Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.008G252432 Phaseolus vulgaris HOM05D000139 ORTHO05D010351 5.0e-196 687.6 346 100.0
Glyma.17G240200 Glycine max HOM05D000139 ORTHO05D010351 7.5e-99 364.8 348 60.6
Glyma.06G200300 Glycine max HOM05D000139 ORTHO05D010351 8.6e-95 351.3 353 58.1
Phvul.008G252300 Phaseolus vulgaris HOM05D000139 ORTHO05D010351 4.9e-90 335.5 336 55.7
Glyma.02G231900 Glycine max HOM05D000139 ORTHO05D010351 2.4e-81 306.6 399 48.4
Glyma.02G232000 Glycine max HOM05D000139 ORTHO05D010351 1.2e-77 294.3 357 54.9
Phvul.008G252500 Phaseolus vulgaris HOM05D000139 ORTHO05D010351 4.9e-74 282.3 350 51.7
Ca_05658_v3 Cicer arietinum L. HOM05D000139 ORTHO05D010351 3.3e-62 243.0 350 43.7
arahy.Tifrunner.gnm1.ann1.5S97B2 Arachis hypogaea HOM05D000139 ORTHO05D010351 9.5e-62 241.5 345 42.6
Lalb_Chr10g0103531 Lupinus albus HOM05D000139 ORTHO05D010351 1.6e-61 240.7 336 42.9
Glyma.14G199600 Glycine max HOM05D000139 ORTHO05D010351 1.8e-60 237.3 347 43.5
LjContig00141g0005562 Lotus japonicus HOM05D000139 ORTHO05D010351 8.9e-60 235.0 351 44.4
arahy.Tifrunner.gnm1.ann1.GR7VGW Arachis hypogaea HOM05D000139 ORTHO05D010351 1.5e-59 234.2 345 42.3
arahy.Tifrunner.gnm1.ann1.5Y376T Arachis hypogaea HOM05D000139 ORTHO05D010351 5.8e-59 232.3 343 42.3
TPR.G27408 Trifolium pratense HOM05D000139 ORTHO05D010351 5.8e-59 232.3 348 43.7
Glyma.14G199700 Glycine max HOM05D000139 ORTHO05D010351 1.7e-58 230.7 345 44.1
Medtr5g073460 Medicago truncatula HOM05D000139 ORTHO05D000103 2.2e-58 230.3 348 42.5
Medtr5g073620 Medicago truncatula HOM05D000139 ORTHO05D010351 2.2e-58 230.3 349 43.3
TPR.G27407 Trifolium pratense HOM05D000139 ORTHO05D010351 8.4e-58 228.4 348 41.4
Medtr5g074130 Medicago truncatula HOM05D000139 ORTHO05D010351 1.4e-57 227.6 345 41.2
Psat2g054880 Pisum sativum HOM05D000139 ORTHO05D010351 1.2e-56 224.6 345 42.3
arahy.Tifrunner.gnm1.ann1.6DK79V Arachis hypogaea HOM05D000139 ORTHO05D010351 3.0e-55 219.9 347 40.1
arahy.Tifrunner.gnm1.ann1.MWQM2H Arachis hypogaea HOM05D000139 ORTHO05D010351 5.1e-55 219.2 346 41.3
Phvul.008G167600 Phaseolus vulgaris HOM05D000139 ORTHO05D010351 1.9e-54 217.2 203 63.5
Psat2g054200 Pisum sativum HOM05D000139 ORTHO05D010351 9.6e-54 214.9 347 40.3
arahy.Tifrunner.gnm1.ann1.JG7RLL Arachis hypogaea HOM05D000139 ORTHO05D000103 2.8e-53 213.4 337 38.6
arahy.Tifrunner.gnm1.ann1.624Y80 Arachis hypogaea HOM05D000139 ORTHO05D010351 3.6e-53 213.0 346 40.8
Medtr5g073480 Medicago truncatula HOM05D000139 ORTHO05D010351 3.6e-53 213.0 345 39.4
Medtr5g073960 Medicago truncatula HOM05D000139 ORTHO05D010351 4.7e-53 212.6 348 38.5
arahy.Tifrunner.gnm1.ann1.47MQLD Arachis hypogaea HOM05D000139 ORTHO05D000103 6.2e-53 212.2 345 38.3
Phvul.008G257033 Phaseolus vulgaris HOM05D000139 ORTHO05D010351 6.9e-52 208.8 161 65.8
Medtr5g073920 Medicago truncatula HOM05D000139 ORTHO05D010351 1.5e-51 207.6 350 39.7
LjContig00141g0019613 Lotus japonicus HOM05D000139 ORTHO05D010351 9.9e-51 204.9 323 42.4
arahy.Tifrunner.gnm1.ann1.DF7IVU Arachis hypogaea HOM05D000139 ORTHO05D010351 1.7e-50 204.1 345 39.1
arahy.Tifrunner.gnm1.ann1.SDH2U8 Arachis hypogaea HOM05D000139 ORTHO05D010351 2.2e-50 203.8 343 39.4
Medtr5g093530 Medicago truncatula HOM05D000139 ORTHO05D010351 2.2e-50 203.8 193 58.0
Medtr5g073840 Medicago truncatula HOM05D000139 ORTHO05D010351 1.9e-49 200.7 253 49.8
Psat2g054640 Pisum sativum HOM05D000139 ORTHO05D000103 1.9e-49 200.7 352 37.2
Medtr3g464010 Medicago truncatula HOM05D000139 ORTHO05D010351 3.2e-49 199.9 352 40.6
arahy.Tifrunner.gnm1.ann1.T11BLV Arachis hypogaea HOM05D000139 ORTHO05D000103 7.1e-49 198.7 361 36.3
LjContig00141g0001664 Lotus japonicus HOM05D000139 ORTHO05D000103 1.6e-48 197.6 328 40.2
Medtr5g074450 Medicago truncatula HOM05D002545 ORTHO05D002335 4.6e-48 196.1 170 62.4
Phvul.008G257000 Phaseolus vulgaris HOM05D000139 ORTHO05D010351 1.7e-47 194.1 266 44.4
Phvul.008G257100 Phaseolus vulgaris HOM05D000139 ORTHO05D010351 3.9e-47 193.0 248 47.2
Medtr5g073810 Medicago truncatula HOM05D000139 ORTHO05D010351 3.3e-46 189.9 345 37.4
Lalb_Chr05g0220931 Lupinus albus HOM05D000005 ORTHO05D000012 9.6e-46 188.3 193 54.4
Medtr5g074150 Medicago truncatula HOM05D000139 ORTHO05D010351 3.1e-44 183.3 166 56.0
Medtr5g074190 Medicago truncatula HOM05D001165 ORTHO05D010351 1.2e-43 181.4 172 57.6
Phvul.008G256900 Phaseolus vulgaris HOM05D000139 ORTHO05D010351 3.8e-42 176.4 250 42.0
Medtr5g074090 Medicago truncatula HOM05D000139 ORTHO05D010351 2.4e-41 173.7 172 55.2
Psat2g054760 Pisum sativum HOM05D000139 ORTHO05D014784 5.4e-41 172.6 191 50.8
Glyma.14G199800 Glycine max HOM05D000081 ORTHO05D014784 3.9e-39 166.4 191 50.8
Medtr5g073880 Medicago truncatula HOM05D000139 ORTHO05D010351 5.1e-39 166.0 207 47.8
Glyma.06G200400 Glycine max HOM05D000139 ORTHO05D010351 1.9e-38 164.1 208 51.9
Medtr5g073750 Medicago truncatula HOM05D000139 ORTHO05D010351 3.3e-38 163.3 197 47.7
Medtr5g074200 Medicago truncatula HOM05D000081 ORTHO05D014784 5.6e-38 162.5 191 50.8
Phvul.001G122400 Phaseolus vulgaris HOM05D000139 ORTHO05D010351 5.6e-38 162.5 159 52.8
Glyma.06G201100 Glycine max HOM05D000139 ORTHO05D010351 1.3e-37 161.4 211 49.8
Medtr5g073610 Medicago truncatula HOM05D000139 ORTHO05D010351 2.1e-37 160.6 309 38.2
TPR.G24967 Trifolium pratense HOM05D000081 ORTHO05D014784 2.1e-37 160.6 192 47.9
Glyma.06G201000 Glycine max HOM05D000139 ORTHO05D010351 3.7e-37 159.8 208 51.4
Phvul.008G251800 Phaseolus vulgaris HOM05D000081 ORTHO05D014784 1.5e-35 154.5 185 48.6
Phvul.008G251700 Phaseolus vulgaris HOM05D000081 ORTHO05D014784 2.0e-35 154.1 189 47.6
Psat2g054920 Pisum sativum HOM05D000081 ORTHO05D014784 2.0e-35 154.1 173 51.4
Lalb_Chr10g0103581 Lupinus albus HOM05D000139 ORTHO05D010351 9.3e-33 145.2 141 55.3
arahy.Tifrunner.gnm1.ann1.T74DGZ Arachis hypogaea HOM05D000139 ORTHO05D000103 2.7e-32 143.7 344 29.7
TPR.G27412 Trifolium pratense HOM05D000139 ORTHO05D000103 4.6e-32 142.9 278 36.0
arahy.Tifrunner.gnm1.ann1.B7RGGF Arachis hypogaea HOM05D000139 ORTHO05D000103 1.3e-31 141.4 341 29.9
Medtr5g073860 Medicago truncatula HOM05D000139 ORTHO05D010351 1.1e-30 138.3 126 60.3
Medtr5g073470 Medicago truncatula HOM05D000139 ORTHO05D010351 1.9e-30 137.5 169 50.3
arahy.Tifrunner.gnm1.ann1.5L9Z02 Arachis hypogaea HOM05D000139 ORTHO05D026354 2.1e-29 134.0 254 37.8
Lalb_Chr17g0345331 Lupinus albus HOM05D000139 ORTHO05D000103 4.8e-29 132.9 345 29.6
Ca_05667_v3 Cicer arietinum L. HOM05D000139 ORTHO05D022363 1.1e-28 131.7 339 31.6
Ca_30483_v3 Cicer arietinum L. HOM05D000139 ORTHO05D000103 5.3e-28 129.4 244 37.3
Medtr5g074070 Medicago truncatula HOM05D000139 ORTHO05D010351 6.9e-28 129.0 209 42.1
Medtr6g078770 Medicago truncatula HOM05D000139 ORTHO05D019269 2.0e-27 127.5 289 35.3
Medtr6g078610 Medicago truncatula HOM05D000005 ORTHO05D019269 2.2e-26 124.0 157 45.2
arahy.Tifrunner.gnm1.ann1.47NBR1 Arachis hypogaea HOM05D002434 ORTHO05D082345 4.9e-26 122.9 254 36.2
Lj2g0002486 Lotus japonicus HOM05D000005 ORTHO05D000012 2.5e-25 120.6 171 41.5
Lj2g0021893 Lotus japonicus HOM05D000139 ORTHO05D019269 2.5e-25 120.6 171 41.5
Medtr6g075870 Medicago truncatula HOM05D000005 ORTHO05D000012 7.1e-25 119.0 185 40.5
Psat1g119960 Pisum sativum HOM05D000139 ORTHO05D019269 1.2e-24 118.2 142 45.1
arahy.Tifrunner.gnm1.ann1.1D3WUK Arachis hypogaea HOM05D000139 ORTHO05D083086 1.3e-23 114.8 278 35.3
arahy.Tifrunner.gnm1.ann1.YM3EBM Arachis hypogaea HOM05D064904 ORTHO05D085231 5.1e-23 112.8 170 44.1
Ca_05668_v3 Cicer arietinum L. HOM05D000139 ORTHO05D010351 1.1e-22 111.7 245 34.7
Glyma.14G198401 Glycine max HOM05D000139 ORTHO05D213612 1.1e-22 111.7 115 55.7
Lj2g0013383 Lotus japonicus HOM05D000139 ORTHO05D019269 1.9e-22 110.9 149 41.6
Medtr5g073660 Medicago truncatula HOM05D000139 ORTHO05D266772 4.3e-22 109.8 277 34.3
arahy.Tifrunner.gnm1.ann1.615JIB Arachis hypogaea HOM05D064904 ORTHO05D087328 5.7e-22 109.4 162 45.1
arahy.Tifrunner.gnm1.ann1.DNP257 Arachis hypogaea HOM05D000139 ORTHO05D000103 5.7e-22 109.4 341 29.3
arahy.Tifrunner.gnm1.ann1.NCQ3Z1 Arachis hypogaea HOM05D000139 ORTHO05D000103 5.7e-22 109.4 159 40.9
Glyma.01G024500 Glycine max HOM05D000139 ORTHO05D020776 1.6e-21 107.8 174 39.1
Lalb_Chr16g0381761 Lupinus albus HOM05D000139 ORTHO05D020776 2.2e-21 107.5 178 39.9
arahy.Tifrunner.gnm1.ann1.CL8DJC Arachis hypogaea HOM05D000139 ORTHO05D000103 6.3e-21 105.9 110 50.9
Ca_05666_v3 Cicer arietinum L. HOM05D000139 ORTHO05D010351 6.3e-21 105.9 247 34.8
Medtr5g093540 Medicago truncatula HOM05D000139 ORTHO05D014784 2.6e-19 100.5 155 43.9
arahy.Tifrunner.gnm1.ann1.TWH6QD Arachis hypogaea HOM05D000139 ORTHO05D000103 1.0e-18 98.6 356 28.9
Glyma.06G200600 Glycine max HOM05D000139 ORTHO05D010351 1.3e-18 98.2 144 44.4
Glyma.01G024300 Glycine max HOM05D000139 ORTHO05D214621 2.2e-18 97.4 175 37.7
Glyma.02G040802 Glycine max HOM05D000139 ORTHO05D020776 2.2e-18 97.4 174 37.4
Medtr5g073820 Medicago truncatula HOM05D000139 ORTHO05D010351 2.9e-18 97.1 313 30.0
Medtr5g073650 Medicago truncatula HOM05D000139 ORTHO05D000103 3.8e-18 96.7 242 32.6
Medtr5g073770 Medicago truncatula HOM05D000139 ORTHO05D010351 5.0e-18 96.3 346 28.6
Psat2g054960 Pisum sativum HOM05D000139 ORTHO05D022363 1.4e-17 94.7 236 34.3
Phvul.002G148200 Phaseolus vulgaris HOM05D000139 ORTHO05D020776 9.4e-17 92.0 203 34.5
arahy.Tifrunner.gnm1.ann1.PW0779 Arachis hypogaea HOM05D000139 ORTHO05D000103 1.6e-16 91.3 342 27.5
Phvul.002G148400 Phaseolus vulgaris HOM05D000139 ORTHO05D020776 1.8e-15 87.8 134 40.3
Medtr5g073830 Medicago truncatula HOM05D000139 ORTHO05D010351 5.1e-15 86.3 166 41.6
Medtr6g078620 Medicago truncatula HOM05D000139 ORTHO05D019269 6.3e-13 79.3 131 35.9
LjContig00141g0009438 Lotus japonicus HOM05D000081 ORTHO05D014784 1.4e-12 78.2 77 48.1
Medtr5g073500 Medicago truncatula HOM05D000139 ORTHO05D029709 2.4e-12 77.4 73 52.1
arahy.Tifrunner.gnm1.ann1.ZNXS72 Arachis hypogaea HOM05D028262 ORTHO05D085152 4.1e-12 76.6 191 34.6
arahy.Tifrunner.gnm1.ann1.9MX0BI Arachis hypogaea HOM05D028262 ORTHO05D085252 2.0e-11 74.3 197 32.5
Ca_05657_v3 Cicer arietinum L. HOM05D000139 ORTHO05D000103 1.7e-10 71.2 203 30.0
Lalb_Chr16g0381701 Lupinus albus HOM05D000139 ORTHO05D020776 1.7e-10 71.2 114 38.6
Phvul.008G252101 Phaseolus vulgaris HOM05D000139 ORTHO05D307574 6.5e-10 69.3 119 42.0
Psat2g054160 Pisum sativum HOM05D000139 ORTHO05D010351 1.9e-09 67.8 203 28.6
TPR.G27413 Trifolium pratense HOM05D000139 ORTHO05D000103 5.5e-09 66.2 217 27.6
Lalb_Chr04g0251941 Lupinus albus HOM05D000081 ORTHO05D014784 1.6e-08 64.7 51 56.9
Medtr4g023690 Medicago truncatula HOM05D000139 ORTHO05D264522 1.6e-08 64.7 62 53.2
Medtr5g073850 Medicago truncatula HOM05D000081 ORTHO05D014784 7.9e-08 62.4 178 32.6
Medtr6g078630 Medicago truncatula HOM05D000005 ORTHO05D019269 7.9e-08 62.4 77 46.8
arahy.Tifrunner.gnm1.ann1.1A4FY7 Arachis hypogaea HOM05D000139 ORTHO05D000103 2.3e-07 60.8 106 34.9
CsaV3_1G036490 Cucumis sativus L. HOM05D000139 ORTHO05D000103 2.3e-07 60.8 118 34.7
Glyma.14G199300 Glycine max HOM05D000139 ORTHO05D029709 2.3e-07 60.8 54 57.4
LjContig00141g0009256 Lotus japonicus HOM05D000139 ORTHO05D010351 3.9e-07 60.1 203 28.1
MELO3C020519.2 Cucumis melo HOM05D000139 ORTHO05D000103 5.1e-07 59.7 58 50.0
ClCG03G000430 Citrullus lanatus HOM05D000139 ORTHO05D000103 6.7e-07 59.3 68 45.6
Duzib170G1135 Durio zibethinus HOM05D000139 ORTHO05D000103 6.7e-07 59.3 109 33.0
Duzib168G1779 Durio zibethinus HOM05D000139 ORTHO05D000103 8.8e-07 58.9 109 34.9
Psat2g054680 Pisum sativum HOM05D000139 ORTHO05D029709 1.5e-06 58.2 48 56.2
Sed0018712 Sechium edule HOM05D000139 ORTHO05D000103 1.5e-06 58.2 106 35.8
Thecc.09G358100 Theobroma cacao HOM05D000139 ORTHO05D000103 3.3e-06 57.0 109 33.9
TAR633G2387 Trochodendron aralioides HOM05D000139 ORTHO05D000103 4.4e-06 56.6 68 39.7
arahy.Tifrunner.gnm1.ann1.1AIF95 Arachis hypogaea HOM05D000254 ORTHO05D000165 5.7e-06 56.2 246 27.2
Gohir.D03G143200 Gossypium hirsutum HOM05D000139 ORTHO05D000103 5.7e-06 56.2 109 32.1
Manes.02G217200 Manihot esculenta HOM05D000139 ORTHO05D000103 5.7e-06 56.2 59 45.8
Oeu019271.1 Olea europaea HOM05D000139 ORTHO05D000103 7.4e-06 55.8 100 36.0


User provided reference genes

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