Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.008G262500 Phaseolus vulgaris HOM05D010371 ORTHO05D003507 2.1e-59 232.3 123 100.0
VMungo0647G2148 Vigna mungo HOM05D010371 ORTHO05D003507 2.1e-56 222.2 123 95.1
Glyma.02G225600 Glycine max HOM05D010371 ORTHO05D003507 2.0e-54 215.7 123 91.9
Glyma.14G192400 Glycine max HOM05D010371 ORTHO05D003507 1.3e-53 213.0 123 89.4
Ca_05588_v3 Cicer arietinum L. HOM05D010371 ORTHO05D003507 4.6e-43 177.9 123 75.6
TPR.G24023 Trifolium pratense HOM05D010371 ORTHO05D003507 7.9e-43 177.2 122 77.9
LjContig00155g0017503 Lotus japonicus HOM05D010371 ORTHO05D003507 9.6e-41 170.2 123 74.0
Psat2g059280 Pisum sativum HOM05D010371 ORTHO05D003507 1.1e-39 166.8 114 77.2
Medtr5g069980 Medicago truncatula HOM05D010371 ORTHO05D003507 6.9e-39 164.1 121 75.2
Lalb_Chr10g0103281 Lupinus albus HOM05D010371 ORTHO05D003507 1.4e-36 156.4 129 68.2
arahy.Tifrunner.gnm1.ann1.N7G3Q4 Arachis hypogaea HOM05D010371 ORTHO05D003507 2.4e-36 155.6 117 73.5
arahy.Tifrunner.gnm1.ann1.0452KN Arachis hypogaea HOM05D010371 ORTHO05D003507 3.2e-36 155.2 117 73.5
Lalb_Chr04g0252311 Lupinus albus HOM05D010371 ORTHO05D003507 6.9e-31 137.5 125 65.6
Glyma.18G065800 Glycine max HOM05D010371 ORTHO05D003507 1.2e-27 126.7 117 59.8
Phvul.006G065200 Phaseolus vulgaris HOM05D010371 ORTHO05D003507 1.5e-25 119.8 117 57.3
Glyma.11G176100 Glycine max HOM05D010371 ORTHO05D003507 1.3e-24 116.7 117 55.6
Lj6g0011323 Lotus japonicus HOM05D010371 ORTHO05D003507 1.3e-24 116.7 122 54.9
VMungo0540G0421 Vigna mungo HOM05D010371 ORTHO05D003507 4.1e-23 111.7 108 58.3
TPR.G13269 Trifolium pratense HOM05D010371 ORTHO05D003507 8.5e-21 104.0 120 50.0
Medtr3g462980 Medicago truncatula HOM05D010371 ORTHO05D003507 3.6e-19 98.6 121 50.4
Ca_14912_v3 Cicer arietinum L. HOM05D010371 ORTHO05D003507 5.1e-18 94.7 109 54.1
Medtr3g462960 Medicago truncatula HOM05D010371 ORTHO05D003507 2.8e-16 89.0 108 50.0
CiPaw.14G060900 Carya illinoinensis HOM05D004233 ORTHO05D003507 1.1e-12 77.0 98 51.0
COL.COLO4_14571 Corchorus olitorius HOM05D004233 ORTHO05D003507 1.2e-11 73.6 126 42.1
Ciclev10013109m.g Citrus clementina HOM05D004233 ORTHO05D003507 6.1e-11 71.2 112 41.1
Haze_24266 Corylus avellana HOM05D004233 ORTHO05D003507 7.9e-11 70.9 94 50.0
Glyma.07G146500 Glycine max HOM05D004233 ORTHO05D003507 3.9e-10 68.6 114 39.5
Hma1.2p1_0763F.1_g214800 Hydrangea macrophylla HOM05D004233 ORTHO05D003507 3.9e-10 68.6 92 44.6
Nn2g13635 Nelumbo nucifera HOM05D004233 ORTHO05D003507 6.7e-10 67.8 111 41.4
Dinv37074 Davidia involucrata HOM05D004233 ORTHO05D003507 8.8e-10 67.4 81 50.6
Phvul.008G106800 Phaseolus vulgaris HOM05D004233 ORTHO05D003507 8.8e-10 67.4 115 39.1
Rhsim13G0071800 Rhododendron simsii HOM05D004233 ORTHO05D003507 8.8e-10 67.4 108 40.7
VMungo1383G3137 Vigna mungo HOM05D004233 ORTHO05D003507 1.5e-09 66.6 115 38.3
Actinidia25149 Actinidia chinensis HOM05D004233 ORTHO05D003507 2.0e-09 66.2 109 38.5
Glyma.03G078400 Glycine max HOM05D004233 ORTHO05D003507 2.0e-09 66.2 109 40.4
Gohir.D01G215600 Gossypium hirsutum HOM05D004233 ORTHO05D003507 3.3e-09 65.5 74 55.4
Gorai.002G261800 Gossypium raimondii HOM05D004233 ORTHO05D003507 3.3e-09 65.5 74 55.4
Phvul.010G005000 Phaseolus vulgaris HOM05D004233 ORTHO05D003507 3.3e-09 65.5 82 45.1
Peaxi162Scf00056g00201 Petunia axillaris HOM05D004233 ORTHO05D003507 4.4e-09 65.1 98 38.8
Potri.006G097700 Populus trichocarpa HOM05D004233 ORTHO05D003507 4.4e-09 65.1 118 40.7
Hma1.2p1_0227F.1_g096330 Hydrangea macrophylla HOM05D004233 ORTHO05D003507 5.7e-09 64.7 108 38.9
QL01p037420 Quercus lobata HOM05D004233 ORTHO05D003507 5.7e-09 64.7 92 47.8
CiPaw.13G080500 Carya illinoinensis HOM05D004233 ORTHO05D003507 7.4e-09 64.3 102 44.1
Duzib106G0630 Durio zibethinus HOM05D004233 ORTHO05D003507 7.4e-09 64.3 119 41.2
QL07p036016 Quercus lobata HOM05D004233 ORTHO05D003507 7.4e-09 64.3 119 37.8
Thecc.05G020400 Theobroma cacao HOM05D004233 ORTHO05D003507 7.4e-09 64.3 123 37.4
Cfa017246 Carpinus fangiana HOM05D004233 ORTHO05D003507 9.7e-09 63.9 120 40.8
Atru.chr8.2208 Acer truncatum HOM05D004233 ORTHO05D003507 1.3e-08 63.5 96 44.8
Cc01_g13980 Coffea canephora HOM05D004233 ORTHO05D003507 1.3e-08 63.5 108 36.1
Glyma.01G113100 Glycine max HOM05D004233 ORTHO05D003507 1.3e-08 63.5 82 43.9
VMungo0331G0885 Vigna mungo HOM05D004233 ORTHO05D003507 1.3e-08 63.5 114 39.5
Gohir.A01G225900 Gossypium hirsutum HOM05D004233 ORTHO05D003507 1.7e-08 63.2 74 52.7
Manes.09G103100 Manihot esculenta HOM05D004233 ORTHO05D003507 2.2e-08 62.8 83 44.6
Gohir.A09G163800 Gossypium hirsutum HOM05D004233 ORTHO05D003507 3.7e-08 62.0 120 40.0
Lsat_1_v5_gn_9_20140 Lactuca sativa HOM05D004233 ORTHO05D003507 3.7e-08 62.0 97 45.4
Gohir.D09G159300 Gossypium hirsutum HOM05D004233 ORTHO05D003507 4.8e-08 61.6 121 38.0
Gorai.006G181000 Gossypium raimondii HOM05D004233 ORTHO05D003507 4.8e-08 61.6 121 38.0
Sabra06G0075200 Salix brachista HOM05D004233 ORTHO05D003507 4.8e-08 61.6 125 35.2
TAR623G0525 Trochodendron aralioides HOM05D004233 ORTHO05D003507 4.8e-08 61.6 115 44.3
MSTRG.10228 Avicennia marina HOM05D004233 ORTHO05D003507 6.3e-08 61.2 121 34.7
ClCG10G021920 Citrullus lanatus HOM05D004233 ORTHO05D003507 8.2e-08 60.8 113 38.1
MELO3C009185.2 Cucumis melo HOM05D004233 ORTHO05D003507 8.2e-08 60.8 113 37.2
Sabra16G0108400 Salix brachista HOM05D004233 ORTHO05D003507 1.1e-07 60.5 112 38.4
Glyma.18G197700 Glycine max HOM05D004233 ORTHO05D003507 1.4e-07 60.1 96 40.6
Cpa.g.sc163.4 Carica papaya HOM05D004233 ORTHO05D003507 1.8e-07 59.7 77 44.2
Duzib093G0978 Durio zibethinus HOM05D004233 ORTHO05D003507 1.8e-07 59.7 118 39.8
Duzib128G0556 Durio zibethinus HOM05D004233 ORTHO05D003507 1.8e-07 59.7 119 40.3
C08p50660 Brassica napus HOM05D005325 ORTHO05D003507 2.4e-07 59.3 96 39.6
BolC8t52594H Brassica oleracea HOM05D005325 ORTHO05D003507 2.4e-07 59.3 96 39.6
BcaC07g42009 Brassica carinata HOM05D005325 ORTHO05D003507 3.1e-07 58.9 112 37.5
Duzib150G0257 Durio zibethinus HOM05D004233 ORTHO05D003507 3.1e-07 58.9 116 36.2
BraA09t41987Z Brassica rapa HOM05D005325 ORTHO05D003507 4.1e-07 58.5 123 35.8
Potri.001G249500 Populus trichocarpa HOM05D004233 ORTHO05D003507 4.1e-07 58.5 107 41.1
DCAR_007388 Daucus carota HOM05D004233 ORTHO05D003507 5.3e-07 58.2 99 38.4
Potri.016G112700 Populus trichocarpa HOM05D004233 ORTHO05D003507 5.3e-07 58.2 118 40.7
Sed0021305 Sechium edule HOM05D004233 ORTHO05D003507 5.3e-07 58.2 116 38.8
Aqoxy4G02651 Aquilegia oxysepala HOM05D004233 ORTHO05D003507 7.0e-07 57.8 81 46.9
C05p05370 Brassica napus HOM05D005325 ORTHO05D003507 7.0e-07 57.8 94 41.5
Nitab4.5_0000102g0150 Nicotiana tabacum HOM05D004233 ORTHO05D003507 7.0e-07 57.8 117 33.3
Nn1g02891 Nelumbo nucifera HOM05D004233 ORTHO05D003507 9.1e-07 57.4 115 35.7
Prupe.6G271900 Prunus persica HOM05D004233 ORTHO05D003507 1.5e-06 56.6 123 37.4
BraA10t42849Z Brassica rapa HOM05D005325 ORTHO05D003507 2.0e-06 56.2 94 40.4
Sed0017480 Sechium edule HOM05D004233 ORTHO05D003507 2.0e-06 56.2 68 47.1
Gohir.A05G089700 Gossypium hirsutum HOM05D004233 ORTHO05D003507 2.6e-06 55.8 120 38.3
Gohir.D05G090600 Gossypium hirsutum HOM05D004233 ORTHO05D003507 2.6e-06 55.8 120 38.3
Gohir.D07G106900 Gossypium hirsutum HOM05D004233 ORTHO05D003507 2.6e-06 55.8 113 40.7
Gorai.001G115000 Gossypium raimondii HOM05D004233 ORTHO05D003507 2.6e-06 55.8 113 40.7
Gorai.009G093100 Gossypium raimondii HOM05D004233 ORTHO05D003507 2.6e-06 55.8 120 38.3
Prupe.6G060400 Prunus persica HOM05D012510 ORTHO05D015115 2.6e-06 55.8 116 37.1
Rhsim04G0131700 Rhododendron simsii HOM05D004233 ORTHO05D003507 2.6e-06 55.8 87 43.7
Sp1g06050 Schrenkiella parvula HOM05D005325 ORTHO05D003507 2.6e-06 55.8 94 38.3
TWI77G0758 Tripterygium wilfordii HOM05D004233 ORTHO05D003507 2.6e-06 55.8 109 40.4
BcaC07g42458 Brassica carinata HOM05D005325 ORTHO05D003507 3.4e-06 55.5 94 40.4
BolC5t29309H Brassica oleracea HOM05D005325 ORTHO05D003507 3.4e-06 55.5 94 40.4
Ciclev10029412m.g Citrus clementina HOM05D004233 ORTHO05D003507 3.4e-06 55.5 98 43.9
Eucgr.K02995 Eucalyptus grandis HOM05D004233 ORTHO05D003507 4.5e-06 55.1 118 33.9
Thhalv10009101m.g Eutrema salsugineum HOM05D005325 ORTHO05D003507 4.5e-06 55.1 92 40.2
CARHR007020 Cardamine hirsuta HOM05D005325 ORTHO05D003507 5.9e-06 54.7 94 38.3
Lj6g0009965 Lotus japonicus HOM05D004233 ORTHO05D003507 5.9e-06 54.7 112 34.8
CiPaw.09G207200 Carya illinoinensis HOM05D004233 ORTHO05D003507 7.7e-06 54.3 115 36.5
TPR.G29052 Trifolium pratense HOM05D004233 ORTHO05D003507 7.7e-06 54.3 107 39.3


User provided reference genes

Program Settings