.2 94 50.0
Medtr5g095120 Medicago truncatula HOM05D000053 ORTHO05D000035 3.1e-11 72.8 73 57.5
arahy.Tifrunner.gnm1.ann1.T6ZM14 Arachis hypogaea HOM05D000053 ORTHO05D000035 6.9e-11 71.6 97 44.3
arahy.Tifrunner.gnm1.ann1.XTV6UZ Arachis hypogaea HOM05D000053 ORTHO05D000035 2.0e-10 70.1 97 45.4
arahy.Tifrunner.gnm1.ann1.GHZ33T Arachis hypogaea HOM05D000053 ORTHO05D000035 2.6e-10 69.7 168 33.3
arahy.Tifrunner.gnm1.ann1.ZU31CU Arachis hypogaea HOM05D000053 ORTHO05D000035 3.4e-10 69.3 95 45.3
Medtr5g096360 Medicago truncatula HOM05D000053 ORTHO05D000035 3.4e-10 69.3 61 59.0
arahy.Tifrunner.gnm1.ann1.TTKZ9K Arachis hypogaea HOM05D000053 ORTHO05D000035 1.7e-09 67.0 91 48.4
arahy.Tifrunner.gnm1.ann1.V485GG Arachis hypogaea HOM05D000053 ORTHO05D000035 1.7e-09 67.0 172 33.7
Medtr2g032560 Medicago truncatula HOM05D000053 ORTHO05D000035 1.7e-09 67.0 105 45.7
Medtr6g471240 Medicago truncatula HOM05D000053 ORTHO05D000035 1.7e-09 67.0 66 51.5
arahy.Tifrunner.gnm1.ann1.DKBS4X Arachis hypogaea HOM05D000053 ORTHO05D000035 2.2e-09 66.6 163 39.9
arahy.Tifrunner.gnm1.ann1.18C3F6 Arachis hypogaea HOM05D000053 ORTHO05D000035 2.9e-09 66.2 164 35.4
arahy.Tifrunner.gnm1.ann1.HPT1MM Arachis hypogaea HOM05D000053 ORTHO05D000035 2.9e-09 66.2 163 33.1
TPR.G14146 Trifolium pratense HOM05D000053 ORTHO05D000035 2.9e-09 66.2 72 51.4
arahy.Tifrunner.gnm1.ann1.FXNF4I Arachis hypogaea HOM05D000053 ORTHO05D000035 3.8e-09 65.9 130 42.3
arahy.Tifrunner.gnm1.ann1.QQT54I Arachis hypogaea HOM05D000053 ORTHO05D000035 3.8e-09 65.9 170 32.9
arahy.Tifrunner.gnm1.ann1.WNWA62 Arachis hypogaea HOM05D000053 ORTHO05D000035 5.0e-09 65.5 163 33.7
arahy.Tifrunner.gnm1.ann1.YJIY2K Arachis hypogaea HOM05D000053 ORTHO05D000035 5.0e-09 65.5 95 44.2
arahy.Tifrunner.gnm1.ann1.Q457CY Arachis hypogaea HOM05D000053 ORTHO05D000035 6.5e-09 65.1 161 36.0
arahy.Tifrunner.gnm1.ann1.YAIN44 Arachis hypogaea HOM05D000053 ORTHO05D000035 6.5e-09 65.1 91 47.3
arahy.Tifrunner.gnm1.ann1.I63QCE Arachis hypogaea HOM05D000053 ORTHO05D000035 8.5e-09 64.7 169 33.1
AL4G28630 Arabidopsis lyrata HOM05D000053 ORTHO05D000035 1.4e-08 63.9 82 43.9
arahy.Tifrunner.gnm1.ann1.IH6MF5 Arachis hypogaea HOM05D000053 ORTHO05D000035 1.4e-08 63.9 95 42.1
Medtr5g096340 Medicago truncatula HOM05D000053 ORTHO05D000035 1.4e-08 63.9 98 43.9
arahy.Tifrunner.gnm1.ann1.21TZH2 Arachis hypogaea HOM05D000053 ORTHO05D000035 3.2e-08 62.8 91 41.8
arahy.Tifrunner.gnm1.ann1.BBM6FL Arachis hypogaea HOM05D003834 ORTHO05D004483 3.2e-08 62.8 91 41.8
arahy.Tifrunner.gnm1.ann1.QSB38G Arachis hypogaea HOM05D000053 ORTHO05D000035 3.2e-08 62.8 86 38.4
arahy.Tifrunner.gnm1.ann1.S3Z82H Arachis hypogaea HOM05D000053 ORTHO05D000035 4.2e-08 62.4 165 33.3
TPR.G1256 Trifolium pratense HOM05D000053 ORTHO05D000035 4.2e-08 62.4 97 41.2
CAN.G134.223 Capsicum annuum HOM05D000053 ORTHO05D000035 5.5e-08 62.0 170 31.8
arahy.Tifrunner.gnm1.ann1.3MHP6W Arachis hypogaea HOM05D000053 ORTHO05D000035 7.2e-08 61.6 160 31.9
arahy.Tifrunner.gnm1.ann1.6DS8WC Arachis hypogaea HOM05D000053 ORTHO05D000035 9.4e-08 61.2 90 50.0
arahy.Tifrunner.gnm1.ann1.08QZGW Arachis hypogaea HOM05D003834 ORTHO05D004483 1.2e-07 60.8 91 41.8
BraA03t11100Z Brassica rapa HOM05D000053 ORTHO05D000035 1.2e-07 60.8 85 38.8
LjContig00272g0011467 Lotus japonicus HOM05D000053 ORTHO05D000035 1.2e-07 60.8 171 35.1
A03p18370 Brassica napus HOM05D000053 ORTHO05D000035 2.1e-07 60.1 90 36.7
Gohir.D05G375300 Gossypium hirsutum HOM05D000053 ORTHO05D000035 2.1e-07 60.1 178 33.1
Manes.10G026700 Manihot esculenta HOM05D000053 ORTHO05D000035 2.1e-07 60.1 195 27.2
Ciclev10014309m.g Citrus clementina HOM05D000053 ORTHO05D000035 2.7e-07 59.7 173 28.9
COL.COLO4_35013 Corchorus olitorius HOM05D000053 ORTHO05D000035 2.7e-07 59.7 167 29.9
Phvul.008G093900 Phaseolus vulgaris HOM05D000053 ORTHO05D000448 4.6e-07 58.9 85 43.5
CANSAT56G2418 Cannabis sativa HOM05D000053 ORTHO05D000035 6.1e-07 58.5 193 30.1
Ciclev10018299m.g Citrus clementina HOM05D000053 ORTHO05D000035 6.1e-07 58.5 86 39.5
Duzib268G1127 Durio zibethinus HOM05D000053 ORTHO05D000035 6.1e-07 58.5 114 34.2
Gorai.002G264700 Gossypium raimondii HOM05D000053 ORTHO05D000448 1.0e-06 57.8 99 39.4
Thecc.07G158900 Theobroma cacao HOM05D000053 ORTHO05D000035 1.4e-06 57.4 108 36.1
Ciclev10014016m.g Citrus clementina HOM05D000053 ORTHO05D000035 1.8e-06 57.0 135 31.1
Gohir.A04G005750 Gossypium hirsutum HOM05D000053 ORTHO05D000035 1.8e-06 57.0 111 36.9
AT2G33060 Arabidopsis thaliana HOM05D000053 ORTHO05D000035 2.3e-06 56.6 82 41.5
BcaC01g05885 Brassica carinata HOM05D000053 ORTHO05D000035 2.3e-06 56.6 90 34.4
C03p21440 Brassica napus HOM05D000053 ORTHO05D000035 2.3e-06 56.6 90 34.4
Ca_06124_v3 Cicer arietinum L. HOM05D000053 ORTHO05D000035 2.3e-06 56.6 172 27.9
Thecc.07G114600 Theobroma cacao HOM05D000053 ORTHO05D000035 2.3e-06 56.6 92 34.8
TPR.G25126 Trifolium pratense HOM05D000053 ORTHO05D000035 2.3e-06 56.6 107 33.6
BolC3t14528H Brassica oleracea HOM05D000053 ORTHO05D000035 3.0e-06 56.2 90 34.4
Lj2g0012615 Lotus japonicus HOM05D000053 ORTHO05D000035 3.9e-06 55.8 90 41.1
Medtr5g087320 Medicago truncatula HOM05D000053 ORTHO05D000035 3.9e-06 55.8 174 27.0
Cc01_g08250 Coffea canephora HOM05D000053 ORTHO05D000035 5.1e-06 55.5 86 38.4
arahy.Tifrunner.gnm1.ann1.6R79T7 Arachis hypogaea HOM05D000053 ORTHO05D000035 6.7e-06 55.1 77 40.3
BraA05t20192Z Brassica rapa HOM05D000053 ORTHO05D000035 6.7e-06 55.1 97 37.1
Gohir.D01G218100 Gossypium hirsutum HOM05D000053 ORTHO05D000448 6.7e-06 55.1 95 38.9
Phvul.008G277000 Phaseolus vulgaris HOM05D000053 ORTHO05D000035 6.7e-06 55.1 114 35.1
QL08p013111 Quercus lobata HOM05D000053 ORTHO05D000035 6.7e-06 55.1 88 40.9
Solyc12g013740.3 Solanum lycopersicum HOM05D000053 ORTHO05D000035 6.7e-06 55.1 86 40.7
Thecc.07G019200 Theobroma cacao HOM05D000053 ORTHO05D000035 6.7e-06 55.1 113 33.6
arahy.Tifrunner.gnm1.ann1.MF71YY Arachis hypogaea HOM05D000053 ORTHO05D000035 8.8e-06 54.7 160 30.0
arahy.Tifrunner.gnm1.ann1.V74NXF Arachis hypogaea HOM05D000053 ORTHO05D000035 8.8e-06 54.7 161 34.2
Ciclev10017896m.g Citrus clementina HOM05D000053 ORTHO05D000035 8.8e-06 54.7 135 31.1
Gohir.D05G380700 Gossypium hirsutum HOM05D000053 ORTHO05D000035 8.8e-06 54.7 90 41.1
Lalb_Chr07g0186401 Lupinus albus HOM05D000094 ORTHO05D005974 8.8e-06 54.7 104 31.7
Medtr4g064760 Medicago truncatula HOM05D000053 ORTHO05D000035 8.8e-06 54.7 180 27.8
QL03p010813 Quercus lobata HOM05D000053 ORTHO05D000035 8.8e-06 54.7 170 28.8
TPR.G14174 Trifolium pratense HOM05D000053 ORTHO05D000035 8.8e-06 54.7 52 59.6


User provided reference genes

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