Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.008G257033 Phaseolus vulgaris HOM05D000139 ORTHO05D010351 4.3e-121 438.0 216 100.0
Phvul.008G257100 Phaseolus vulgaris HOM05D000139 ORTHO05D010351 5.4e-87 324.7 191 85.9
Phvul.008G257000 Phaseolus vulgaris HOM05D000139 ORTHO05D010351 9.8e-73 277.3 194 75.8
Phvul.008G256900 Phaseolus vulgaris HOM05D000139 ORTHO05D010351 4.3e-68 261.9 153 87.6
Phvul.001G122400 Phaseolus vulgaris HOM05D000139 ORTHO05D010351 7.0e-63 244.6 175 72.6
Glyma.17G240200 Glycine max HOM05D000139 ORTHO05D010351 2.9e-56 222.6 161 67.7
Glyma.02G231900 Glycine max HOM05D000139 ORTHO05D010351 3.7e-56 222.2 161 69.6
Glyma.06G200300 Glycine max HOM05D000139 ORTHO05D010351 3.7e-56 222.2 165 68.5
Phvul.008G252500 Phaseolus vulgaris HOM05D000139 ORTHO05D010351 6.6e-53 211.5 162 66.7
Phvul.008G252432 Phaseolus vulgaris HOM05D000139 ORTHO05D010351 1.5e-52 210.3 161 65.8
TPR.G27408 Trifolium pratense HOM05D000139 ORTHO05D010351 1.5e-52 210.3 204 55.4
Phvul.008G167600 Phaseolus vulgaris HOM05D000139 ORTHO05D010351 9.5e-52 207.6 162 64.8
Glyma.02G232000 Glycine max HOM05D000139 ORTHO05D010351 6.2e-51 204.9 164 64.6
Medtr5g073620 Medicago truncatula HOM05D000139 ORTHO05D010351 1.5e-49 200.3 179 60.9
Medtr5g073840 Medicago truncatula HOM05D000139 ORTHO05D010351 9.9e-49 197.6 182 59.3
TPR.G27407 Trifolium pratense HOM05D000139 ORTHO05D010351 1.3e-48 197.2 200 56.0
Medtr5g074450 Medicago truncatula HOM05D002545 ORTHO05D002335 2.9e-48 196.1 163 63.2
Psat2g054200 Pisum sativum HOM05D000139 ORTHO05D010351 6.4e-48 194.9 162 64.2
Ca_05658_v3 Cicer arietinum L. HOM05D000139 ORTHO05D010351 8.4e-48 194.5 162 64.2
Medtr5g073480 Medicago truncatula HOM05D000139 ORTHO05D010351 8.4e-48 194.5 165 60.6
Medtr5g073460 Medicago truncatula HOM05D000139 ORTHO05D000103 1.6e-46 190.3 162 62.3
Medtr5g074130 Medicago truncatula HOM05D000139 ORTHO05D010351 6.0e-46 188.3 160 63.1
Medtr5g093530 Medicago truncatula HOM05D000139 ORTHO05D010351 1.5e-44 183.7 160 61.2
Medtr5g073920 Medicago truncatula HOM05D000139 ORTHO05D010351 5.6e-44 181.8 159 62.3
arahy.Tifrunner.gnm1.ann1.T11BLV Arachis hypogaea HOM05D000139 ORTHO05D000103 1.2e-43 180.6 178 53.9
arahy.Tifrunner.gnm1.ann1.6DK79V Arachis hypogaea HOM05D000139 ORTHO05D010351 1.6e-43 180.3 167 57.5
Glyma.14G199700 Glycine max HOM05D000139 ORTHO05D010351 3.6e-43 179.1 177 58.8
Psat2g054640 Pisum sativum HOM05D000139 ORTHO05D000103 2.4e-42 176.4 157 60.5
Psat2g054880 Pisum sativum HOM05D000139 ORTHO05D010351 2.4e-42 176.4 160 59.4
LjContig00141g0019613 Lotus japonicus HOM05D000139 ORTHO05D010351 5.2e-42 175.3 199 50.3
Medtr3g464010 Medicago truncatula HOM05D000139 ORTHO05D010351 5.2e-42 175.3 164 58.5
arahy.Tifrunner.gnm1.ann1.47MQLD Arachis hypogaea HOM05D000139 ORTHO05D000103 6.9e-42 174.9 178 53.4
arahy.Tifrunner.gnm1.ann1.MWQM2H Arachis hypogaea HOM05D000139 ORTHO05D010351 1.5e-41 173.7 161 58.4
Medtr5g074150 Medicago truncatula HOM05D000139 ORTHO05D010351 2.6e-41 172.9 160 55.6
Phvul.008G252300 Phaseolus vulgaris HOM05D000139 ORTHO05D010351 2.6e-41 172.9 143 59.4
arahy.Tifrunner.gnm1.ann1.JG7RLL Arachis hypogaea HOM05D000139 ORTHO05D000103 3.4e-41 172.6 178 52.8
LjContig00141g0005562 Lotus japonicus HOM05D000139 ORTHO05D010351 4.4e-41 172.2 162 58.0
Medtr5g074190 Medicago truncatula HOM05D001165 ORTHO05D010351 5.8e-41 171.8 160 59.4
arahy.Tifrunner.gnm1.ann1.5Y376T Arachis hypogaea HOM05D000139 ORTHO05D010351 9.9e-41 171.0 191 49.7
Medtr5g073960 Medicago truncatula HOM05D000139 ORTHO05D010351 1.3e-40 170.6 160 56.2
LjContig00141g0001664 Lotus japonicus HOM05D000139 ORTHO05D000103 8.4e-40 167.9 161 59.0
arahy.Tifrunner.gnm1.ann1.624Y80 Arachis hypogaea HOM05D000139 ORTHO05D010351 1.9e-39 166.8 161 56.5
arahy.Tifrunner.gnm1.ann1.5S97B2 Arachis hypogaea HOM05D000139 ORTHO05D010351 7.1e-39 164.9 161 54.0
Medtr5g073880 Medicago truncatula HOM05D000139 ORTHO05D010351 9.3e-39 164.5 155 56.1
Glyma.14G199600 Glycine max HOM05D000139 ORTHO05D010351 3.5e-38 162.5 177 53.1
arahy.Tifrunner.gnm1.ann1.SDH2U8 Arachis hypogaea HOM05D000139 ORTHO05D010351 7.8e-38 161.4 160 54.4
Medtr5g073810 Medicago truncatula HOM05D000139 ORTHO05D010351 2.3e-37 159.8 206 45.6
Medtr5g074090 Medicago truncatula HOM05D000139 ORTHO05D010351 5.1e-37 158.7 159 55.3
Lalb_Chr10g0103531 Lupinus albus HOM05D000139 ORTHO05D010351 5.6e-36 155.2 155 53.5
arahy.Tifrunner.gnm1.ann1.GR7VGW Arachis hypogaea HOM05D000139 ORTHO05D010351 7.3e-36 154.8 161 52.8
Lalb_Chr05g0220931 Lupinus albus HOM05D000005 ORTHO05D000012 1.6e-35 153.7 165 50.3
arahy.Tifrunner.gnm1.ann1.DF7IVU Arachis hypogaea HOM05D000139 ORTHO05D010351 3.1e-34 149.4 183 49.2
Medtr5g073750 Medicago truncatula HOM05D000139 ORTHO05D010351 5.8e-33 145.2 163 50.9
Medtr5g073610 Medicago truncatula HOM05D000139 ORTHO05D010351 2.2e-32 143.3 168 51.8
Psat2g054760 Pisum sativum HOM05D000139 ORTHO05D014784 2.9e-32 142.9 162 47.5
Glyma.14G199800 Glycine max HOM05D000081 ORTHO05D014784 1.1e-31 141.0 155 54.2
Medtr5g073470 Medicago truncatula HOM05D000139 ORTHO05D010351 5.4e-31 138.7 162 51.9
Psat2g054920 Pisum sativum HOM05D000081 ORTHO05D014784 1.6e-30 137.1 160 51.9
Medtr5g073860 Medicago truncatula HOM05D000139 ORTHO05D010351 6.0e-30 135.2 137 54.0
Phvul.008G251800 Phaseolus vulgaris HOM05D000081 ORTHO05D014784 1.0e-29 134.4 159 49.1
Lalb_Chr10g0103581 Lupinus albus HOM05D000139 ORTHO05D010351 3.0e-29 132.9 136 53.7
Phvul.008G251700 Phaseolus vulgaris HOM05D000081 ORTHO05D014784 3.9e-29 132.5 159 49.1
Medtr5g074070 Medicago truncatula HOM05D000139 ORTHO05D010351 5.1e-29 132.1 149 53.7
TPR.G24967 Trifolium pratense HOM05D000081 ORTHO05D014784 1.1e-28 131.0 160 47.5
Ca_05667_v3 Cicer arietinum L. HOM05D000139 ORTHO05D022363 1.9e-28 130.2 154 46.1
Glyma.14G198401 Glycine max HOM05D000139 ORTHO05D213612 7.4e-28 128.3 115 60.0
Medtr6g078770 Medicago truncatula HOM05D000139 ORTHO05D019269 1.6e-27 127.1 141 51.1
Medtr5g074200 Medicago truncatula HOM05D000081 ORTHO05D014784 8.1e-27 124.8 152 48.7
TPR.G27412 Trifolium pratense HOM05D000139 ORTHO05D000103 3.1e-26 122.9 96 65.6
Medtr6g078610 Medicago truncatula HOM05D000005 ORTHO05D019269 1.2e-25 120.9 140 47.9
Psat1g119960 Pisum sativum HOM05D000139 ORTHO05D019269 7.6e-25 118.2 141 45.4
Lj2g0002486 Lotus japonicus HOM05D000005 ORTHO05D000012 2.2e-24 116.7 162 42.6
Lj2g0021893 Lotus japonicus HOM05D000139 ORTHO05D019269 2.2e-24 116.7 162 42.6
arahy.Tifrunner.gnm1.ann1.5L9Z02 Arachis hypogaea HOM05D000139 ORTHO05D026354 1.1e-23 114.4 158 43.0
arahy.Tifrunner.gnm1.ann1.T74DGZ Arachis hypogaea HOM05D000139 ORTHO05D000103 1.1e-23 114.4 115 50.4
arahy.Tifrunner.gnm1.ann1.615JIB Arachis hypogaea HOM05D064904 ORTHO05D087328 1.4e-23 114.0 165 43.6
arahy.Tifrunner.gnm1.ann1.B7RGGF Arachis hypogaea HOM05D000139 ORTHO05D000103 3.2e-23 112.8 115 49.6
arahy.Tifrunner.gnm1.ann1.YM3EBM Arachis hypogaea HOM05D064904 ORTHO05D085231 7.1e-23 111.7 176 42.0
arahy.Tifrunner.gnm1.ann1.1D3WUK Arachis hypogaea HOM05D000139 ORTHO05D083086 2.3e-21 106.7 150 45.3
Medtr5g073660 Medicago truncatula HOM05D000139 ORTHO05D266772 3.9e-21 105.9 205 37.1
Medtr6g075870 Medicago truncatula HOM05D000005 ORTHO05D000012 8.7e-21 104.8 140 42.1
arahy.Tifrunner.gnm1.ann1.47NBR1 Arachis hypogaea HOM05D002434 ORTHO05D082345 1.5e-20 104.0 158 41.1
Lj2g0013383 Lotus japonicus HOM05D000139 ORTHO05D019269 1.5e-20 104.0 129 44.2
arahy.Tifrunner.gnm1.ann1.NCQ3Z1 Arachis hypogaea HOM05D000139 ORTHO05D000103 3.3e-20 102.8 192 34.9
Lalb_Chr16g0381761 Lupinus albus HOM05D000139 ORTHO05D020776 1.4e-18 97.4 161 39.8
Ca_30483_v3 Cicer arietinum L. HOM05D000139 ORTHO05D000103 2.4e-18 96.7 86 61.6
Medtr5g073820 Medicago truncatula HOM05D000139 ORTHO05D010351 6.9e-18 95.1 162 40.1
Medtr5g073770 Medicago truncatula HOM05D000139 ORTHO05D010351 2.0e-17 93.6 172 40.7
Medtr5g073830 Medicago truncatula HOM05D000139 ORTHO05D010351 2.6e-17 93.2 196 33.2
Phvul.002G148200 Phaseolus vulgaris HOM05D000139 ORTHO05D020776 1.0e-16 91.3 163 36.2
Glyma.01G024300 Glycine max HOM05D000139 ORTHO05D214621 8.4e-16 88.2 169 36.1
Glyma.01G024500 Glycine max HOM05D000139 ORTHO05D020776 8.4e-16 88.2 163 35.0
arahy.Tifrunner.gnm1.ann1.TWH6QD Arachis hypogaea HOM05D000139 ORTHO05D000103 1.9e-15 87.0 168 36.3
arahy.Tifrunner.gnm1.ann1.CL8DJC Arachis hypogaea HOM05D000139 ORTHO05D000103 3.2e-15 86.3 116 43.1
arahy.Tifrunner.gnm1.ann1.DNP257 Arachis hypogaea HOM05D000139 ORTHO05D000103 5.5e-15 85.5 168 35.7
Ca_05666_v3 Cicer arietinum L. HOM05D000139 ORTHO05D010351 5.5e-15 85.5 69 63.8
Glyma.02G040802 Glycine max HOM05D000139 ORTHO05D020776 2.1e-14 83.6 163 35.6
Ca_05668_v3 Cicer arietinum L. HOM05D000139 ORTHO05D010351 2.3e-13 80.1 64 65.6
Medtr5g093540 Medicago truncatula HOM05D000139 ORTHO05D014784 2.3e-13 80.1 140 40.7
Medtr5g073650 Medicago truncatula HOM05D000139 ORTHO05D000103 6.7e-13 78.6 108 45.4
Medtr6g078620 Medicago truncatula HOM05D000139 ORTHO05D019269 1.1e-12 77.8 131 37.4
Phvul.002G148400 Phaseolus vulgaris HOM05D000139 ORTHO05D020776 7.4e-12 75.1 132 35.6
Psat2g054960 Pisum sativum HOM05D000139 ORTHO05D022363 2.1e-11 73.6 81 50.6
Phvul.008G252101 Phaseolus vulgaris HOM05D000139 ORTHO05D307574 8.2e-11 71.6 106 42.5
Lalb_Chr16g0381701 Lupinus albus HOM05D000139 ORTHO05D020776 5.3e-10 68.9 102 39.2
Medtr4g023690 Medicago truncatula HOM05D000139 ORTHO05D264522 5.3e-10 68.9 62 53.2
Medtr6g078630 Medicago truncatula HOM05D000005 ORTHO05D019269 5.9e-09 65.5 80 48.8
Lalb_Chr17g0345331 Lupinus albus HOM05D000139 ORTHO05D000103 7.6e-09 65.1 58 55.2
Medtr5g073850 Medicago truncatula HOM05D000081 ORTHO05D014784 5.5e-07 58.9 87 46.0
arahy.Tifrunner.gnm1.ann1.1AIF95 Arachis hypogaea HOM05D000254 ORTHO05D000165 2.7e-06 56.6 75 48.0
Medtr5g073500 Medicago truncatula HOM05D000139 ORTHO05D029709 2.7e-06 56.6 72 47.2
LjContig00141g0009438 Lotus japonicus HOM05D000081 ORTHO05D014784 7.9e-06 55.1 75 42.7
Psat2g054680 Pisum sativum HOM05D000139 ORTHO05D029709 7.9e-06 55.1 44 54.5


User provided reference genes

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