Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.008G275600 Phaseolus vulgaris HOM05D007550 ORTHO05D009474 6.8e-78 293.9 145 100.0
VMungo0647G1572 Vigna mungo HOM05D007550 ORTHO05D009474 8.1e-47 190.7 139 74.8
LjContig00272g0022958 Lotus japonicus HOM05D007550 ORTHO05D009474 3.9e-41 171.8 151 63.6
Glyma.14G015900 Glycine max HOM05D007550 ORTHO05D009474 6.6e-41 171.0 129 75.2
Medtr5g094600 Medicago truncatula HOM05D007550 ORTHO05D009474 4.3e-40 168.3 140 63.6
Psat2g008720 Pisum sativum HOM05D007550 ORTHO05D009474 1.4e-38 163.3 138 63.0
QL08p005510 Quercus lobata HOM05D007550 ORTHO05D009474 8.4e-36 154.1 102 71.6
Duzib213G0332 Durio zibethinus HOM05D007550 ORTHO05D009474 1.9e-35 152.9 114 64.9
Gorai.002G096500 Gossypium raimondii HOM05D007550 ORTHO05D009474 7.1e-35 151.0 112 63.4
Thecc.07G022400 Theobroma cacao HOM05D007550 ORTHO05D009474 4.6e-34 148.3 111 63.1
Gohir.A01G087300 Gossypium hirsutum HOM05D007550 ORTHO05D009474 1.0e-33 147.1 112 62.5
GSVIVG01037778001 Vitis vinifera HOM05D007550 ORTHO05D009474 1.0e-33 147.1 109 67.9
Lalb_Chr17g0348791 Lupinus albus HOM05D007550 ORTHO05D009474 3.9e-33 145.2 149 58.4
Manes.15G063300 Manihot esculenta HOM05D007550 ORTHO05D009474 5.1e-33 144.8 150 56.7
Atru.chr2.3607 Acer truncatum HOM05D007550 ORTHO05D009474 8.7e-33 144.1 113 61.1
MD11G1204800 Malus domestica HOM05D007550 ORTHO05D009474 1.1e-32 143.7 92 73.9
TAR626G1551 Trochodendron aralioides HOM05D007550 ORTHO05D009474 9.6e-32 140.6 101 64.4
AL8G31140 Arabidopsis lyrata HOM05D007550 ORTHO05D009474 1.3e-31 140.2 150 50.0
THA.LOC104817699 Tarenaya hassleriana HOM05D007550 ORTHO05D009474 3.7e-31 138.7 139 54.7
A10p12800 Brassica napus HOM05D007550 ORTHO05D009474 6.2e-31 137.9 135 53.3
BraA10t43373Z Brassica rapa HOM05D007550 ORTHO05D009474 6.2e-31 137.9 135 53.3
COL.COLO4_09786 Corchorus olitorius HOM05D007550 ORTHO05D009474 6.2e-31 137.9 120 56.7
Thhalv10014968m.g Eutrema salsugineum HOM05D007550 ORTHO05D009474 6.2e-31 137.9 137 53.3
Actinidia39070 Actinidia chinensis HOM05D007550 ORTHO05D009474 1.4e-30 136.7 151 52.3
Aa31LG3G11520 Aethionema arabicum HOM05D007550 ORTHO05D009474 1.8e-30 136.3 127 56.7
Nn1g07439 Nelumbo nucifera HOM05D007550 ORTHO05D009474 1.8e-30 136.3 101 65.3
Sed0001315 Sechium edule HOM05D007550 ORTHO05D009474 1.8e-30 136.3 104 64.4
CARHR268880 Cardamine hirsuta HOM05D007550 ORTHO05D009474 2.4e-30 136.0 148 52.7
Sabra02G0058600 Salix brachista HOM05D007550 ORTHO05D009474 2.4e-30 136.0 107 65.4
TWI38G1227 Tripterygium wilfordii HOM05D007550 ORTHO05D009474 2.4e-30 136.0 140 55.0
arahy.Tifrunner.gnm1.ann1.S0MYI4 Arachis hypogaea HOM05D007550 ORTHO05D009474 4.0e-30 135.2 155 51.0
FvH4_3g24050 Fragaria vesca HOM05D007550 ORTHO05D009474 9.0e-30 134.0 106 64.2
AT5G55570 Arabidopsis thaliana HOM05D007550 ORTHO05D009474 1.2e-29 133.7 148 50.7
FAN11G2859 Fragaria x ananassa HOM05D007550 ORTHO05D009474 1.2e-29 133.7 93 69.9
arahy.Tifrunner.gnm1.ann1.R7ZLS4 Arachis hypogaea HOM05D007550 ORTHO05D009474 1.5e-29 133.3 155 51.0
MELO3C014132.2 Cucumis melo HOM05D007550 ORTHO05D009474 1.5e-29 133.3 104 63.5
Dinv10312 Davidia involucrata HOM05D007550 ORTHO05D009474 1.5e-29 133.3 144 52.8
RcHm_v2.0_Chr5g0042631 Rosa chinensis HOM05D007550 ORTHO05D009474 1.5e-29 133.3 93 68.8
C09p46340 Brassica napus HOM05D007550 ORTHO05D009474 3.4e-29 132.1 135 51.9
CiPaw.12G135900 Carya illinoinensis HOM05D007550 ORTHO05D009474 3.4e-29 132.1 107 63.6
ECA240G1453 Erigeron canadensis HOM05D007550 ORTHO05D009474 3.4e-29 132.1 93 69.9
Lj1A885G31 Lonicera japonica HOM05D007550 ORTHO05D009474 3.4e-29 132.1 129 56.6
BolC9t57498H Brassica oleracea HOM05D007550 ORTHO05D009474 4.5e-29 131.7 135 51.9
ATR1149G080 Amborella trichopoda HOM05D007550 ORTHO05D009474 7.6e-29 131.0 125 55.2
CAN.G410.43 Capsicum annuum HOM05D007550 ORTHO05D009474 7.6e-29 131.0 104 58.7
CDE06G2160 Ceratophyllum demersum HOM05D007550 ORTHO05D009474 7.6e-29 131.0 92 64.1
CsaV3_3G004390 Cucumis sativus L. HOM05D007550 ORTHO05D009474 7.6e-29 131.0 106 62.3
HanXRQChr13g0408011 Helianthus annuus HOM05D007550 ORTHO05D009474 3.8e-28 128.6 84 71.4
Hma1.2p1_0036F.1_g022730 Hydrangea macrophylla HOM05D007550 ORTHO05D009474 6.4e-28 127.9 91 68.1
Solyc12g015630.2 Solanum lycopersicum HOM05D007550 ORTHO05D009474 6.4e-28 127.9 105 59.0
Migut.M01677 Erythranthe guttata HOM05D007550 ORTHO05D009474 8.4e-28 127.5 102 62.7
PGSC0003DMG400029800 Solanum tuberosum HOM05D007550 ORTHO05D009474 8.4e-28 127.5 105 58.1
Sc18g0004240 Simmondsia chinensis HOM05D007550 ORTHO05D009474 1.1e-27 127.1 104 63.5
Peaxi162Scf00955g00219 Petunia axillaris HOM05D007550 ORTHO05D009474 1.4e-27 126.7 84 67.9
FAN16G0277 Fragaria x ananassa HOM05D007550 ORTHO05D009474 2.4e-27 125.9 93 65.6
DCAR_022604 Daucus carota HOM05D007550 ORTHO05D009474 7.1e-27 124.4 111 56.8
Nitab4.5_0001750g0040 Nicotiana tabacum HOM05D007550 ORTHO05D009474 2.1e-26 122.9 102 55.9
Sopen12g007530 Solanum pennellii HOM05D007550 ORTHO05D009474 4.6e-26 121.7 105 58.1
Gohir.D01G073600 Gossypium hirsutum HOM05D007550 ORTHO05D009474 6.0e-26 121.3 88 63.6
Os01g0762300 Oryza sativa ssp. japonica HOM05D007550 ORTHO05D009474 1.0e-25 120.6 84 66.7
Ciclev10009869m.g Citrus clementina HOM05D007550 ORTHO05D009474 1.8e-25 119.8 79 69.6
Zm00001eb370450 Zea mays HOM05D007550 ORTHO05D009474 1.8e-25 119.8 110 57.3
Nitab4.5_0000163g0330 Nicotiana tabacum HOM05D007550 ORTHO05D009474 3.0e-25 119.0 102 56.9
Cc05_g14670 Coffea canephora HOM05D007550 ORTHO05D009474 5.1e-25 118.2 107 57.9
Cfa020230 Carpinus fangiana HOM05D007550 ORTHO05D009474 6.7e-25 117.9 103 58.3
Potri.011G085501 Populus trichocarpa HOM05D007550 ORTHO05D009474 8.7e-25 117.5 83 69.9
HPP92_028367 Vanilla planifolia HOM05D007550 ORTHO05D009474 1.1e-24 117.1 100 58.0
MSTRG.6984 Avicennia marina HOM05D007550 ORTHO05D009474 1.9e-24 116.3 102 62.7
Carub.0008s1594 Capsella rubella HOM05D007550 ORTHO05D009474 1.9e-24 116.3 124 52.4
ClCG10G004590 Citrullus lanatus HOM05D007550 ORTHO05D009474 2.5e-24 115.9 117 54.7
Mapoly0128s0022 Marchantia polymorpha HOM05D007550 ORTHO05D009474 3.7e-23 112.1 141 48.2
AagrBONN_evm.TU.Sc2ySwM_344.2781 Anthoceros agrestis HOM05D007550 ORTHO05D009474 8.2e-23 110.9 101 54.5
PGR031G0516 Punica granatum HOM05D007550 ORTHO05D009474 2.4e-22 109.4 68 75.0
BcaB08g35917 Brassica carinata HOM05D007550 ORTHO05D009474 6.9e-22 107.8 144 46.5
FAN21G0016 Fragaria x ananassa HOM05D007550 ORTHO05D009474 9.0e-22 107.5 90 61.1
FAN25G3253 Fragaria x ananassa HOM05D007550 ORTHO05D009474 1.2e-21 107.1 90 61.1
FAN25G1734 Fragaria x ananassa HOM05D007550 ORTHO05D009474 3.4e-21 105.5 77 67.5
PSO541G5298 Papaver somniferum HOM05D007550 ORTHO05D009474 7.6e-21 104.4 81 60.5
PSO675G9283 Papaver somniferum HOM05D007550 ORTHO05D009474 7.6e-21 104.4 81 60.5
CBR_g30607 Chara braunii HOM05D007550 ORTHO05D009474 1.7e-20 103.2 79 59.5
Oeu005969.1 Olea europaea HOM05D007550 ORTHO05D009474 2.9e-20 102.4 70 70.0
Aqoxy4G02213 Aquilegia oxysepala HOM05D007550 ORTHO05D009474 6.5e-20 101.3 64 73.4
unitig_899.g15275 Utricularia gibba HOM05D007550 ORTHO05D009474 1.3e-17 93.6 76 60.5
CANSAT56G0742 Cannabis sativa HOM05D007550 ORTHO05D009474 6.7e-17 91.3 109 47.7
EL10Ac4g07615 Beta vulgaris HOM05D007550 ORTHO05D009474 1.9e-16 89.7 102 45.1
Hma1.2p1_0036F.1_g022720 Hydrangea macrophylla HOM05D007550 ORTHO05D009474 2.5e-16 89.4 97 52.6
Pp3c18_5680 Physcomitrium patens HOM05D007550 ORTHO05D009474 1.6e-15 86.7 82 58.5
SGA_v2.0_scaffold168G38530 Striga asiatica HOM05D007550 ORTHO05D009474 1.8e-14 83.2 63 61.9
Cre03.g145567 Chlamydomonas reinhardtii HOM05D007550 ORTHO05D009474 3.1e-14 82.4 86 47.7
PRCOL_00004706 Prasinoderma coloniale HOM05D007550 ORTHO05D009474 2.0e-13 79.7 80 52.5
vmacro09669 Vaccinium macrocarpon HOM05D007550 ORTHO05D009474 1.1e-11 73.9 66 51.5
Potri.011G085700 Populus trichocarpa HOM05D007550 ORTHO05D009474 1.4e-09 67.0 56 66.1
MBI16_g11565_MAGBIO Magnolia biondii HOM05D007550 ORTHO05D009474 8.8e-09 64.3 52 57.7
Prupe.4G233900 Prunus persica HOM05D007550 ORTHO05D009474 1.1e-08 63.9 41 73.2
Sp6g17490 Schrenkiella parvula HOM05D007550 ORTHO05D009474 3.3e-08 62.4 100 41.0
Ah.06g181190 Amaranthus hybridus HOM05D000063 ORTHO05D000906 1.3e-07 60.5 58 55.2
MBI16_g11563_MAGBIO Magnolia biondii HOM05D007550 ORTHO05D009474 3.1e-06 55.8 33 66.7
Hund01919 Selenicereus undatus HOM05D007550 ORTHO05D009474 4.1e-06 55.5 49 53.1


User provided reference genes

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