Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.008G255700 Phaseolus vulgaris HOM05D007092 ORTHO05D008947 3.2e-189 664.8 320 100.0
VMungo0647G0167 Vigna mungo HOM05D007092 ORTHO05D008947 1.3e-169 599.7 320 89.7
Glyma.07G003900 Glycine max HOM05D007092 ORTHO05D008947 9.8e-146 520.4 315 79.4
Medtr4g006030 Medicago truncatula HOM05D007092 ORTHO05D008947 1.8e-139 499.6 323 73.4
TPR.G38753 Trifolium pratense HOM05D007092 ORTHO05D008947 2.3e-134 482.6 303 74.3
Lj3g0013116 Lotus japonicus HOM05D007092 ORTHO05D008947 3.3e-133 478.8 310 74.8
Ca_20954_v3 Cicer arietinum L. HOM05D007092 ORTHO05D008947 2.2e-129 466.1 316 71.2
arahy.Tifrunner.gnm1.ann1.U4SUAB Arachis hypogaea HOM05D007092 ORTHO05D008947 1.0e-126 457.2 303 71.6
arahy.Tifrunner.gnm1.ann1.2I6Q5Y Arachis hypogaea HOM05D007092 ORTHO05D008947 1.1e-125 453.8 306 70.6
Lalb_Chr04g0264731 Lupinus albus HOM05D007092 ORTHO05D008947 1.8e-123 446.4 331 68.3
Prupe.3G167100 Prunus persica HOM05D007092 ORTHO05D008947 7.9e-119 431.0 299 68.2
RcHm_v2.0_Chr2g0150121 Rosa chinensis HOM05D007092 ORTHO05D008947 5.1e-118 428.3 291 69.8
QL05p083231 Quercus lobata HOM05D007092 ORTHO05D008947 6.7e-118 427.9 257 77.0
MD09G1158700 Malus domestica HOM05D007092 ORTHO05D008947 1.9e-117 426.4 259 76.1
FvH4_6g37290 Fragaria vesca HOM05D007092 ORTHO05D008947 3.3e-117 425.6 307 65.8
Dinv37796 Davidia involucrata HOM05D007092 ORTHO05D008947 2.7e-111 406.0 278 67.6
Thecc.06G015800 Theobroma cacao HOM05D007092 ORTHO05D008947 1.0e-110 404.1 255 70.2
FAN02G1258 Fragaria x ananassa HOM05D007092 ORTHO05D008947 1.8e-110 403.3 342 58.5
Eucgr.F04011 Eucalyptus grandis HOM05D007092 ORTHO05D008947 8.7e-110 401.0 307 63.8
PGR102G2093 Punica granatum HOM05D007092 ORTHO05D008947 1.5e-109 400.2 258 70.9
CANSAT01G0482 Cannabis sativa HOM05D007092 ORTHO05D008947 2.5e-109 399.4 287 64.8
CSS0038887 Camellia sinensis var. sinensis HOM05D007092 ORTHO05D008947 4.8e-108 395.2 313 62.0
Atru.chr1.2779 Acer truncatum HOM05D007092 ORTHO05D008947 4.0e-107 392.1 257 68.1
Ciclev10026125m.g Citrus clementina HOM05D007092 ORTHO05D008947 4.0e-107 392.1 256 68.4
Solyc06g063230.3 Solanum lycopersicum HOM05D007092 ORTHO05D008947 9.0e-107 391.0 281 63.3
Actinidia21869 Actinidia chinensis HOM05D007092 ORTHO05D008947 2.6e-106 389.4 279 64.2
CsaV3_7G033820 Cucumis sativus L. HOM05D007092 ORTHO05D008947 2.6e-106 389.4 251 71.3
PGSC0003DMG400026517 Solanum tuberosum HOM05D007092 ORTHO05D008947 5.8e-106 388.3 281 63.3
GSVIVG01016136001 Vitis vinifera HOM05D007092 ORTHO05D008947 5.8e-106 388.3 313 59.7
Manes.01G181400 Manihot esculenta HOM05D007092 ORTHO05D008947 7.6e-106 387.9 306 62.1
Sopen06g022680 Solanum pennellii HOM05D007092 ORTHO05D008947 1.0e-105 387.5 260 66.9
Nn2g12583 Nelumbo nucifera HOM05D007092 ORTHO05D008947 1.1e-104 384.0 260 68.8
Hma1.2p1_1104F.1_g257360 Hydrangea macrophylla HOM05D007092 ORTHO05D008947 2.5e-104 382.9 261 67.4
Oeu049655.1 Olea europaea HOM05D007092 ORTHO05D008947 3.2e-104 382.5 256 68.8
Nitab4.5_0002661g0010 Nicotiana tabacum HOM05D007092 ORTHO05D008947 4.6e-103 378.6 252 67.9
ClCG09G001510 Citrullus lanatus HOM05D007092 ORTHO05D008947 3.9e-102 375.6 323 59.4
Cc04_g00380 Coffea canephora HOM05D007092 ORTHO05D008947 5.1e-102 375.2 267 65.2
TAR383G0306 Trochodendron aralioides HOM05D007092 ORTHO05D008947 8.7e-102 374.4 272 65.4
Nitab4.5_0008628g0030 Nicotiana tabacum HOM05D007092 ORTHO05D008947 1.5e-101 373.6 252 66.7
Lsat_1_v5_gn_5_137421 Lactuca sativa HOM05D007092 ORTHO05D008947 1.6e-100 370.2 272 59.2
Duzib160G0445 Durio zibethinus HOM05D007092 ORTHO05D008947 6.3e-100 368.2 258 65.1
Thhalv10018923m.g Eutrema salsugineum HOM05D007092 ORTHO05D008947 1.1e-99 367.5 250 65.2
Sed0004999 Sechium edule HOM05D007092 ORTHO05D008947 1.8e-99 366.7 234 73.1
PSO063G1240 Papaver somniferum HOM05D007092 ORTHO05D008947 3.1e-99 365.9 273 63.7
Aa31LG4G3360 Aethionema arabicum HOM05D007092 ORTHO05D008947 4.1e-99 365.5 250 63.2
Sp5g28050 Schrenkiella parvula HOM05D007092 ORTHO05D008947 9.0e-99 364.4 251 64.1
HanXRQChr10g0311491 Helianthus annuus HOM05D007092 ORTHO05D008947 1.2e-98 364.0 256 61.7
A02p18440 Brassica napus HOM05D007092 ORTHO05D008947 1.0e-97 360.9 265 60.4
BraA02t06883Z Brassica rapa HOM05D007092 ORTHO05D008947 1.0e-97 360.9 265 60.4
Peaxi162Scf00207g01537 Petunia axillaris HOM05D007092 ORTHO05D008947 1.0e-97 360.9 305 55.7
Sc12g0010950 Simmondsia chinensis HOM05D007092 ORTHO05D008947 1.7e-97 360.1 248 65.3
AT1G73090 Arabidopsis thaliana HOM05D007092 ORTHO05D008947 2.2e-97 359.8 250 62.4
Haze_15817 Corylus avellana HOM05D007092 ORTHO05D008947 2.9e-97 359.4 308 57.1
Aqoxy7G03199 Aquilegia oxysepala HOM05D007092 ORTHO05D008947 5.0e-97 358.6 274 61.3
BolC2t09103H Brassica oleracea HOM05D007092 ORTHO05D008947 1.1e-96 357.5 255 61.2
arahy.Tifrunner.gnm1.ann1.65RD4S Arachis hypogaea HOM05D007092 ORTHO05D008947 1.9e-96 356.7 206 77.7
AL2G32840 Arabidopsis lyrata HOM05D007092 ORTHO05D008947 2.5e-96 356.3 265 59.6
ECA234G1665 Erigeron canadensis HOM05D007092 ORTHO05D008947 5.5e-96 355.1 254 59.4
Carub.0002s1986 Capsella rubella HOM05D007092 ORTHO05D008947 1.2e-95 354.0 250 61.2
ATR0580G293 Amborella trichopoda HOM05D007092 ORTHO05D008947 1.6e-95 353.6 277 61.4
C02p30520 Brassica napus HOM05D007092 ORTHO05D008947 2.1e-95 353.2 251 61.4
Gohir.D10G007300 Gossypium hirsutum HOM05D007092 ORTHO05D008947 2.7e-95 352.8 236 66.9
Gorai.011G008000 Gossypium raimondii HOM05D007092 ORTHO05D008947 3.6e-95 352.4 233 67.8
COL.COLO4_22872 Corchorus olitorius HOM05D007092 ORTHO05D008947 1.3e-94 350.5 239 65.7
Gohir.A10G007400 Gossypium hirsutum HOM05D007092 ORTHO05D008947 3.0e-94 349.4 236 65.7
EL10Ac7g18225 Beta vulgaris HOM05D007092 ORTHO05D008947 5.1e-94 348.6 297 56.6
CARHR066060 Cardamine hirsuta HOM05D007092 ORTHO05D008947 1.1e-93 347.4 250 60.8
Migut.I01177 Erythranthe guttata HOM05D007092 ORTHO05D008947 9.7e-93 344.4 302 55.0
AUR62025584 Chenopodium quinoa HOM05D007092 ORTHO05D008947 3.7e-92 342.4 312 53.8
SalBow6G0042 Salvia bowleyana HOM05D007092 ORTHO05D008947 5.3e-91 338.6 316 51.6
THA.LOC104823333 Tarenaya hassleriana HOM05D007092 ORTHO05D008947 7.7e-90 334.7 248 63.3
MBI14_g30703_MAGBIO Magnolia biondii HOM05D007092 ORTHO05D008947 3.8e-89 332.4 304 55.9
Potri.010G250100 Populus trichocarpa HOM05D007092 ORTHO05D008947 1.0e-86 324.3 256 60.2
MELO3C024294.2 Cucumis melo HOM05D007092 ORTHO05D008947 1.8e-86 323.6 250 63.6
Sabra10G0194500 Salix brachista HOM05D007092 ORTHO05D008947 2.0e-85 320.1 256 59.4
Hund18612 Selenicereus undatus HOM05D007092 ORTHO05D008947 4.4e-85 318.9 305 54.4
HPP92_017449 Vanilla planifolia HOM05D007092 ORTHO05D008947 4.8e-84 315.5 259 55.6
unitig_748.g7475 Utricularia gibba HOM05D007092 ORTHO05D008947 4.8e-76 288.9 248 55.6
Lj6C21G9 Lonicera japonica HOM05D007092 ORTHO05D008947 5.9e-74 282.0 250 55.6
AUR62001368 Chenopodium quinoa HOM05D007092 ORTHO05D008947 7.7e-74 281.6 287 48.4
CDE07G2035 Ceratophyllum demersum HOM05D007092 ORTHO05D008947 5.0e-73 278.9 272 53.3
Psat7g263560 Pisum sativum HOM05D007092 ORTHO05D008947 9.7e-69 264.6 204 63.2
SGA_v2.0_scaffold122G33289 Striga asiatica HOM05D002895 ORTHO05D003286 9.7e-69 264.6 213 56.8
Mapoly0073s0046 Marchantia polymorpha HOM05D007092 ORTHO05D008947 2.8e-60 236.5 254 47.6
Lj6C3G1 Lonicera japonica HOM05D000076 ORTHO05D001279 1.4e-59 234.2 220 53.2
AagrBONN_evm.TU.Sc2ySwM_344.2112 Anthoceros agrestis HOM05D007092 ORTHO05D008947 8.6e-57 224.9 269 41.3
Cfa021192 Carpinus fangiana HOM05D007092 ORTHO05D008947 9.5e-56 221.5 138 70.3
Pp3c13_10570 Physcomitrium patens HOM05D007092 ORTHO05D008947 1.4e-54 217.6 258 41.5
Hund18613 Selenicereus undatus HOM05D007092 ORTHO05D008947 9.8e-53 211.5 181 54.7
arahy.Tifrunner.gnm1.ann1.NXC5E0 Arachis hypogaea HOM05D007092 ORTHO05D008947 3.8e-49 199.5 108 80.6
FAN09G2007 Fragaria x ananassa HOM05D007092 ORTHO05D008947 1.6e-47 194.1 163 60.1
SMO230G0107 Selaginella moellendorffii HOM05D007092 ORTHO05D008947 6.8e-46 188.7 246 39.4
Glyma.08G222700 Glycine max HOM05D007092 ORTHO05D008947 1.7e-41 174.1 89 89.9
arahy.Tifrunner.gnm1.ann1.DEI7NY Arachis hypogaea HOM05D007092 ORTHO05D008947 6.2e-39 165.6 85 82.4
C02p30540 Brassica napus HOM05D007092 ORTHO05D008947 2.4e-35 153.7 106 59.4
RcHm_v2.0_Chr1g0381181 Rosa chinensis HOM05D007092 ORTHO05D008947 5.6e-32 142.5 150 52.7
SMO336G0036 Selaginella moellendorffii HOM05D007092 ORTHO05D008947 1.1e-30 138.3 278 30.9
SEGI_20536 Sequoiadendron giganteum HOM05D007092 ORTHO05D008947 7.3e-24 115.5 83 60.2
arahy.Tifrunner.gnm1.ann1.QYJ7WZ Arachis hypogaea HOM05D007092 ORTHO05D008947 1.1e-22 111.7 73 71.2
arahy.Tifrunner.gnm1.ann1.TPQB3Q Arachis hypogaea HOM05D007092 ORTHO05D008947 1.1e-22 111.7 73 71.2
Lj6A3T47 Lonicera japonica HOM05D007092 ORTHO05D008947 3.4e-21 106.7 67 65.7
arahy.Tifrunner.gnm1.ann1.BLVE7G Arachis hypogaea HOM05D007092 ORTHO05D008947 7.6e-21 105.5 53 81.1
arahy.Tifrunner.gnm1.ann1.LQFB73 Arachis hypogaea HOM05D007092 ORTHO05D008947 7.6e-21 105.5 53 81.1
Cpa.g.sc1009.2 Carica papaya HOM05D007092 ORTHO05D008947 3.0e-17 93.6 71 59.2
arahy.Tifrunner.gnm1.ann1.KBSP04 Arachis hypogaea HOM05D002221 ORTHO05D002626 3.6e-15 86.7 57 70.2
arahy.Tifrunner.gnm1.ann1.R6H1XR Arachis hypogaea HOM05D002221 ORTHO05D002626 3.6e-15 86.7 57 70.2
arahy.Tifrunner.gnm1.ann1.AT2CXE Arachis hypogaea HOM05D007092 ORTHO05D008947 7.1e-11 72.4 43 69.8
BcaC07g40307 Brassica carinata HOM05D007092 ORTHO05D008947 9.3e-11 72.0 59 49.2
Actinidia38794 Actinidia chinensis HOM05D007092 ORTHO05D008947 2.1e-10 70.9 52 65.4
BcaB05g22026 Brassica carinata HOM05D007092 ORTHO05D008947 5.1e-09 66.2 63 44.4
Actinidia21637 Actinidia chinensis HOM05D007092 ORTHO05D008947 3.3e-08 63.5 61 45.9
SEGI_38624 Sequoiadendron giganteum HOM05D007092 ORTHO05D050975 7.3e-08 62.4 46 54.3
Cpa.g.sc3948.1 Carica papaya HOM05D007092 ORTHO05D008947 9.6e-08 62.0 32 81.2
Hund18614 Selenicereus undatus HOM05D007092 ORTHO05D008947 1.1e-06 58.5 47 59.6
SEGI_02665 Sequoiadendron giganteum HOM05D007092 ORTHO05D050975 5.3e-06 56.2 45 55.6
arahy.Tifrunner.gnm1.ann1.9CXT3Z Arachis hypogaea HOM05D035740 ORTHO05D082897 9.0e-06 55.5 41 63.4
arahy.Tifrunner.gnm1.ann1.C9SE0R Arachis hypogaea HOM05D035740 ORTHO05D086213 9.0e-06 55.5 41 63.4
arahy.Tifrunner.gnm1.ann1.CEJV2N Arachis hypogaea HOM05D035740 ORTHO05D082514 9.0e-06 55.5 41 63.4


User provided reference genes

Program Settings