Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.008G269700 Phaseolus vulgaris HOM05D007542 ORTHO05D009519 1.6e-95 352.8 184 100.0
VMungo0647G1207 Vigna mungo HOM05D007542 ORTHO05D009519 9.6e-61 237.3 194 71.6
Glyma.14G021700 Glycine max HOM05D007542 ORTHO05D009519 8.4e-49 197.6 185 66.5
Medtr5g093430 Medicago truncatula HOM05D007542 ORTHO05D009519 1.2e-42 177.2 192 55.7
LjContig00272g0021523 Lotus japonicus HOM05D007542 ORTHO05D009519 4.2e-40 168.7 193 55.4
Medtr5g093440 Medicago truncatula HOM05D007542 ORTHO05D009519 1.5e-37 160.2 192 52.6
TPR.G17892 Trifolium pratense HOM05D007542 ORTHO05D009519 3.3e-37 159.1 194 52.1
TPR.G1179 Trifolium pratense HOM05D007542 ORTHO05D009519 2.8e-36 156.0 194 51.5
arahy.Tifrunner.gnm1.ann1.C8UBJW Arachis hypogaea HOM05D007542 ORTHO05D009519 1.8e-35 153.3 180 55.6
arahy.Tifrunner.gnm1.ann1.T42YYR Arachis hypogaea HOM05D007542 ORTHO05D009519 2.4e-35 152.9 180 55.0
Lalb_Chr04g0248281 Lupinus albus HOM05D007542 ORTHO05D009519 6.9e-35 151.4 192 53.6
Phvul.006G046800 Phaseolus vulgaris HOM05D007542 ORTHO05D009519 1.0e-33 147.5 196 52.0
Psat2g012360 Pisum sativum HOM05D007542 ORTHO05D009519 3.8e-33 145.6 188 48.4
Lj6g0015208 Lotus japonicus HOM05D007542 ORTHO05D009519 2.5e-32 142.9 194 49.0
Glyma.18G092800 Glycine max HOM05D007542 ORTHO05D009519 5.5e-32 141.7 192 49.0
QL08p006891 Quercus lobata HOM05D007542 ORTHO05D009519 2.7e-31 139.4 195 47.2
Manes.03G133100 Manihot esculenta HOM05D007542 ORTHO05D009519 4.6e-31 138.7 196 50.0
Psat2g012400 Pisum sativum HOM05D007542 ORTHO05D009519 7.9e-31 137.9 191 48.2
TWI38G0725 Tripterygium wilfordii HOM05D007542 ORTHO05D009519 1.8e-30 136.7 190 47.9
CSS0027066 Camellia sinensis var. sinensis HOM05D007542 ORTHO05D009519 2.3e-30 136.3 213 45.5
Dinv22244 Davidia involucrata HOM05D007542 ORTHO05D009519 8.7e-30 134.4 183 47.5
Glyma.08G319700 Glycine max HOM05D007542 ORTHO05D009519 1.1e-29 134.0 194 47.4
Cfa020302 Carpinus fangiana HOM05D007542 ORTHO05D009519 1.3e-28 130.6 211 43.6
Hma1.2p1_1332F.1_g276050 Hydrangea macrophylla HOM05D007542 ORTHO05D009519 1.6e-28 130.2 193 45.6
Cpa.g.sc12.265 Carica papaya HOM05D007542 ORTHO05D009519 2.8e-28 129.4 207 45.4
Duzib170G0581 Durio zibethinus HOM05D007542 ORTHO05D009519 3.7e-28 129.0 190 48.4
GSVIVG01037700001 Vitis vinifera HOM05D007542 ORTHO05D009519 6.3e-28 128.3 190 45.8
Thecc.07G031100 Theobroma cacao HOM05D007542 ORTHO05D009519 1.4e-27 127.1 188 46.3
Ciclev10009585m.g Citrus clementina HOM05D007542 ORTHO05D009519 2.4e-27 126.3 193 49.2
Eucgr.F00716 Eucalyptus grandis HOM05D007542 ORTHO05D009519 3.1e-27 125.9 199 43.7
Ca_06340_v3 Cicer arietinum L. HOM05D007542 ORTHO05D009519 4.1e-27 125.6 186 45.2
TAR643G0006 Trochodendron aralioides HOM05D007542 ORTHO05D009519 4.1e-27 125.6 188 45.7
Ca_25812_v3 Cicer arietinum L. HOM05D007542 ORTHO05D009519 6.9e-27 124.8 185 44.3
RcHm_v2.0_Chr5g0040991 Rosa chinensis HOM05D007542 ORTHO05D009519 6.9e-27 124.8 205 42.9
arahy.Tifrunner.gnm1.ann1.ENS6UV Arachis hypogaea HOM05D007542 ORTHO05D009519 1.2e-26 124.0 191 42.9
COL.COLO4_09703 Corchorus olitorius HOM05D007542 ORTHO05D009519 1.5e-26 123.6 190 44.2
Potri.011G087000 Populus trichocarpa HOM05D007542 ORTHO05D009519 1.5e-26 123.6 204 44.1
FAN16G3720 Fragaria x ananassa HOM05D007542 ORTHO05D009519 3.4e-26 122.5 204 42.6
FvH4_3g23270 Fragaria vesca HOM05D007542 ORTHO05D009519 4.5e-26 122.1 204 42.2
FAN21G0453 Fragaria x ananassa HOM05D007542 ORTHO05D009519 4.5e-26 122.1 204 42.6
Nn1g03444 Nelumbo nucifera HOM05D007542 ORTHO05D009519 5.9e-26 121.7 198 42.9
FAN25G0364 Fragaria x ananassa HOM05D007542 ORTHO05D009519 7.7e-26 121.3 199 42.2
FAN25G1685 Fragaria x ananassa HOM05D007542 ORTHO05D009519 7.7e-26 121.3 199 42.2
Lj6g0001233 Lotus japonicus HOM05D007542 ORTHO05D009519 2.2e-25 119.8 234 39.3
Atru.chr2.3499 Acer truncatum HOM05D007542 ORTHO05D009519 2.9e-25 119.4 208 44.7
Dinv40786 Davidia involucrata HOM05D007542 ORTHO05D009519 3.8e-25 119.0 171 46.8
Prupe.4G220200 Prunus persica HOM05D007542 ORTHO05D009519 3.8e-25 119.0 197 43.7
Sabra11G0071000 Salix brachista HOM05D007542 ORTHO05D009519 5.0e-25 118.6 199 43.7
TAR626G0917 Trochodendron aralioides HOM05D007542 ORTHO05D009519 1.4e-24 117.1 179 43.0
Medtr3g053160 Medicago truncatula HOM05D007542 ORTHO05D009519 3.2e-24 115.9 183 44.3
MELO3C014190.2 Cucumis melo HOM05D007542 ORTHO05D009519 5.5e-24 115.2 192 41.7
Gorai.002G092100 Gossypium raimondii HOM05D007542 ORTHO05D009519 5.5e-24 115.2 190 43.2
Prupe.4G220300 Prunus persica HOM05D007542 ORTHO05D009519 7.2e-24 114.8 204 43.1
FAN11G1962 Fragaria x ananassa HOM05D007542 ORTHO05D009519 9.4e-24 114.4 194 41.8
CsaV3_3G004930 Cucumis sativus L. HOM05D007542 ORTHO05D009519 1.2e-23 114.0 194 41.8
Gohir.D01G069700 Gossypium hirsutum HOM05D007542 ORTHO05D009519 1.6e-23 113.6 190 43.2
Cc05_g14120 Coffea canephora HOM05D007542 ORTHO05D009519 2.7e-23 112.8 197 43.7
CiPaw.11G192900 Carya illinoinensis HOM05D007542 ORTHO05D009519 1.0e-22 110.9 196 43.4
MD03G1195800 Malus domestica HOM05D007542 ORTHO05D009519 5.1e-22 108.6 201 42.8
Actinidia05075 Actinidia chinensis HOM05D007542 ORTHO05D009519 6.7e-22 108.2 178 43.8
MSTRG.6947 Avicennia marina HOM05D007542 ORTHO05D009519 1.1e-21 107.5 204 40.2
MD11G1212200 Malus domestica HOM05D007542 ORTHO05D009519 1.1e-21 107.5 199 42.7
VMungo0540G1120 Vigna mungo HOM05D007542 ORTHO05D009519 1.1e-21 107.5 187 42.8
TAR624G0015 Trochodendron aralioides HOM05D007542 ORTHO05D009519 1.5e-21 107.1 183 44.3
DCAR_016720 Daucus carota HOM05D007542 ORTHO05D009519 5.7e-21 105.1 205 40.5
Nn1g07236 Nelumbo nucifera HOM05D007542 ORTHO05D009519 5.7e-21 105.1 194 40.7
Rhsim06G0222000 Rhododendron simsii HOM05D007542 ORTHO05D009519 7.4e-21 104.8 172 43.6
MBI10_g09179_MAGBIO Magnolia biondii HOM05D007542 ORTHO05D009519 1.7e-20 103.6 178 41.6
Aqoxy1G03049 Aquilegia oxysepala HOM05D007542 ORTHO05D009519 8.2e-20 101.3 191 40.3
CAN.G492.20 Capsicum annuum HOM05D007542 ORTHO05D009519 6.9e-19 98.2 200 42.0
Nitab4.5_0000328g0130 Nicotiana tabacum HOM05D007542 ORTHO05D009519 1.5e-18 97.1 191 40.3
PGSC0003DMG400014384 Solanum tuberosum HOM05D007542 ORTHO05D009519 4.5e-18 95.5 203 41.9
Hma1.2p1_3935F.1_g338010 Hydrangea macrophylla HOM05D007542 ORTHO05D009519 1.3e-17 94.0 151 43.0
Sc03g0008420 Simmondsia chinensis HOM05D007542 ORTHO05D009519 1.7e-17 93.6 175 41.1
Oeu026398.1 Olea europaea HOM05D007542 ORTHO05D009519 3.8e-17 92.4 203 36.0
MSTRG.12988 Avicennia marina HOM05D007542 ORTHO05D009519 8.5e-17 91.3 177 39.5
Oeu008012.1 Olea europaea HOM05D007542 ORTHO05D009519 8.5e-17 91.3 181 37.0
Sc16g0005830 Simmondsia chinensis HOM05D007542 ORTHO05D009519 8.5e-17 91.3 193 39.4
Sopen07g033030 Solanum pennellii HOM05D007542 ORTHO05D009519 1.1e-16 90.9 183 38.8
PGSC0003DMG400022335 Solanum tuberosum HOM05D007542 ORTHO05D009519 1.9e-16 90.1 162 40.1
Glyma.02G293000 Glycine max HOM05D007542 ORTHO05D009519 9.4e-16 87.8 172 44.8
Migut.H01805 Erythranthe guttata HOM05D007542 ORTHO05D009519 2.1e-15 86.7 177 40.1
Solyc10g006150.3 Solanum lycopersicum HOM05D007542 ORTHO05D009519 3.6e-15 85.9 188 39.4
CAN.G337.69 Capsicum annuum HOM05D007542 ORTHO05D009519 7.9e-15 84.7 178 39.3
Manes.15G067900 Manihot esculenta HOM05D007542 ORTHO05D009519 7.9e-15 84.7 155 42.6
Nitab4.5_0002826g0080 Nicotiana tabacum HOM05D007542 ORTHO05D009519 1.8e-14 83.6 196 37.8
Lj1P878T38 Lonicera japonica HOM05D007542 ORTHO05D009519 2.3e-14 83.2 159 43.4
PSO541G2394 Papaver somniferum HOM05D007542 ORTHO05D009519 1.1e-13 80.9 219 34.2
Aqoxy1G03452 Aquilegia oxysepala HOM05D007542 ORTHO05D009519 7.7e-10 68.2 142 35.9
Peaxi162Scf00235g00059 Petunia axillaris HOM05D007542 ORTHO05D009519 1.3e-09 67.4 164 36.6
Nitab4.5_0004829g0120 Nicotiana tabacum HOM05D007542 ORTHO05D009519 1.9e-08 63.5 169 39.1
EL10Ac4g07752 Beta vulgaris HOM05D007542 ORTHO05D009519 2.7e-07 59.7 210 31.0
Gohir.A01G083201 Gossypium hirsutum HOM05D007542 ORTHO05D009519 3.6e-07 59.3 73 46.6
CDE08G0529 Ceratophyllum demersum HOM05D007542 ORTHO05D009519 6.7e-06 55.1 138 29.0
Sopen10g002100 Solanum pennellii HOM05D007542 ORTHO05D009519 6.7e-06 55.1 90 47.8
ATR0772G056 Amborella trichopoda HOM05D007542 ORTHO05D009519 8.8e-06 54.7 63 44.4


User provided reference genes

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