Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.008G272400 Phaseolus vulgaris HOM05D006019 ORTHO05D007900 1.8e-304 1048.5 542 100.0
VMungo0647G0128 Vigna mungo HOM05D006019 ORTHO05D007900 1.7e-278 962.2 542 92.6
Glyma.14G018700 Glycine max HOM05D006019 ORTHO05D007900 2.2e-262 908.7 548 87.4
Glyma.02G294900 Glycine max HOM05D006019 ORTHO05D007900 3.7e-262 907.9 545 87.7
LjContig00272g0018197 Lotus japonicus HOM05D006019 ORTHO05D007900 3.2e-245 851.7 544 82.5
Lalb_Chr04g0248161 Lupinus albus HOM05D006019 ORTHO05D007900 2.5e-234 815.5 546 79.3
TPR.G35353 Trifolium pratense HOM05D006019 ORTHO05D007900 5.2e-224 781.2 549 75.6
Medtr5g093830 Medicago truncatula HOM05D006019 ORTHO05D007900 7.1e-221 770.8 550 75.3
Psat2g009800 Pisum sativum HOM05D006019 ORTHO05D007900 1.0e-219 766.9 544 74.6
CSS0042888 Camellia sinensis var. sinensis HOM05D006019 ORTHO05D007900 1.3e-219 766.5 551 71.7
Atru.chr2.3529 Acer truncatum HOM05D006019 ORTHO05D007900 6.6e-219 764.2 554 72.9
QL08p020269 Quercus lobata HOM05D006019 ORTHO05D007900 3.3e-218 761.9 547 73.3
Atru.chr2.3549 Acer truncatum HOM05D006019 ORTHO05D007900 2.8e-217 758.8 554 72.2
CSS0000535 Camellia sinensis var. sinensis HOM05D006019 ORTHO05D007900 2.8e-217 758.8 551 71.0
arahy.Tifrunner.gnm1.ann1.G2L6CM Arachis hypogaea HOM05D006019 ORTHO05D007900 1.5e-215 753.1 462 83.8
Manes.03G136600 Manihot esculenta HOM05D006019 ORTHO05D007900 7.6e-215 750.7 519 73.8
CiPaw.11G172700 Carya illinoinensis HOM05D006019 ORTHO05D007900 6.4e-214 747.7 536 73.1
TAR629G1914 Trochodendron aralioides HOM05D006019 ORTHO05D007900 2.1e-212 742.7 527 72.5
Eucgr.F03504 Eucalyptus grandis HOM05D006019 ORTHO05D007900 4.6e-212 741.5 553 69.8
GSVIVG01037722001 Vitis vinifera HOM05D006019 ORTHO05D007900 7.9e-212 740.7 491 76.0
Ca_06346_v3 Cicer arietinum L. HOM05D006019 ORTHO05D007900 1.3e-211 740.0 440 84.8
Ciclev10007944m.g Citrus clementina HOM05D006019 ORTHO05D007900 5.1e-211 738.0 547 70.9
Potri.015G065900 Populus trichocarpa HOM05D006019 ORTHO05D007900 4.3e-210 734.9 544 70.8
CANSAT11G1049 Cannabis sativa HOM05D006019 ORTHO05D007900 7.3e-210 734.2 561 67.7
Actinidia35369 Actinidia chinensis HOM05D006019 ORTHO05D007900 1.6e-209 733.0 472 77.3
Sabra15G0091100 Salix brachista HOM05D006019 ORTHO05D007900 3.1e-208 728.8 531 70.2
Haze_09462 Corylus avellana HOM05D006019 ORTHO05D007900 2.0e-207 726.1 559 69.6
FAN21G2609 Fragaria x ananassa HOM05D006019 ORTHO05D007900 3.4e-207 725.3 474 76.6
RcHm_v2.0_Chr5g0041541 Rosa chinensis HOM05D006019 ORTHO05D007900 3.4e-207 725.3 546 69.6
Dinv22232 Davidia involucrata HOM05D006019 ORTHO05D007900 2.9e-206 722.2 534 71.7
Peaxi162Scf00235g00727 Petunia axillaris HOM05D006019 ORTHO05D007900 6.4e-206 721.1 523 70.6
MD11G1209500 Malus domestica HOM05D006019 ORTHO05D007900 8.4e-206 720.7 548 69.0
ClCG10G005120 Citrullus lanatus HOM05D006019 ORTHO05D007900 1.9e-205 719.5 548 68.1
vmacro09689 Vaccinium macrocarpon HOM05D006019 ORTHO05D007900 3.2e-205 718.8 472 75.6
Duzib213G0195 Durio zibethinus HOM05D006019 ORTHO05D007900 4.2e-205 718.4 554 66.8
Prupe.4G223000 Prunus persica HOM05D006019 ORTHO05D007900 5.5e-205 718.0 483 75.4
Thecc.07G028300 Theobroma cacao HOM05D006019 ORTHO05D007900 7.1e-205 717.6 503 72.8
MELO3C014178.2 Cucumis melo HOM05D006019 ORTHO05D007900 1.3e-203 713.4 546 67.2
Nn1g07344 Nelumbo nucifera HOM05D006019 ORTHO05D007900 8.7e-203 710.7 470 73.8
CsaV3_3G004800 Cucumis sativus L. HOM05D006019 ORTHO05D007900 1.1e-202 710.3 543 67.2
PGR031G3909 Punica granatum HOM05D006019 ORTHO05D007900 1.1e-202 710.3 546 67.6
arahy.Tifrunner.gnm1.ann1.PR9FWM Arachis hypogaea HOM05D006019 ORTHO05D007900 4.3e-202 708.4 460 80.2
FAN25G1378 Fragaria x ananassa HOM05D006019 ORTHO05D007900 4.3e-202 708.4 546 69.4
Gorai.002G093600 Gossypium raimondii HOM05D006019 ORTHO05D007900 2.1e-201 706.1 473 73.8
Nitab4.5_0000984g0040 Nicotiana tabacum HOM05D006019 ORTHO05D007900 3.7e-201 705.3 533 68.7
COL.COLO4_09733 Corchorus olitorius HOM05D006019 ORTHO05D007900 4.8e-201 704.9 524 67.6
Gohir.A01G084500 Gossypium hirsutum HOM05D006019 ORTHO05D007900 3.1e-200 702.2 473 73.6
Cc05_g14300 Coffea canephora HOM05D006019 ORTHO05D007900 6.9e-200 701.0 528 68.2
Gohir.D01G070900 Gossypium hirsutum HOM05D006019 ORTHO05D007900 1.2e-199 700.3 540 67.8
Nitab4.5_0002826g0040 Nicotiana tabacum HOM05D006019 ORTHO05D007900 1.5e-199 699.9 473 73.8
CAN.G337.58 Capsicum annuum HOM05D006019 ORTHO05D007900 2.9e-198 695.7 533 66.8
PGSC0003DMG400022300 Solanum tuberosum HOM05D006019 ORTHO05D007900 6.5e-198 694.5 547 66.5
Cpa.g.sc284.5 Carica papaya HOM05D006019 ORTHO05D007900 1.4e-197 693.3 585 64.6
Lj1C880T10 Lonicera japonica HOM05D006019 ORTHO05D007900 1.4e-197 693.3 527 68.9
Sopen07g033150 Solanum pennellii HOM05D006019 ORTHO05D007900 3.2e-197 692.2 530 67.2
Migut.M01708 Erythranthe guttata HOM05D006019 ORTHO05D007900 7.1e-197 691.0 533 67.4
Solyc07g064950.3 Solanum lycopersicum HOM05D006019 ORTHO05D007900 9.3e-197 690.6 528 67.0
Sed0026759 Sechium edule HOM05D006019 ORTHO05D007900 3.5e-196 688.7 496 70.0
THA.LOC104817684 Tarenaya hassleriana HOM05D006019 ORTHO05D007900 7.9e-196 687.6 558 64.9
ECA240G2757 Erigeron canadensis HOM05D006019 ORTHO05D007900 5.1e-195 684.9 536 64.7
DCAR_017106 Daucus carota HOM05D006019 ORTHO05D007900 8.7e-195 684.1 442 76.5
Oeu026379.1 Olea europaea HOM05D006019 ORTHO05D007900 1.5e-194 683.3 468 72.0
Lsat_1_v5_gn_9_90660 Lactuca sativa HOM05D006019 ORTHO05D007900 1.3e-193 680.2 508 65.6
FvH4_3g23540 Fragaria vesca HOM05D006019 ORTHO05D007900 2.8e-193 679.1 523 68.3
TWI39G1205 Tripterygium wilfordii HOM05D006019 ORTHO05D007900 3.8e-190 668.7 508 67.1
HanXRQChr13g0408251 Helianthus annuus HOM05D006019 ORTHO05D007900 4.2e-189 665.2 543 60.6
Thhalv10013195m.g Eutrema salsugineum HOM05D006019 ORTHO05D007900 9.3e-189 664.1 473 69.3
AL8G30770 Arabidopsis lyrata HOM05D006019 ORTHO05D007900 6.1e-188 661.4 473 68.9
BcaB05g22192 Brassica carinata HOM05D006019 ORTHO05D007900 1.3e-187 660.2 477 68.3
Sp6g17150 Schrenkiella parvula HOM05D006019 ORTHO05D007900 1.5e-186 656.8 475 68.6
Carub.0008s1557 Capsella rubella HOM05D006019 ORTHO05D007900 3.3e-186 655.6 473 68.5
Aqoxy1G02863 Aquilegia oxysepala HOM05D006019 ORTHO05D007900 4.3e-186 655.2 464 70.3
AT5G55220 Arabidopsis thaliana HOM05D006019 ORTHO05D007900 7.4e-186 654.4 504 65.7
MBI19_g29437_MAGBIO Magnolia biondii HOM05D006019 ORTHO05D007900 2.2e-185 652.9 515 65.0
Aa31LG3G11210 Aethionema arabicum HOM05D006019 ORTHO05D007900 3.7e-185 652.1 546 61.7
CARHR268580 Cardamine hirsuta HOM05D006019 ORTHO05D007900 6.3e-185 651.4 556 62.2
AUR62020342 Chenopodium quinoa HOM05D006019 ORTHO05D007900 1.1e-184 650.6 534 62.2
BolC2t07733H Brassica oleracea HOM05D006019 ORTHO05D007900 2.4e-184 649.4 490 66.7
Rhsim04G0016400 Rhododendron simsii HOM05D006019 ORTHO05D000403 4.1e-184 648.7 558 62.9
FAN16G2690 Fragaria x ananassa HOM05D006019 ORTHO05D007900 2.6e-183 646.0 546 64.8
BraA02t06043Z Brassica rapa HOM05D006019 ORTHO05D007900 1.7e-182 643.3 477 66.9
HanXRQChr03g0076861 Helianthus annuus HOM05D006019 ORTHO05D007900 2.2e-182 642.9 548 60.2
EL10Ac4g07692 Beta vulgaris HOM05D006019 ORTHO05D007900 1.6e-180 636.7 567 57.8
PSO541G6030 Papaver somniferum HOM05D006019 ORTHO05D007900 2.7e-180 636.0 530 62.6
PSO675G6628 Papaver somniferum HOM05D006019 ORTHO05D007900 1.8e-179 633.3 530 62.5
C02p16310 Brassica napus HOM05D006019 ORTHO05D000403 3.6e-172 609.0 453 66.9
A02p09780 Brassica napus HOM05D006019 ORTHO05D000403 3.9e-171 605.5 453 66.7
AUR62015881 Chenopodium quinoa HOM05D006019 ORTHO05D007900 6.3e-169 598.2 533 59.1
ATR1128G029 Amborella trichopoda HOM05D006019 ORTHO05D007900 3.1e-168 595.9 444 66.4
Ah.06g182250 Amaranthus hybridus HOM05D006019 ORTHO05D007900 5.0e-166 588.6 546 56.6
BcaC03g14251 Brassica carinata HOM05D006019 ORTHO05D007900 7.2e-165 584.7 477 62.9
Hund01957 Selenicereus undatus HOM05D006019 ORTHO05D007900 7.2e-165 584.7 548 57.7
Os06g0308000 Oryza sativa ssp. japonica HOM05D006019 ORTHO05D007900 2.1e-156 556.6 451 60.8
SGA_v2.0_scaffold171G38908 Striga asiatica HOM05D006019 ORTHO05D007900 1.1e-152 544.3 490 59.2
Zm00001eb405570 Zea mays HOM05D006019 ORTHO05D007900 7.0e-152 541.6 514 53.9
unitig_22.g6170 Utricularia gibba HOM05D006019 ORTHO05D007900 3.5e-151 539.3 374 72.2
Sc16g0005740 Simmondsia chinensis HOM05D006019 ORTHO05D007900 9.4e-149 531.2 490 59.2
SalBow8G4839 Salvia bowleyana HOM05D006019 ORTHO05D007900 7.0e-144 515.0 530 55.5
BcaC03g14252 Brassica carinata HOM05D006019 ORTHO05D007900 2.3e-139 500.0 389 64.0
CDE04G0522 Ceratophyllum demersum HOM05D006019 ORTHO05D007900 4.3e-133 479.2 393 61.3
FAN11G0939 Fragaria x ananassa HOM05D006019 ORTHO05D007900 6.8e-131 471.9 383 64.2
SEGI_28230 Sequoiadendron giganteum HOM05D006019 ORTHO05D007900 4.4e-130 469.2 472 48.5
Mapoly0157s0020 Marchantia polymorpha HOM05D006019 ORTHO05D007900 2.8e-124 449.9 467 48.4
Pp3c11_10950 Physcomitrium patens HOM05D006019 ORTHO05D007900 7.5e-122 441.8 471 46.7
Pp3c2_30270 Physcomitrium patens HOM05D006019 ORTHO05D007900 2.4e-120 436.8 466 45.9
AagrBONN_evm.TU.Sc2ySwM_228.3732 Anthoceros agrestis HOM05D006019 ORTHO05D007900 7.8e-119 431.8 469 46.7
FAN25G3210 Fragaria x ananassa HOM05D006019 ORTHO05D007900 6.6e-118 428.7 405 59.8
CBR_g21850 Chara braunii HOM05D006019 ORTHO05D007900 2.1e-111 407.1 476 43.7
SMO361G0007 Selaginella moellendorffii HOM05D006019 ORTHO05D007900 8.4e-105 385.2 440 43.2
MCO13G367 Micromonas commoda HOM05D006019 ORTHO05D007900 3.8e-73 280.0 465 33.1
VMungo0464G1494 Vigna mungo HOM05D006019 ORTHO05D007900 1.3e-65 255.0 134 93.3
PRCOL_00002693 Prasinoderma coloniale HOM05D006019 ORTHO05D007900 1.8e-62 244.6 425 32.9
Glyma.14G020800 Glycine max HOM05D006019 ORTHO05D007900 5.7e-61 239.6 137 88.3
A10p12490 Brassica napus HOM05D006019 ORTHO05D007900 3.9e-54 216.9 387 41.3
Oeu026380.1 Olea europaea HOM05D006019 ORTHO05D007900 7.7e-42 176.0 138 63.8
TAR720G0004 Trochodendron aralioides HOM05D006019 ORTHO05D007900 2.1e-39 167.9 107 77.6
Glyma.14G020666 Glycine max HOM05D006019 ORTHO05D007900 4.4e-37 160.2 92 88.0
HPP92_015779 Vanilla planifolia HOM05D006019 ORTHO05D007900 7.5e-37 159.5 257 39.3
VMungo0647G0792 Vigna mungo HOM05D006019 ORTHO05D007900 4.8e-36 156.8 94 85.1
Cre01.g001750 Chlamydomonas reinhardtii HOM05D006019 ORTHO05D007900 3.8e-33 147.1 478 23.6
Hma1.2p1_4091F.1_g338270 Hydrangea macrophylla HOM05D006019 ORTHO05D007900 5.0e-25 120.2 113 63.7
CDE04G2936 Ceratophyllum demersum HOM05D006019 ORTHO05D007900 8.6e-25 119.4 68 85.3
BraA10t43342Z Brassica rapa HOM05D006019 ORTHO05D007900 5.7e-21 106.7 210 35.7
BolC9t57451H Brassica oleracea HOM05D006019 ORTHO05D007900 1.3e-20 105.5 196 34.7
C09p45770 Brassica napus HOM05D006019 ORTHO05D007900 1.8e-19 101.7 221 32.6
C09p45760 Brassica napus HOM05D006019 ORTHO05D007900 2.7e-18 97.8 120 50.8
BcaC04g20257 Brassica carinata HOM05D006019 ORTHO05D007900 1.2e-13 82.4 79 58.2
unitig_22.g6169 Utricularia gibba HOM05D006019 ORTHO05D007900 3.6e-07 60.8 133 37.6
BolC9t57452H Brassica oleracea HOM05D006019 ORTHO05D000049 6.8e-06 56.6 61 54.1


User provided reference genes

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