Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.008G257100 Phaseolus vulgaris HOM05D000139 ORTHO05D010351 7.8e-155 550.4 281 100.0
Phvul.008G257033 Phaseolus vulgaris HOM05D000139 ORTHO05D010351 1.0e-85 320.9 191 85.9
Phvul.008G257000 Phaseolus vulgaris HOM05D000139 ORTHO05D010351 1.5e-84 317.0 242 74.8
Phvul.008G256900 Phaseolus vulgaris HOM05D000139 ORTHO05D010351 1.9e-84 316.6 200 86.5
Phvul.001G122400 Phaseolus vulgaris HOM05D000139 ORTHO05D010351 8.0e-59 231.5 221 60.6
Glyma.17G240200 Glycine max HOM05D000139 ORTHO05D010351 1.7e-56 223.8 226 57.1
Glyma.02G231900 Glycine max HOM05D000139 ORTHO05D010351 9.2e-55 218.0 218 57.3
Glyma.06G200300 Glycine max HOM05D000139 ORTHO05D010351 2.3e-53 213.4 165 67.3
TPR.G27408 Trifolium pratense HOM05D000139 ORTHO05D010351 1.1e-50 204.5 204 56.4
Medtr5g073620 Medicago truncatula HOM05D000139 ORTHO05D010351 1.2e-49 201.1 199 58.8
TPR.G27407 Trifolium pratense HOM05D000139 ORTHO05D010351 6.4e-48 195.3 188 60.1
Phvul.008G167600 Phaseolus vulgaris HOM05D000139 ORTHO05D010351 1.4e-47 194.1 210 53.3
Phvul.008G252500 Phaseolus vulgaris HOM05D000139 ORTHO05D010351 1.4e-47 194.1 202 56.4
Medtr5g073840 Medicago truncatula HOM05D000139 ORTHO05D010351 4.1e-47 192.6 242 50.4
Psat2g054200 Pisum sativum HOM05D000139 ORTHO05D010351 5.4e-47 192.2 190 58.9
Medtr5g074130 Medicago truncatula HOM05D000139 ORTHO05D010351 7.0e-47 191.8 203 56.2
Medtr5g074450 Medicago truncatula HOM05D002545 ORTHO05D002335 1.7e-45 187.2 259 46.7
Phvul.008G252432 Phaseolus vulgaris HOM05D000139 ORTHO05D010351 2.3e-45 186.8 248 47.2
Ca_05658_v3 Cicer arietinum L. HOM05D000139 ORTHO05D010351 3.9e-45 186.0 239 49.4
Medtr5g073460 Medicago truncatula HOM05D000139 ORTHO05D000103 3.9e-45 186.0 208 52.9
Glyma.02G232000 Glycine max HOM05D000139 ORTHO05D010351 6.6e-45 185.3 245 47.3
Medtr5g073480 Medicago truncatula HOM05D000139 ORTHO05D010351 1.1e-44 184.5 230 47.8
Medtr5g093530 Medicago truncatula HOM05D000139 ORTHO05D010351 1.9e-44 183.7 203 53.7
arahy.Tifrunner.gnm1.ann1.6DK79V Arachis hypogaea HOM05D000139 ORTHO05D010351 7.3e-44 181.8 211 52.6
arahy.Tifrunner.gnm1.ann1.T11BLV Arachis hypogaea HOM05D000139 ORTHO05D000103 1.2e-43 181.0 185 54.1
Psat2g054880 Pisum sativum HOM05D000139 ORTHO05D010351 1.6e-43 180.6 194 54.6
arahy.Tifrunner.gnm1.ann1.5Y376T Arachis hypogaea HOM05D000139 ORTHO05D010351 4.0e-42 176.0 209 49.8
Glyma.14G199700 Glycine max HOM05D000139 ORTHO05D010351 8.9e-42 174.9 227 48.9
Medtr5g073920 Medicago truncatula HOM05D000139 ORTHO05D010351 8.9e-42 174.9 189 55.6
Medtr5g074190 Medicago truncatula HOM05D001165 ORTHO05D010351 8.9e-42 174.9 160 60.0
LjContig00141g0019613 Lotus japonicus HOM05D000139 ORTHO05D010351 1.5e-41 174.1 184 53.8
arahy.Tifrunner.gnm1.ann1.MWQM2H Arachis hypogaea HOM05D000139 ORTHO05D010351 2.6e-41 173.3 188 54.3
arahy.Tifrunner.gnm1.ann1.5S97B2 Arachis hypogaea HOM05D000139 ORTHO05D010351 3.4e-41 172.9 195 52.8
Phvul.008G252300 Phaseolus vulgaris HOM05D000139 ORTHO05D010351 1.7e-40 170.6 143 60.8
Medtr3g464010 Medicago truncatula HOM05D000139 ORTHO05D010351 3.7e-40 169.5 204 50.0
arahy.Tifrunner.gnm1.ann1.SDH2U8 Arachis hypogaea HOM05D000139 ORTHO05D010351 6.4e-40 168.7 198 52.0
arahy.Tifrunner.gnm1.ann1.47MQLD Arachis hypogaea HOM05D000139 ORTHO05D000103 1.1e-39 167.9 198 50.5
arahy.Tifrunner.gnm1.ann1.JG7RLL Arachis hypogaea HOM05D000139 ORTHO05D000103 1.4e-39 167.5 198 50.0
arahy.Tifrunner.gnm1.ann1.624Y80 Arachis hypogaea HOM05D000139 ORTHO05D010351 3.2e-39 166.4 188 52.7
Medtr5g074150 Medicago truncatula HOM05D000139 ORTHO05D010351 5.4e-39 165.6 175 53.7
Psat2g054640 Pisum sativum HOM05D000139 ORTHO05D000103 5.4e-39 165.6 230 47.0
Medtr5g073960 Medicago truncatula HOM05D000139 ORTHO05D010351 7.1e-39 165.2 237 44.3
arahy.Tifrunner.gnm1.ann1.GR7VGW Arachis hypogaea HOM05D000139 ORTHO05D010351 7.8e-38 161.8 195 51.3
LjContig00141g0001664 Lotus japonicus HOM05D000139 ORTHO05D000103 1.3e-37 161.0 161 58.4
LjContig00141g0005562 Lotus japonicus HOM05D000139 ORTHO05D010351 3.0e-37 159.8 202 49.0
Lalb_Chr10g0103531 Lupinus albus HOM05D000139 ORTHO05D010351 3.3e-36 156.4 181 50.8
Glyma.14G199600 Glycine max HOM05D000139 ORTHO05D010351 4.3e-36 156.0 177 52.0
Medtr5g073880 Medicago truncatula HOM05D000139 ORTHO05D010351 1.6e-35 154.1 189 47.6
Medtr5g074090 Medicago truncatula HOM05D000139 ORTHO05D010351 3.6e-35 152.9 157 55.4
Medtr5g073810 Medicago truncatula HOM05D000139 ORTHO05D010351 5.2e-34 149.1 224 42.9
Lalb_Chr05g0220931 Lupinus albus HOM05D000005 ORTHO05D000012 1.2e-33 147.9 176 48.3
Psat2g054760 Pisum sativum HOM05D000139 ORTHO05D014784 7.6e-33 145.2 186 46.8
Medtr5g073750 Medicago truncatula HOM05D000139 ORTHO05D010351 1.1e-31 141.4 192 45.3
Medtr5g073610 Medicago truncatula HOM05D000139 ORTHO05D010351 2.3e-29 133.7 208 45.7
Medtr5g073860 Medicago truncatula HOM05D000139 ORTHO05D010351 3.9e-29 132.9 202 42.6
arahy.Tifrunner.gnm1.ann1.DF7IVU Arachis hypogaea HOM05D000139 ORTHO05D010351 5.1e-29 132.5 234 38.5
Glyma.14G199800 Glycine max HOM05D000081 ORTHO05D014784 6.6e-29 132.1 190 45.8
Medtr5g073470 Medicago truncatula HOM05D000139 ORTHO05D010351 8.7e-29 131.7 228 42.1
Glyma.14G198401 Glycine max HOM05D000139 ORTHO05D213612 7.3e-28 128.6 149 53.7
Lalb_Chr10g0103581 Lupinus albus HOM05D000139 ORTHO05D010351 9.6e-28 128.3 136 54.4
Phvul.008G251800 Phaseolus vulgaris HOM05D000081 ORTHO05D014784 9.6e-28 128.3 182 44.5
Psat2g054920 Pisum sativum HOM05D000081 ORTHO05D014784 9.6e-28 128.3 199 45.2
Phvul.008G251700 Phaseolus vulgaris HOM05D000081 ORTHO05D014784 1.4e-26 124.4 202 42.1
TPR.G24967 Trifolium pratense HOM05D000081 ORTHO05D014784 6.9e-26 122.1 184 44.6
Medtr5g074070 Medicago truncatula HOM05D000139 ORTHO05D010351 9.0e-26 121.7 199 44.7
Ca_05667_v3 Cicer arietinum L. HOM05D000139 ORTHO05D022363 4.4e-25 119.4 217 37.3
Medtr5g074200 Medicago truncatula HOM05D000081 ORTHO05D014784 3.8e-24 116.3 184 43.5
TPR.G27412 Trifolium pratense HOM05D000139 ORTHO05D000103 6.4e-24 115.5 96 63.5
arahy.Tifrunner.gnm1.ann1.T74DGZ Arachis hypogaea HOM05D000139 ORTHO05D000103 3.9e-21 106.3 115 47.8
Medtr5g073660 Medicago truncatula HOM05D000139 ORTHO05D266772 5.1e-21 105.9 227 38.8
Medtr6g078770 Medicago truncatula HOM05D000139 ORTHO05D019269 6.6e-21 105.5 140 47.1
arahy.Tifrunner.gnm1.ann1.B7RGGF Arachis hypogaea HOM05D000139 ORTHO05D000103 1.1e-20 104.8 115 47.0
arahy.Tifrunner.gnm1.ann1.615JIB Arachis hypogaea HOM05D064904 ORTHO05D087328 2.1e-19 100.5 151 45.0
Psat1g119960 Pisum sativum HOM05D000139 ORTHO05D019269 3.6e-19 99.8 140 41.4
Lj2g0002486 Lotus japonicus HOM05D000005 ORTHO05D000012 6.2e-19 99.0 164 37.2
Lj2g0021893 Lotus japonicus HOM05D000139 ORTHO05D019269 6.2e-19 99.0 164 37.2
Medtr6g078610 Medicago truncatula HOM05D000005 ORTHO05D019269 1.1e-18 98.2 140 43.6
arahy.Tifrunner.gnm1.ann1.YM3EBM Arachis hypogaea HOM05D064904 ORTHO05D085231 1.8e-18 97.4 149 44.3
arahy.Tifrunner.gnm1.ann1.5L9Z02 Arachis hypogaea HOM05D000139 ORTHO05D026354 2.4e-18 97.1 258 32.2
arahy.Tifrunner.gnm1.ann1.1D3WUK Arachis hypogaea HOM05D000139 ORTHO05D083086 5.3e-18 95.9 149 45.6
Lalb_Chr16g0381761 Lupinus albus HOM05D000139 ORTHO05D020776 5.3e-18 95.9 159 41.5
Medtr5g073770 Medicago truncatula HOM05D000139 ORTHO05D010351 5.3e-18 95.9 236 38.1
Ca_30483_v3 Cicer arietinum L. HOM05D000139 ORTHO05D000103 2.6e-17 93.6 102 54.9
Lj2g0013383 Lotus japonicus HOM05D000139 ORTHO05D019269 4.5e-17 92.8 128 42.2
arahy.Tifrunner.gnm1.ann1.NCQ3Z1 Arachis hypogaea HOM05D000139 ORTHO05D000103 5.8e-17 92.4 206 33.5
arahy.Tifrunner.gnm1.ann1.47NBR1 Arachis hypogaea HOM05D002434 ORTHO05D082345 1.7e-16 90.9 256 31.2
Medtr5g073820 Medicago truncatula HOM05D000139 ORTHO05D010351 2.9e-16 90.1 226 34.5
Ca_05666_v3 Cicer arietinum L. HOM05D000139 ORTHO05D010351 3.2e-15 86.7 144 43.1
Medtr6g075870 Medicago truncatula HOM05D000005 ORTHO05D000012 4.2e-15 86.3 140 38.6
Medtr5g073830 Medicago truncatula HOM05D000139 ORTHO05D010351 1.2e-14 84.7 103 46.6
arahy.Tifrunner.gnm1.ann1.TWH6QD Arachis hypogaea HOM05D000139 ORTHO05D000103 2.1e-14 84.0 167 33.5
Glyma.01G024300 Glycine max HOM05D000139 ORTHO05D214621 3.0e-13 80.1 179 34.1
Ca_05668_v3 Cicer arietinum L. HOM05D000139 ORTHO05D010351 3.9e-13 79.7 140 41.4
Glyma.01G024500 Glycine max HOM05D000139 ORTHO05D020776 8.7e-13 78.6 163 33.7
Phvul.002G148200 Phaseolus vulgaris HOM05D000139 ORTHO05D020776 1.1e-12 78.2 163 36.2
arahy.Tifrunner.gnm1.ann1.DNP257 Arachis hypogaea HOM05D000139 ORTHO05D000103 7.4e-12 75.5 236 28.0
Medtr6g078620 Medicago truncatula HOM05D000139 ORTHO05D019269 2.8e-11 73.6 131 35.9
arahy.Tifrunner.gnm1.ann1.CL8DJC Arachis hypogaea HOM05D000139 ORTHO05D000103 3.7e-11 73.2 116 39.7
Glyma.02G040802 Glycine max HOM05D000139 ORTHO05D020776 4.8e-11 72.8 163 33.7
Medtr5g093540 Medicago truncatula HOM05D000139 ORTHO05D014784 6.2e-11 72.4 139 39.6
Medtr5g073650 Medicago truncatula HOM05D000139 ORTHO05D000103 4.0e-10 69.7 125 40.8
Psat2g054960 Pisum sativum HOM05D000139 ORTHO05D022363 5.3e-10 69.3 91 52.7
Phvul.002G148400 Phaseolus vulgaris HOM05D000139 ORTHO05D020776 1.2e-09 68.2 132 35.6
Phvul.008G252101 Phaseolus vulgaris HOM05D000139 ORTHO05D307574 2.0e-09 67.4 154 32.5
arahy.Tifrunner.gnm1.ann1.ZNXS72 Arachis hypogaea HOM05D028262 ORTHO05D085152 3.4e-09 66.6 197 29.4
Lalb_Chr16g0381701 Lupinus albus HOM05D000139 ORTHO05D020776 4.5e-09 66.2 100 41.0
arahy.Tifrunner.gnm1.ann1.9MX0BI Arachis hypogaea HOM05D028262 ORTHO05D085252 9.9e-09 65.1 207 28.0
Medtr4g023690 Medicago truncatula HOM05D000139 ORTHO05D264522 9.9e-09 65.1 62 51.6
arahy.Tifrunner.gnm1.ann1.1AIF95 Arachis hypogaea HOM05D000254 ORTHO05D000165 6.4e-08 62.4 145 38.6
Lalb_Chr17g0345331 Lupinus albus HOM05D000139 ORTHO05D000103 3.2e-07 60.1 59 54.2


User provided reference genes

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