Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.008G267300 Phaseolus vulgaris HOM05D006489 ORTHO05D007556 1.3e-304 1048.9 537 100.0
VMungo0647G1504 Vigna mungo HOM05D006489 ORTHO05D007556 2.9e-251 871.7 540 84.3
Glyma.02G290600 Glycine max HOM05D006489 ORTHO05D007556 1.4e-205 719.9 543 72.9
Glyma.14G024100 Glycine max HOM05D006489 ORTHO05D007556 7.6e-159 564.7 458 66.4
TPR.G1166 Trifolium pratense HOM05D006489 ORTHO05D007556 2.1e-132 476.9 562 51.2
LjContig00272g0011286 Lotus japonicus HOM05D006489 ORTHO05D007556 1.3e-129 467.6 569 52.7
Medtr5g092580 Medicago truncatula HOM05D006489 ORTHO05D007556 3.1e-128 463.0 600 49.7
Ca_06317_v3 Cicer arietinum L. HOM05D006489 ORTHO05D007556 8.3e-121 438.3 550 50.5
Lalb_Chr17g0348451 Lupinus albus HOM05D006489 ORTHO05D007556 1.4e-107 394.4 637 43.3
Ca_25386_v3 Cicer arietinum L. HOM05D006489 ORTHO05D007556 8.9e-107 391.7 551 48.3
Psat2g011040 Pisum sativum HOM05D006489 ORTHO05D007556 2.6e-106 390.2 569 48.0
Lalb_Chr10g0106941 Lupinus albus HOM05D006489 ORTHO05D007556 3.4e-106 389.8 438 54.6
arahy.Tifrunner.gnm1.ann1.I0Q6ZZ Arachis hypogaea HOM05D006489 ORTHO05D007556 1.2e-103 381.3 616 45.6
arahy.Tifrunner.gnm1.ann1.X6VDEX Arachis hypogaea HOM05D006489 ORTHO05D007556 1.2e-95 354.8 627 44.8
TPR.G36685 Trifolium pratense HOM05D006489 ORTHO05D007556 2.0e-95 354.0 578 44.3
Medtr6g033325 Medicago truncatula HOM05D006489 ORTHO05D007556 3.5e-95 353.2 615 43.7
Haze_09673 Corylus avellana HOM05D006489 ORTHO05D007556 8.6e-94 348.6 579 42.0
Cfa020351 Carpinus fangiana HOM05D006489 ORTHO05D007556 3.5e-87 326.6 612 40.7
CiPaw.12G129400 Carya illinoinensis HOM05D006489 ORTHO05D007556 1.3e-81 308.1 577 38.5
QL08p010454 Quercus lobata HOM05D006489 ORTHO05D007556 2.4e-80 303.9 555 41.4
Psat1g097920 Pisum sativum HOM05D006489 ORTHO05D007556 1.1e-75 288.5 670 37.0
Duzib213G0414 Durio zibethinus HOM05D006489 ORTHO05D007556 1.4e-75 288.1 574 37.5
Ciclev10008166m.g Citrus clementina HOM05D006489 ORTHO05D007556 3.8e-73 280.0 599 36.7
vmacro09717 Vaccinium macrocarpon HOM05D006489 ORTHO05D007556 1.6e-71 274.6 567 38.3
TAR627G0165 Trochodendron aralioides HOM05D006489 ORTHO05D007556 5.1e-70 269.6 570 37.4
Sabra11G0125100 Salix brachista HOM05D006489 ORTHO05D007556 8.7e-70 268.9 601 36.6
COL.COLO4_19762 Corchorus olitorius HOM05D006489 ORTHO05D007556 1.6e-68 264.6 513 38.2
TWI15G0832 Tripterygium wilfordii HOM05D006489 ORTHO05D007556 2.8e-68 263.8 582 35.9
Actinidia35341 Actinidia chinensis HOM05D006489 ORTHO05D007556 6.4e-65 252.7 589 36.2
Prupe.4G212300 Prunus persica HOM05D006489 ORTHO05D007556 3.2e-64 250.4 589 34.8
Gohir.D08G030200 Gossypium hirsutum HOM05D006489 ORTHO05D007556 5.4e-64 249.6 569 36.2
Cpa.g.sc97.9 Carica papaya HOM05D006489 ORTHO05D007556 2.1e-63 247.7 568 35.0
Potri.011G139200 Populus trichocarpa HOM05D006489 ORTHO05D007556 2.1e-63 247.7 584 34.4
Gorai.004G027700 Gossypium raimondii HOM05D006489 ORTHO05D007556 3.5e-63 246.9 577 36.4
Dinv22265 Davidia involucrata HOM05D006489 ORTHO05D007556 3.9e-62 243.4 559 36.1
Manes.03G129000 Manihot esculenta HOM05D006489 ORTHO05D007556 4.0e-59 233.4 584 34.6
Peaxi162Scf00964g00023 Petunia axillaris HOM05D006489 ORTHO05D007556 4.0e-59 233.4 566 36.0
CSS0036232 Camellia sinensis var. sinensis HOM05D006489 ORTHO05D007556 9.0e-59 232.3 504 36.1
Atru.chr2.3342 Acer truncatum HOM05D006489 ORTHO05D007556 4.5e-58 229.9 349 42.7
CSS0017234 Camellia sinensis var. sinensis HOM05D006489 ORTHO05D007556 1.3e-57 228.4 505 36.4
RhsimUnG0250900 Rhododendron simsii HOM05D006489 ORTHO05D007556 2.2e-57 227.6 462 37.9
Gohir.A08G019600 Gossypium hirsutum HOM05D006489 ORTHO05D007556 2.9e-57 227.3 570 35.8
Sed0018772 Sechium edule HOM05D006489 ORTHO05D007556 2.9e-57 227.3 575 36.0
CANSAT11G2482 Cannabis sativa HOM05D006489 ORTHO05D007556 2.1e-55 221.1 607 34.1
Hma1.2p1_1162F.1_g262610 Hydrangea macrophylla HOM05D006489 ORTHO05D007556 2.7e-55 220.7 584 34.2
DCAR_022559 Daucus carota HOM05D006489 ORTHO05D007556 3.5e-55 220.3 566 34.5
Oeu062694.1 Olea europaea HOM05D006489 ORTHO05D007556 4.6e-55 219.9 554 35.2
MELO3C013233.2 Cucumis melo HOM05D006489 ORTHO05D007556 1.3e-54 218.4 577 36.7
ClCG05G014300 Citrullus lanatus HOM05D006489 ORTHO05D007556 1.3e-52 211.8 561 34.8
MD03G1201600 Malus domestica HOM05D006489 ORTHO05D007556 1.6e-52 211.5 586 34.5
FAN25G3282 Fragaria x ananassa HOM05D006489 ORTHO05D007556 2.1e-52 211.1 490 35.3
MBI18_g45561_MAGBIO Magnolia biondii HOM05D006489 ORTHO05D007556 4.8e-52 209.9 583 33.4
Solyc07g064570.3 Solanum lycopersicum HOM05D006489 ORTHO05D007556 8.1e-52 209.1 581 35.3
FvH4_3g22630 Fragaria vesca HOM05D006489 ORTHO05D007556 4.0e-51 206.8 437 36.6
Sopen07g032750 Solanum pennellii HOM05D006489 ORTHO05D007556 4.0e-51 206.8 582 34.7
CAN.G337.129 Capsicum annuum HOM05D006489 ORTHO05D007556 5.8e-50 203.0 497 35.0
Cc09_g09720 Coffea canephora HOM05D006489 ORTHO05D007556 5.8e-50 203.0 512 34.2
MBI02_g07154_MAGBIO Magnolia biondii HOM05D006489 ORTHO05D007556 5.8e-50 203.0 558 35.1
PGSC0003DMG400022321 Solanum tuberosum HOM05D006489 ORTHO05D007556 7.6e-50 202.6 578 34.3
FAN21G0022 Fragaria x ananassa HOM05D006489 ORTHO05D007556 1.0e-49 202.2 435 37.0
GSVIVG01037644001 Vitis vinifera HOM05D006489 ORTHO05D007556 1.0e-49 202.2 567 33.5
HanXRQChr03g0076541 Helianthus annuus HOM05D006489 ORTHO05D007556 1.9e-48 198.0 578 34.8
RcHm_v2.0_Chr5g0039401 Rosa chinensis HOM05D006489 ORTHO05D007556 2.5e-48 197.6 498 33.7
Nitab4.5_0001913g0140 Nicotiana tabacum HOM05D006489 ORTHO05D007556 4.2e-48 196.8 519 35.6
Nitab4.5_0011175g0010 Nicotiana tabacum HOM05D006489 ORTHO05D007556 1.6e-47 194.9 518 34.6
AUR62015766 Chenopodium quinoa HOM05D006489 ORTHO05D007556 2.7e-47 194.1 612 31.0
Aqoxy1G03602 Aquilegia oxysepala HOM05D006489 ORTHO05D007556 6.0e-47 193.0 559 33.1
CDE02G1695 Ceratophyllum demersum HOM05D006489 ORTHO05D007556 3.0e-46 190.7 575 32.2
Eucgr.F00766 Eucalyptus grandis HOM05D006489 ORTHO05D007556 5.1e-46 189.9 446 33.0
Lsat_1_v5_gn_9_94040 Lactuca sativa HOM05D006489 ORTHO05D007556 6.7e-46 189.5 578 31.8
PGR083G1541 Punica granatum HOM05D006489 ORTHO05D007556 1.5e-45 188.3 545 32.8
AL3G34270 Arabidopsis lyrata HOM05D006489 ORTHO05D007556 1.9e-45 188.0 568 32.9
Hund23251 Selenicereus undatus HOM05D006489 ORTHO05D007556 2.5e-45 187.6 520 33.3
Atru.BG.151.p Acer truncatum HOM05D006489 ORTHO05D007556 3.3e-45 187.2 459 32.9
Migut.M01768 Erythranthe guttata HOM05D006489 ORTHO05D007556 4.3e-45 186.8 503 34.2
EL10Ac4g07823 Beta vulgaris HOM05D006489 ORTHO05D007556 7.4e-45 186.0 596 31.2
CsaV3_7G021220 Cucumis sativus L. HOM05D006489 ORTHO05D007556 9.6e-45 185.7 537 34.8
ECA240G0124 Erigeron canadensis HOM05D006489 ORTHO05D007556 2.1e-44 184.5 583 32.6
Sc03g0008610 Simmondsia chinensis HOM05D006489 ORTHO05D007556 2.1e-44 184.5 452 33.4
Hma1.2p1_1162F.1_g262600 Hydrangea macrophylla HOM05D006489 ORTHO05D007556 8.2e-44 182.6 460 35.2
AT3G20490 Arabidopsis thaliana HOM05D006489 ORTHO05D007556 1.1e-43 182.2 574 31.9
CARHR096250 Cardamine hirsuta HOM05D006489 ORTHO05D007556 1.1e-43 182.2 582 33.3
CDE05G3553 Ceratophyllum demersum HOM05D006489 ORTHO05D007556 1.4e-43 181.8 573 30.4
ATR0752G219 Amborella trichopoda HOM05D006489 ORTHO05D007556 2.4e-43 181.0 519 32.4
BcaB06g27045 Brassica carinata HOM05D006489 ORTHO05D007556 3.1e-43 180.6 568 31.9
HanXRQChr08g0220561 Helianthus annuus HOM05D006489 ORTHO05D007556 6.9e-43 179.5 573 32.3
Nn1g03547 Nelumbo nucifera HOM05D006489 ORTHO05D007556 6.9e-43 179.5 571 30.5
Carub.0003s2045 Capsella rubella HOM05D006489 ORTHO05D007556 1.2e-42 178.7 552 31.2
Aa31LG8G7280 Aethionema arabicum HOM05D006489 ORTHO05D007556 4.5e-42 176.8 574 31.2
Lj1A872T56 Lonicera japonica HOM05D006489 ORTHO05D007556 4.5e-42 176.8 420 33.6
SGA_v2.0_scaffold80G25948 Striga asiatica HOM05D006489 ORTHO05D007556 4.5e-42 176.8 497 33.4
C04p43850 Brassica napus HOM05D006489 ORTHO05D007556 1.0e-41 175.6 632 31.0
BcaC02g09533 Brassica carinata HOM05D006489 ORTHO05D007556 8.5e-41 172.6 632 30.9
BolC4t25966H Brassica oleracea HOM05D006489 ORTHO05D007556 8.5e-41 172.6 632 30.9
A04p10340 Brassica napus HOM05D006489 ORTHO05D007556 1.4e-40 171.8 638 31.0
Sed0021471 Sechium edule HOM05D006489 ORTHO05D007556 1.2e-39 168.7 449 34.7
THA.LOC104817868 Tarenaya hassleriana HOM05D006489 ORTHO05D007556 1.6e-39 168.3 552 30.3
Thecc.07G037900 Theobroma cacao HOM05D006489 ORTHO05D007556 4.6e-39 166.8 398 35.7
BraA04t16706Z Brassica rapa HOM05D006489 ORTHO05D007556 9.7e-37 159.1 568 31.5
AUR62020449 Chenopodium quinoa HOM05D006489 ORTHO05D007556 2.5e-32 144.4 517 29.2
Sp7g05570 Schrenkiella parvula HOM05D006489 ORTHO05D007556 7.2e-32 142.9 675 27.9
PSO675G7358 Papaver somniferum HOM05D006489 ORTHO05D007556 9.4e-32 142.5 391 33.8
PSO541G0970 Papaver somniferum HOM05D006489 ORTHO05D007556 8.8e-30 136.0 535 30.1
FAN16G1490 Fragaria x ananassa HOM05D006489 ORTHO05D007556 3.3e-29 134.0 296 37.2
HPP92_013323 Vanilla planifolia HOM05D006489 ORTHO05D007556 1.8e-27 128.3 606 26.6
Lsat_1_v5_gn_7_108561 Lactuca sativa HOM05D006489 ORTHO05D007556 2.6e-26 124.4 218 41.3
Thhalv10028177m.g Eutrema salsugineum HOM05D006489 ORTHO05D007556 1.7e-25 121.7 546 27.5
HanXRQChr11g0337701 Helianthus annuus HOM05D006489 ORTHO05D007556 8.5e-25 119.4 263 35.4
SEGI_05401 Sequoiadendron giganteum HOM05D006489 ORTHO05D007556 5.2e-22 110.2 609 27.1
ECA236G1547 Erigeron canadensis HOM05D006489 ORTHO05D007556 5.7e-21 106.7 230 36.1
Zm00001eb431300 Zea mays HOM05D006489 ORTHO05D007556 2.2e-20 104.8 521 26.3
unitig_62.g23281 Utricularia gibba HOM05D008272 ORTHO05D010429 1.1e-16 92.4 532 26.9
Os04g0625100 Oryza sativa ssp. japonica HOM05D006489 ORTHO05D007556 1.5e-16 92.0 492 25.0
Psat0s2568g0040 Pisum sativum HOM05D006489 ORTHO05D007556 1.2e-15 89.0 109 49.5
Lj8A169G92 Lonicera japonica HOM05D006489 ORTHO05D007556 4.8e-12 77.0 63 60.3
Actinidia10733 Actinidia chinensis HOM05D006489 ORTHO05D007556 2.2e-09 68.2 226 29.6


User provided reference genes

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