Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.008G270200 Phaseolus vulgaris HOM05D005193 ORTHO05D006316 0.0e+00 1763.8 901 100.0
VMungo0647G2043 Vigna mungo HOM05D005193 ORTHO05D006316 0.0e+00 1629.0 900 92.8
Glyma.14G021300 Glycine max HOM05D005193 ORTHO05D006316 0.0e+00 1559.7 900 88.7
LjContig00272g0004657 Lotus japonicus HOM05D005193 ORTHO05D006316 0.0e+00 1415.6 901 80.7
Ca_11685_v3 Cicer arietinum L. HOM05D005193 ORTHO05D006316 0.0e+00 1410.2 902 80.3
Psat6g078440 Pisum sativum HOM05D005193 ORTHO05D006316 0.0e+00 1380.5 902 78.9
arahy.Tifrunner.gnm1.ann1.K04HM7 Arachis hypogaea HOM05D005193 ORTHO05D006316 0.0e+00 1369.8 901 78.4
Medtr1g056460 Medicago truncatula HOM05D005193 ORTHO05D006316 0.0e+00 1364.7 902 78.6
arahy.Tifrunner.gnm1.ann1.J5TE7C Arachis hypogaea HOM05D005193 ORTHO05D006316 0.0e+00 1325.8 901 76.5
TPR.G2822 Trifolium pratense HOM05D005193 ORTHO05D006316 0.0e+00 1266.5 900 74.1
QL08p009116 Quercus lobata HOM05D005193 ORTHO05D006316 0.0e+00 1161.4 905 66.3
CiPaw.11G192300 Carya illinoinensis HOM05D005193 ORTHO05D006316 0.0e+00 1102.4 906 63.5
Ciclev10007388m.g Citrus clementina HOM05D005193 ORTHO05D006316 6.2e-312 1074.7 908 61.6
Dinv40781 Davidia involucrata HOM05D005193 ORTHO05D006316 3.8e-304 1048.1 875 62.6
MD03G1197400 Malus domestica HOM05D005193 ORTHO05D006316 1.6e-302 1042.7 910 60.4
Atru.chr2.3490 Acer truncatum HOM05D005193 ORTHO05D006316 4.7e-302 1041.2 870 62.3
Actinidia10743 Actinidia chinensis HOM05D005193 ORTHO05D006316 6.1e-302 1040.8 910 60.0
Potri.001G356700 Populus trichocarpa HOM05D005193 ORTHO05D006316 2.3e-301 1038.9 910 60.7
Gohir.D01G069100 Gossypium hirsutum HOM05D005193 ORTHO05D006316 1.7e-296 1022.7 911 58.7
TAR627G0707 Trochodendron aralioides HOM05D005193 ORTHO05D006316 8.5e-296 1020.4 890 60.4
Gohir.A01G082500 Gossypium hirsutum HOM05D005193 ORTHO05D006316 2.7e-294 1015.4 911 58.6
RcHm_v2.0_Chr5g0040821 Rosa chinensis HOM05D005193 ORTHO05D006316 3.6e-294 1015.0 911 58.3
FAN11G0281 Fragaria x ananassa HOM05D005193 ORTHO05D006316 6.1e-294 1014.2 925 58.2
RhsimUnG0248800 Rhododendron simsii HOM05D005193 ORTHO05D006316 8.0e-294 1013.8 965 55.6
Gorai.002G091400 Gossypium raimondii HOM05D005193 ORTHO05D006316 1.8e-293 1012.7 912 58.4
Thecc.07G032100 Theobroma cacao HOM05D005193 ORTHO05D006316 8.8e-293 1010.4 911 58.8
Sabra16G0234700 Salix brachista HOM05D005193 ORTHO05D006316 2.6e-292 1008.8 928 58.0
Duzib268G1225 Durio zibethinus HOM05D005193 ORTHO05D006316 4.8e-291 1004.6 912 58.2
Prupe.4G218100 Prunus persica HOM05D005193 ORTHO05D006316 2.4e-290 1002.3 855 61.3
TWI38G1184 Tripterygium wilfordii HOM05D005193 ORTHO05D006316 2.4e-290 1002.3 916 57.0
CANSAT11G2467 Cannabis sativa HOM05D005193 ORTHO05D006316 2.3e-288 995.7 913 57.8
Hma1.2p1_0036F.1_g023390 Hydrangea macrophylla HOM05D005193 ORTHO05D006316 6.6e-288 994.2 886 58.0
Nn1g03454 Nelumbo nucifera HOM05D005193 ORTHO05D006316 3.6e-286 988.4 912 57.7
Haze_09711 Corylus avellana HOM05D005193 ORTHO05D006316 2.6e-284 982.2 893 58.3
FAN21G2135 Fragaria x ananassa HOM05D005193 ORTHO05D006316 3.7e-283 978.4 910 57.0
FAN16G1885 Fragaria x ananassa HOM05D005193 ORTHO05D006316 5.4e-282 974.5 882 58.4
COL.COLO4_09693 Corchorus olitorius HOM05D005193 ORTHO05D006316 1.5e-276 956.4 961 55.2
PSO832G1529 Papaver somniferum HOM05D005193 ORTHO05D006316 2.2e-267 926.0 915 53.6
PSO210G7537 Papaver somniferum HOM05D005193 ORTHO05D006316 1.1e-266 923.7 916 53.5
Manes.15G068700 Manihot esculenta HOM05D005193 ORTHO05D006316 4.1e-266 921.8 780 60.9
FAN25G0346 Fragaria x ananassa HOM05D005193 ORTHO05D006316 1.3e-264 916.8 991 51.9
CsaV3_7G021980 Cucumis sativus L. HOM05D005193 ORTHO05D006316 9.5e-263 910.6 910 52.9
MELO3C013149.2 Cucumis melo HOM05D005193 ORTHO05D006316 2.8e-262 909.1 910 52.9
Lsat_1_v5_gn_7_111080 Lactuca sativa HOM05D005193 ORTHO05D006316 4.9e-259 898.3 911 51.2
GSVIVG01037690001 Vitis vinifera HOM05D005193 ORTHO05D006316 7.1e-258 894.4 730 61.6
Aqoxy4G01697 Aquilegia oxysepala HOM05D005193 ORTHO05D006316 1.9e-255 886.3 917 52.0
MBI07_g09089_MAGBIO Magnolia biondii HOM05D005193 ORTHO05D006316 8.1e-254 880.9 932 52.1
PGR031G1204 Punica granatum HOM05D005193 ORTHO05D006316 8.1e-254 880.9 910 52.4
Aqoxy1G03394 Aquilegia oxysepala HOM05D005193 ORTHO05D006316 3.1e-253 879.0 921 51.5
Sed0015549 Sechium edule HOM05D005193 ORTHO05D006316 4.2e-250 868.6 911 51.4
ECA236G2682 Erigeron canadensis HOM05D005193 ORTHO05D006316 1.0e-248 864.0 914 50.2
FAN25G2894 Fragaria x ananassa HOM05D005193 ORTHO05D006316 1.0e-248 864.0 945 51.2
FvH4_3g23170 Fragaria vesca HOM05D005193 ORTHO05D006316 1.1e-247 860.5 737 61.3
Sopen12g001090 Solanum pennellii HOM05D005193 ORTHO05D006316 7.3e-247 857.8 920 50.0
Cc05_g14020 Coffea canephora HOM05D005193 ORTHO05D006316 1.4e-245 853.6 911 49.4
HanXRQChr11g0335911 Helianthus annuus HOM05D005193 ORTHO05D006316 2.6e-244 849.4 869 50.1
MSTRG.6941 Avicennia marina HOM05D005193 ORTHO05D006316 1.3e-243 847.0 912 49.3
Carub.0001s3976 Capsella rubella HOM05D005193 ORTHO05D006316 1.4e-242 843.6 903 51.3
Sp1g37570 Schrenkiella parvula HOM05D005193 ORTHO05D006316 2.7e-241 839.3 901 51.6
AT1G50730 Arabidopsis thaliana HOM05D005193 ORTHO05D006316 6.6e-240 834.7 904 50.6
BraA06t23495Z Brassica rapa HOM05D005193 ORTHO05D006316 3.8e-235 818.9 922 49.9
THA.LOC104816145 Tarenaya hassleriana HOM05D005193 ORTHO05D006316 6.4e-235 818.1 908 48.9
Migut.M01736 Erythranthe guttata HOM05D005193 ORTHO05D006316 1.0e-232 810.8 898 48.8
A06p02890 Brassica napus HOM05D005193 ORTHO05D006316 3.9e-232 808.9 911 49.9
Eucgr.F03483 Eucalyptus grandis HOM05D005193 ORTHO05D006316 3.9e-232 808.9 793 54.4
BcaB07g33512 Brassica carinata HOM05D005193 ORTHO05D006316 4.3e-231 805.4 914 49.8
BcaC08g43253 Brassica carinata HOM05D005193 ORTHO05D006316 3.1e-229 799.3 909 49.6
C06p05990 Brassica napus HOM05D005193 ORTHO05D006316 1.1e-223 780.8 914 48.9
Aa31LG10G3620 Aethionema arabicum HOM05D005193 ORTHO05D006316 8.2e-222 774.6 904 48.3
Thhalv10011218m.g Eutrema salsugineum HOM05D005193 ORTHO05D006316 5.8e-220 768.5 923 48.1
CARHR040830 Cardamine hirsuta HOM05D005193 ORTHO05D006316 7.1e-218 761.5 838 50.5
Oeu041839.1 Olea europaea HOM05D005193 ORTHO05D006316 2.3e-216 756.5 761 51.9
Ah.06g182590 Amaranthus hybridus HOM05D005193 ORTHO05D006316 1.5e-212 743.8 914 45.3
BolC6t35712H Brassica oleracea HOM05D005193 ORTHO05D006316 2.9e-203 713.0 944 45.9
AUR62020399 Chenopodium quinoa HOM05D005193 ORTHO05D006316 1.7e-198 697.2 840 47.4
Lalb_Chr17g0348621 Lupinus albus HOM05D005193 ORTHO05D006316 3.5e-196 689.5 492 73.0
AUR62015820 Chenopodium quinoa HOM05D005193 ORTHO05D006316 5.2e-192 675.6 906 43.8
ClCG09G010950 Citrullus lanatus HOM05D005193 ORTHO05D006316 3.5e-188 662.9 962 42.4
Peaxi162Scf00660g00118 Petunia axillaris HOM05D005193 ORTHO05D006316 2.1e-185 653.7 647 53.2
Cpa.g.sc12.274 Carica papaya HOM05D005193 ORTHO05D006316 1.8e-184 650.6 650 55.2
arahy.Tifrunner.gnm1.ann1.6PV7EE Arachis hypogaea HOM05D005193 ORTHO05D006316 9.1e-181 638.3 423 77.8
vmacro09699 Vaccinium macrocarpon HOM05D005193 ORTHO05D006316 1.8e-173 614.0 499 62.7
HPP92_008858 Vanilla planifolia HOM05D005193 ORTHO05D006316 5.0e-171 605.9 876 42.0
Hund02018 Selenicereus undatus HOM05D005193 ORTHO05D006316 1.9e-170 604.0 966 38.6
Pp3c16_8580 Physcomitrium patens HOM05D005193 ORTHO05D006316 8.0e-161 572.0 847 39.2
Mapoly0038s0063 Marchantia polymorpha HOM05D005193 ORTHO05D006316 1.2e-156 558.1 867 37.8
Lalb_Chr17g0348631 Lupinus albus HOM05D005193 ORTHO05D006316 2.3e-155 553.9 386 75.6
Nitab4.5_0000168g0220 Nicotiana tabacum HOM05D005193 ORTHO05D006316 9.2e-149 531.9 505 54.9
SMO115G0237 Selaginella moellendorffii HOM05D005193 ORTHO05D006316 1.4e-141 508.1 909 36.5
CSS0020168 Camellia sinensis var. sinensis HOM05D005193 ORTHO05D006316 2.7e-132 477.2 479 53.0
arahy.Tifrunner.gnm1.ann1.89LBMG Arachis hypogaea HOM05D005193 ORTHO05D006316 6.9e-128 462.6 315 76.5
CBR_g49709 Chara braunii HOM05D005193 ORTHO05D000048 4.9e-126 456.4 910 34.4
Nitab4.5_0003450g0040 Nicotiana tabacum HOM05D005193 ORTHO05D006316 2.9e-118 430.6 554 46.8
AagrBONN_evm.TU.Sc2ySwM_344.2169 Anthoceros agrestis HOM05D005193 ORTHO05D006316 8.1e-113 412.5 644 39.4
Lj1C877G15 Lonicera japonica HOM05D005193 ORTHO05D006316 5.8e-111 406.4 415 53.3
ATR0585G046 Amborella trichopoda HOM05D005193 ORTHO05D006316 1.0e-102 379.0 358 54.2
Lj1C877G9 Lonicera japonica HOM05D005193 ORTHO05D006316 2.3e-83 314.7 268 60.8
CDE02G4624 Ceratophyllum demersum HOM05D005193 ORTHO05D006316 1.2e-79 302.4 377 46.2
Nitab4.5_0003450g0030 Nicotiana tabacum HOM05D005193 ORTHO05D006316 7.2e-77 293.1 408 40.7
arahy.Tifrunner.gnm1.ann1.DP08C5 Arachis hypogaea HOM05D005193 ORTHO05D006316 1.6e-76 292.0 251 62.9
arahy.Tifrunner.gnm1.ann1.SW2PFC Arachis hypogaea HOM05D005193 ORTHO05D006316 1.6e-76 292.0 251 62.9
SalBow8G4471 Salvia bowleyana HOM05D005193 ORTHO05D006316 9.1e-56 223.0 426 31.9
AUR62015822 Chenopodium quinoa HOM05D005193 ORTHO05D006316 8.0e-52 209.9 536 30.6
Nitab4.5_0000168g0230 Nicotiana tabacum HOM05D005193 ORTHO05D006316 1.8e-48 198.7 211 47.4
CDE02G0254 Ceratophyllum demersum HOM05D005193 ORTHO05D006316 9.5e-45 186.4 291 39.5
Solyc12g005090.3 Solanum lycopersicum HOM05D005193 ORTHO05D006316 3.1e-43 181.4 203 45.8
CAN.G1219.3 Capsicum annuum HOM05D005193 ORTHO05D006316 4.0e-43 181.0 160 51.9
Lsat_1_v5_gn_6_67380 Lactuca sativa HOM05D005193 ORTHO05D006316 1.2e-42 179.5 192 50.0
Lsat_1_v5_gn_9_67960 Lactuca sativa HOM05D005193 ORTHO05D006316 1.2e-42 179.5 192 50.0
Gorai.011G223800 Gossypium raimondii HOM05D005193 ORTHO05D006316 4.4e-34 151.0 168 47.0
CDE02G0065 Ceratophyllum demersum HOM05D005193 ORTHO05D006316 8.3e-33 146.7 192 42.7
arahy.Tifrunner.gnm1.ann1.BLY3DW Arachis hypogaea HOM05D005193 ORTHO05D006316 9.2e-32 143.3 102 72.5
Peaxi162Scf00660g00119 Petunia axillaris HOM05D005193 ORTHO05D006316 1.1e-27 129.8 162 43.8
ATR0585G123 Amborella trichopoda HOM05D005193 ORTHO05D006316 2.6e-26 125.2 170 40.6
AagrBONN_evm.TU.Sc2ySwM_362.1473 Anthoceros agrestis HOM05D005193 ORTHO05D006316 3.4e-26 124.8 110 58.2
Sabra06G0024500 Salix brachista HOM05D005193 ORTHO05D006316 3.7e-25 121.3 84 69.0
TPR.G2800 Trifolium pratense HOM05D005193 ORTHO05D006316 3.7e-25 121.3 109 65.1
Sabra16G0098300 Salix brachista HOM05D005193 ORTHO05D006316 2.4e-24 118.6 82 69.5
CDE02G4589 Ceratophyllum demersum HOM05D005193 ORTHO05D006316 5.4e-24 117.5 240 35.0
Gohir.D10G199632 Gossypium hirsutum HOM05D005193 ORTHO05D006316 6.0e-23 114.0 137 43.1
EL10Ac4g07765 Beta vulgaris HOM05D005193 ORTHO05D006316 1.7e-22 112.5 186 38.7
Haze_09712 Corylus avellana HOM05D005193 ORTHO05D006316 1.5e-21 109.4 117 56.4
Gorai.001G274400 Gossypium raimondii HOM05D005193 ORTHO05D006316 6.8e-19 100.5 124 42.7
CSS0028155 Camellia sinensis var. sinensis HOM05D005193 ORTHO05D006316 8.9e-19 100.1 90 55.6
CSS0039097 Camellia sinensis var. sinensis HOM05D005193 ORTHO05D006316 8.9e-19 100.1 87 57.5
Aqoxy4G00029 Aquilegia oxysepala HOM05D002071 ORTHO05D002109 4.4e-18 97.8 108 44.4
ATR0585G071 Amborella trichopoda HOM05D005193 ORTHO05D006316 1.7e-17 95.9 138 38.4
MD16G1253600 Malus domestica HOM05D005193 ORTHO05D006316 1.1e-16 93.2 62 72.6
CAN.G1219.2 Capsicum annuum HOM05D005193 ORTHO05D006316 1.9e-16 92.4 94 55.3
SalBow8G0199 Salvia bowleyana HOM05D005193 ORTHO05D006316 1.9e-16 92.4 94 51.1
Cpa.g.sc12.275 Carica papaya HOM05D005193 ORTHO05D006316 4.2e-16 91.3 95 46.3
CSS0047254 Camellia sinensis var. sinensis HOM05D005193 ORTHO05D006316 7.1e-16 90.5 203 34.5
Cpa.g.sc12.273 Carica papaya HOM05D005193 ORTHO05D006316 2.1e-15 89.0 111 49.5
Oeu041837.1 Olea europaea HOM05D005193 ORTHO05D006316 2.1e-15 89.0 95 47.4
Gohir.D08G017066 Gossypium hirsutum HOM05D005193 ORTHO05D006316 1.3e-14 86.3 75 57.3
GSVIVG01037691001 Vitis vinifera HOM05D005193 ORTHO05D006316 1.1e-13 83.2 111 49.5
Eucgr.F03486 Eucalyptus grandis HOM05D005193 ORTHO05D006316 1.3e-12 79.7 111 45.9
TPR.G2798 Trifolium pratense HOM05D005193 ORTHO05D006316 1.6e-12 79.3 74 63.5
SEGI_26698 Sequoiadendron giganteum HOM05D005193 ORTHO05D006316 2.8e-12 78.6 96 39.6
SEGI_10601 Sequoiadendron giganteum HOM05D005193 ORTHO05D006316 1.3e-09 69.7 74 39.2
SEGI_35263 Sequoiadendron giganteum HOM05D005193 ORTHO05D006316 7.1e-08 63.9 60 51.7
CDE02G4328 Ceratophyllum demersum HOM05D005193 ORTHO05D006316 1.2e-07 63.2 79 43.0
SEGI_24122 Sequoiadendron giganteum HOM05D005193 ORTHO05D006316 3.9e-06 58.2 77 37.7


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