Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.008G249200 Phaseolus vulgaris HOM05D008100 ORTHO05D009715 1.5e-19 101.7 49 100.0
VMungo0464G0905 Vigna mungo HOM05D008100 ORTHO05D009715 2.6e-11 74.3 49 71.4
Medtr0051s0090 Medicago truncatula HOM05D008100 ORTHO05D009715 5.7e-11 73.2 48 66.7
Ca_18083_v3 Cicer arietinum L. HOM05D000162 ORTHO05D000090 9.7e-11 72.4 44 75.0
Psat2g130520 Pisum sativum HOM05D008100 ORTHO05D009715 1.1e-09 68.9 48 66.7
Medtr7g095300 Medicago truncatula HOM05D000162 ORTHO05D000090 1.8e-09 68.2 47 61.7
Medtr6g079960 Medicago truncatula HOM05D008100 ORTHO05D009715 2.4e-09 67.8 44 65.9
Medtr4g107180 Medicago truncatula HOM05D010072 ORTHO05D000090 3.1e-09 67.4 47 66.0
Medtr0654s0010 Medicago truncatula HOM05D008100 ORTHO05D009715 3.5e-08 63.9 47 61.7
Medtr6g081920 Medicago truncatula HOM05D008100 ORTHO05D000090 4.5e-08 63.5 42 64.3
Glyma.09G176800 Glycine max HOM05D008100 ORTHO05D009715 5.9e-08 63.2 44 65.9
Ca_01147_v3 Cicer arietinum L. HOM05D008100 ORTHO05D012481 1.0e-07 62.4 38 76.3
VMungo1215G2801 Vigna mungo HOM05D008100 ORTHO05D010195 1.3e-07 62.0 47 63.8
Ca_07240_v3 Cicer arietinum L. HOM05D000162 ORTHO05D000090 1.7e-07 61.6 50 62.0
A09p62690 Brassica napus HOM05D000162 ORTHO05D000090 6.5e-07 59.7 46 54.3
Phvul.004G149900 Phaseolus vulgaris HOM05D008100 ORTHO05D009715 6.5e-07 59.7 39 64.1
arahy.Tifrunner.gnm1.ann1.BXHN9I Arachis hypogaea HOM05D000162 ORTHO05D000090 8.5e-07 59.3 47 57.4
arahy.Tifrunner.gnm1.ann1.BX8F04 Arachis hypogaea HOM05D000162 ORTHO05D000090 1.1e-06 58.9 48 52.1
arahy.Tifrunner.gnm1.ann1.Q5C4BX Arachis hypogaea HOM05D008100 ORTHO05D009715 1.5e-06 58.5 48 58.3
arahy.Tifrunner.gnm1.ann1.QV0CY4 Arachis hypogaea HOM05D000162 ORTHO05D000090 2.5e-06 57.8 48 54.2
Lj1g0012010 Lotus japonicus HOM05D000162 ORTHO05D000090 2.5e-06 57.8 44 61.4
arahy.Tifrunner.gnm1.ann1.P9T7FJ Arachis hypogaea HOM05D000239 ORTHO05D000090 4.2e-06 57.0 45 57.8
arahy.Tifrunner.gnm1.ann1.H82N3I Arachis hypogaea HOM05D000162 ORTHO05D000090 5.5e-06 56.6 48 52.1
Lalb_Chr05g0220111 Lupinus albus HOM05D000162 ORTHO05D000090 5.5e-06 56.6 44 61.4
Manes.09G016633 Manihot esculenta HOM05D000162 ORTHO05D000090 5.5e-06 56.6 47 48.9
Medtr6g072030 Medicago truncatula HOM05D027749 ORTHO05D048960 5.5e-06 56.6 45 55.6
TPR.G3582 Trifolium pratense HOM05D000162 ORTHO05D000090 5.5e-06 56.6 44 63.6
arahy.Tifrunner.gnm1.ann1.5GFX18 Arachis hypogaea HOM05D000162 ORTHO05D000090 9.4e-06 55.8 45 55.6
arahy.Tifrunner.gnm1.ann1.SFW5WJ Arachis hypogaea HOM05D000162 ORTHO05D000090 9.4e-06 55.8 48 52.1
C08p46920 Brassica napus HOM05D004112 ORTHO05D004739 9.4e-06 55.8 50 54.0
Medtr0237s0070 Medicago truncatula HOM05D000162 ORTHO05D000090 9.4e-06 55.8 37 64.9
Medtr6g046300 Medicago truncatula HOM05D000162 ORTHO05D000090 9.4e-06 55.8 36 69.4
Sp3g20240 Schrenkiella parvula HOM05D000162 ORTHO05D000090 9.4e-06 55.8 40 60.0


User provided reference genes

Program Settings