Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.008G255100 Phaseolus vulgaris HOM05D000017 ORTHO05D000013 1.2e-33 146.0 75 100.0
Phvul.005G100300 Phaseolus vulgaris HOM05D000017 ORTHO05D000013 3.4e-12 74.7 60 61.7
VMungo0540G1299 Vigna mungo HOM05D000017 ORTHO05D000013 7.5e-12 73.6 54 61.1
VMungo1215G1165 Vigna mungo HOM05D000017 ORTHO05D000013 7.5e-12 73.6 59 61.0
TPR.G1787 Trifolium pratense HOM05D000017 ORTHO05D000013 2.2e-11 72.0 56 58.9
Lj6g0013797 Lotus japonicus HOM05D000017 ORTHO05D000013 1.1e-10 69.7 54 61.1
TPR.G14279 Trifolium pratense HOM05D000017 ORTHO05D000013 1.1e-10 69.7 58 55.2
Lj6g0025034 Lotus japonicus HOM05D000017 ORTHO05D000013 2.4e-10 68.6 54 59.3
VMungo1127G2186 Vigna mungo HOM05D000017 ORTHO05D000013 2.4e-10 68.6 56 53.6
TPR.G11122 Trifolium pratense HOM05D000017 ORTHO05D000013 4.1e-10 67.8 57 54.4
TPR.G31011 Trifolium pratense HOM05D000017 ORTHO05D000013 4.1e-10 67.8 57 54.4
TPR.G15353 Trifolium pratense HOM05D000017 ORTHO05D000013 3.5e-09 64.7 56 53.6
VMungo0720G0338 Vigna mungo HOM05D000017 ORTHO05D000013 5.9e-09 63.9 63 49.2
TPR.G36775 Trifolium pratense HOM05D000017 ORTHO05D000013 1.0e-08 63.2 57 52.6
Ca_01574_v3 Cicer arietinum L. HOM05D000017 ORTHO05D020438 1.7e-08 62.4 57 47.4
TPR.G26350 Trifolium pratense HOM05D000017 ORTHO05D000013 1.7e-08 62.4 57 52.6
TPR.G31961 Trifolium pratense HOM05D000017 ORTHO05D000013 3.8e-08 61.2 57 49.1
Sopen06g017080 Solanum pennellii HOM05D000017 ORTHO05D000013 5.0e-08 60.8 57 50.9
Sopen07g014380 Solanum pennellii HOM05D000017 ORTHO05D000013 5.0e-08 60.8 57 50.9
Sopen08g006100 Solanum pennellii HOM05D000017 ORTHO05D000013 5.0e-08 60.8 57 50.9
Sopen01g034980 Solanum pennellii HOM05D000017 ORTHO05D000013 8.5e-08 60.1 57 50.9
Sopen03g022260 Solanum pennellii HOM05D000017 ORTHO05D000013 8.5e-08 60.1 57 50.9
Sopen04g029950 Solanum pennellii HOM05D000017 ORTHO05D000013 8.5e-08 60.1 57 50.9
Ca_16174_v3 Cicer arietinum L. HOM05D000017 ORTHO05D000013 1.1e-07 59.7 57 47.4
Ca_20021_v3 Cicer arietinum L. HOM05D010632 ORTHO05D012807 1.1e-07 59.7 53 50.9
Ah.02g115090 Amaranthus hybridus HOM05D000017 ORTHO05D000013 1.9e-07 58.9 55 49.1
Ca_11445_v3 Cicer arietinum L. HOM05D000017 ORTHO05D020438 2.5e-07 58.5 57 45.6
Dinv10194 Davidia involucrata HOM05D000017 ORTHO05D009679 3.2e-07 58.2 56 48.2
Ca_22902_v3 Cicer arietinum L. HOM05D000017 ORTHO05D000013 5.5e-07 57.4 57 45.6
Dinv03568 Davidia involucrata HOM05D000017 ORTHO05D009679 5.5e-07 57.4 56 46.4
Ca_22995_v3 Cicer arietinum L. HOM05D000017 ORTHO05D007253 7.2e-07 57.0 53 47.2
Ca_25007_v3 Cicer arietinum L. HOM05D000017 ORTHO05D025024 7.2e-07 57.0 55 47.3
Medtr6g086685 Medicago truncatula HOM05D000017 ORTHO05D000013 9.4e-07 56.6 57 47.4
Medtr2g018850 Medicago truncatula HOM05D000017 ORTHO05D000013 1.2e-06 56.2 53 45.3
arahy.Tifrunner.gnm1.ann1.31P59F Arachis hypogaea HOM05D000017 ORTHO05D000013 1.6e-06 55.8 54 48.1
Ca_19105_v3 Cicer arietinum L. HOM05D010632 ORTHO05D012807 1.6e-06 55.8 58 41.4
Ca_22667_v3 Cicer arietinum L. HOM05D000017 ORTHO05D007253 1.6e-06 55.8 53 49.1
Ca_23084_v3 Cicer arietinum L. HOM05D000017 ORTHO05D000013 1.6e-06 55.8 58 41.4
Ca_06557_v3 Cicer arietinum L. HOM05D000017 ORTHO05D000013 3.6e-06 54.7 55 41.8
CSS0005365 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 8.0e-06 53.5 57 42.1
CSS0014585 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 8.0e-06 53.5 57 42.1
CSS0024815 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 8.0e-06 53.5 57 42.1
CSS0029886 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 8.0e-06 53.5 57 42.1
CSS0030802 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 8.0e-06 53.5 57 42.1
CSS0035395 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 8.0e-06 53.5 57 42.1
CSS0038676 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 8.0e-06 53.5 57 42.1
CSS0046785 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 8.0e-06 53.5 57 42.1
Ca_06856_v3 Cicer arietinum L. HOM05D000017 ORTHO05D000013 8.0e-06 53.5 58 39.7


User provided reference genes

Program Settings