Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.008G248400 Phaseolus vulgaris HOM05D005957 ORTHO05D007318 3.9e-102 374.8 186 100.0
VMungo0647G0754 Vigna mungo HOM05D005957 ORTHO05D007318 5.4e-88 327.8 187 88.8
Glyma.14G203500 Glycine max HOM05D005957 ORTHO05D007318 2.7e-79 298.9 187 80.7
Glyma.02G235500 Glycine max HOM05D005957 ORTHO05D007318 3.5e-79 298.5 187 81.3
Medtr5g075190 Medicago truncatula HOM05D005957 ORTHO05D007318 5.0e-57 224.9 179 64.8
Psat2g052120 Pisum sativum HOM05D005957 ORTHO05D007318 3.2e-56 222.2 179 65.9
TPR.G25771 Trifolium pratense HOM05D005957 ORTHO05D007318 1.6e-55 219.9 179 67.0
LjContig00141g0008224 Lotus japonicus HOM05D005957 ORTHO05D007318 6.1e-55 218.0 178 66.3
Sabra19G0126000 Salix brachista HOM05D005957 ORTHO05D007318 2.2e-49 199.5 178 61.2
Manes.18G139500 Manihot esculenta HOM05D005957 ORTHO05D007318 1.9e-48 196.4 189 58.2
Potri.019G128400 Populus trichocarpa HOM05D005957 ORTHO05D007318 7.2e-48 194.5 175 61.7
Duzib168G0649 Durio zibethinus HOM05D005957 ORTHO05D007318 6.7e-46 188.0 180 58.9
Lalb_Chr17g0345591 Lupinus albus HOM05D005957 ORTHO05D007318 2.0e-45 186.4 182 57.7
Potri.013G155300 Populus trichocarpa HOM05D005957 ORTHO05D007318 7.4e-45 184.5 178 58.4
Ca_05700_v3 Cicer arietinum L. HOM05D005957 ORTHO05D007318 6.3e-44 181.4 126 72.2
Ca_30026_v3 Cicer arietinum L. HOM05D005957 ORTHO05D007318 6.3e-44 181.4 126 72.2
GSVIVG01024580001 Vitis vinifera HOM05D005957 ORTHO05D007318 6.3e-44 181.4 185 54.6
RcHm_v2.0_Chr5g0072641 Rosa chinensis HOM05D005957 ORTHO05D007318 1.8e-43 179.9 178 57.3
FvH4_3g40300 Fragaria vesca HOM05D005957 ORTHO05D007318 1.2e-42 177.2 176 55.7
CANSAT54G0691 Cannabis sativa HOM05D005957 ORTHO05D007318 1.6e-42 176.8 190 54.2
Haze_24453 Corylus avellana HOM05D005957 ORTHO05D007318 2.6e-42 176.0 185 55.7
Nitab4.5_0007927g0010 Nicotiana tabacum HOM05D005957 ORTHO05D007318 2.6e-42 176.0 177 57.1
Cfa011817 Carpinus fangiana HOM05D005957 ORTHO05D007318 4.5e-42 175.3 186 54.3
FAN21G1009 Fragaria x ananassa HOM05D005957 ORTHO05D007318 7.7e-42 174.5 176 55.1
Hma1.2p1_0119F.1_g056870 Hydrangea macrophylla HOM05D005957 ORTHO05D007318 1.0e-41 174.1 187 56.1
QL01p025125 Quercus lobata HOM05D005957 ORTHO05D007318 2.2e-41 172.9 185 54.1
Atru.chr1.2524 Acer truncatum HOM05D005957 ORTHO05D007318 6.5e-41 171.4 187 52.9
MD11G1055300 Malus domestica HOM05D005957 ORTHO05D007318 8.5e-41 171.0 185 53.5
CiPaw.14G051700 Carya illinoinensis HOM05D005957 ORTHO05D007318 1.5e-40 170.2 177 53.7
COL.COLO4_11196 Corchorus olitorius HOM05D005957 ORTHO05D007318 2.5e-40 169.5 190 54.7
CiPaw.13G065100 Carya illinoinensis HOM05D005957 ORTHO05D007318 4.2e-40 168.7 177 55.9
Nitab4.5_0000002g0080 Nicotiana tabacum HOM05D005957 ORTHO05D007318 5.5e-40 168.3 179 55.3
Oeu064677.1 Olea europaea HOM05D005957 ORTHO05D007318 1.6e-39 166.8 172 52.9
Prupe.6G042800 Prunus persica HOM05D005957 ORTHO05D007318 1.4e-38 163.7 183 54.6
FAN16G3236 Fragaria x ananassa HOM05D005957 ORTHO05D007318 1.8e-38 163.3 161 55.9
Ciclev10003853m.g Citrus clementina HOM05D005957 ORTHO05D007318 2.3e-38 162.9 201 48.8
FAN11G2330 Fragaria x ananassa HOM05D005957 ORTHO05D007318 2.3e-38 162.9 161 55.9
Cc01_g15210 Coffea canephora HOM05D005957 ORTHO05D007318 3.0e-38 162.5 176 52.8
Peaxi162Scf01692g00003 Petunia axillaris HOM05D005957 ORTHO05D007318 5.2e-38 161.8 182 53.8
MD03G1053700 Malus domestica HOM05D005957 ORTHO05D007318 2.6e-37 159.5 187 51.9
FAN25G1085 Fragaria x ananassa HOM05D005957 ORTHO05D007318 3.3e-37 159.1 163 54.0
PGSC0003DMG400046061 Solanum tuberosum HOM05D005957 ORTHO05D007318 4.4e-37 158.7 179 52.5
Gohir.A05G129400 Gossypium hirsutum HOM05D005957 ORTHO05D007318 7.5e-37 157.9 195 52.3
Aqoxy2G00718 Aquilegia oxysepala HOM05D005957 ORTHO05D007318 2.8e-36 156.0 178 52.8
Gorai.009G137600 Gossypium raimondii HOM05D005957 ORTHO05D007318 2.8e-36 156.0 195 51.8
MELO3C026874.2 Cucumis melo HOM05D005957 ORTHO05D007318 3.7e-36 155.6 171 53.8
Solyc01g090870.1 Solanum lycopersicum HOM05D005957 ORTHO05D007318 2.4e-35 152.9 179 50.8
Sopen01g036610 Solanum pennellii HOM05D005957 ORTHO05D007318 3.1e-35 152.5 179 50.8
Peaxi162Scf00390g00049 Petunia axillaris HOM05D005957 ORTHO05D007318 7.0e-35 151.4 180 48.9
SGA_v2.0_scaffold77G25368 Striga asiatica HOM05D005957 ORTHO05D007318 4.5e-34 148.7 181 47.5
Solyc06g082450.1 Solanum lycopersicum HOM05D005957 ORTHO05D007318 7.7e-34 147.9 168 53.6
CsaV3_6G019090 Cucumis sativus L. HOM05D005957 ORTHO05D007318 2.9e-33 146.0 167 51.5
TWI79G1455 Tripterygium wilfordii HOM05D005957 ORTHO05D007318 5.0e-33 145.2 116 66.4
MBI03_g02190_MAGBIO Magnolia biondii HOM05D005957 ORTHO05D007318 8.5e-33 144.4 180 46.1
Cpa.g.sc2.317 Carica papaya HOM05D005957 ORTHO05D007318 1.5e-32 143.7 104 69.2
Nitab4.5_0002091g0020 Nicotiana tabacum HOM05D005957 ORTHO05D007318 1.9e-32 143.3 178 49.4
Sed0019639 Sechium edule HOM05D005957 ORTHO05D007318 2.5e-32 142.9 170 48.8
THA.LOC104800785 Tarenaya hassleriana HOM05D005957 ORTHO05D007318 2.5e-32 142.9 188 48.9
Phvul.006G076900 Phaseolus vulgaris HOM05D005957 ORTHO05D007318 9.4e-32 141.0 142 55.6
Sabra13G0125100 Salix brachista HOM05D005957 ORTHO05D007318 1.8e-30 136.7 106 64.2
Thecc.09G362300 Theobroma cacao HOM05D005957 ORTHO05D007318 1.8e-30 136.7 112 63.4
ClCG02G019100 Citrullus lanatus HOM05D005957 ORTHO05D007318 2.3e-30 136.3 169 48.5
TAR623G0423 Trochodendron aralioides HOM05D005957 ORTHO05D007318 4.0e-30 135.6 104 65.4
Nitab4.5_0002759g0020 Nicotiana tabacum HOM05D005957 ORTHO05D007318 5.2e-30 135.2 176 48.9
Ah.08g217120 Amaranthus hybridus HOM05D005957 ORTHO05D007318 1.2e-29 134.0 175 48.0
Migut.D00827 Erythranthe guttata HOM05D005957 ORTHO05D007318 1.2e-29 134.0 186 45.7
Carub.0004s1155 Capsella rubella HOM05D005957 ORTHO05D007318 1.5e-29 133.7 187 44.9
Sp4g12950 Schrenkiella parvula HOM05D005957 ORTHO05D007318 5.7e-29 131.7 189 45.5
EL10Ac7g16454 Beta vulgaris HOM05D005957 ORTHO05D007318 9.8e-29 131.0 114 57.0
AL4G25260 Arabidopsis lyrata HOM05D005957 ORTHO05D007318 1.7e-28 130.2 191 44.5
Thhalv10017867m.g Eutrema salsugineum HOM05D005957 ORTHO05D007318 1.7e-28 130.2 193 44.6
CARHR123750 Cardamine hirsuta HOM05D005957 ORTHO05D007318 2.2e-28 129.8 200 45.5
Nn5g26879 Nelumbo nucifera HOM05D005957 ORTHO05D007318 2.2e-28 129.8 113 59.3
Dinv04837 Davidia involucrata HOM05D005957 ORTHO05D007318 3.7e-28 129.0 101 63.4
AT2G30395 Arabidopsis thaliana HOM05D005957 ORTHO05D007318 6.3e-28 128.3 188 44.1
Rhsim13G0060900 Rhododendron simsii HOM05D005957 ORTHO05D007318 6.3e-28 128.3 107 60.7
Migut.N00743 Erythranthe guttata HOM05D005957 ORTHO05D007318 1.4e-27 127.1 191 42.9
Eucgr.J01842 Eucalyptus grandis HOM05D005957 ORTHO05D007318 1.4e-27 127.1 120 55.8
BcaB02g10322 Brassica carinata HOM05D005957 ORTHO05D007318 4.1e-27 125.6 192 44.8
CSS0038993 Camellia sinensis var. sinensis HOM05D005957 ORTHO05D007318 4.1e-27 125.6 106 62.3
Gohir.D05G134050 Gossypium hirsutum HOM05D005957 ORTHO05D007318 7.0e-27 124.8 123 59.3
BcaC02g11133 Brassica carinata HOM05D005957 ORTHO05D007318 9.1e-27 124.4 193 43.5
A05p15090 Brassica napus HOM05D005957 ORTHO05D007318 9.1e-27 124.4 193 43.0
Sopen06g033830 Solanum pennellii HOM05D005957 ORTHO05D007318 9.1e-27 124.4 98 66.3
Aa31LG5G6330 Aethionema arabicum HOM05D005957 ORTHO05D007318 1.2e-26 124.0 198 39.9
Thhalv10017852m.g Eutrema salsugineum HOM05D005957 ORTHO05D007318 1.6e-26 123.6 193 44.0
BolC4t23551H Brassica oleracea HOM05D005957 ORTHO05D007318 2.0e-26 123.2 193 43.0
BraA05t20430Z Brassica rapa HOM05D005957 ORTHO05D007318 2.0e-26 123.2 192 44.3
CAN.G1872.4 Capsicum annuum HOM05D005957 ORTHO05D007318 2.0e-26 123.2 114 57.9
C04p20120 Brassica napus HOM05D005957 ORTHO05D007318 3.5e-26 122.5 194 42.8
BcaB06g28364 Brassica carinata HOM05D005957 ORTHO05D007318 4.5e-26 122.1 199 42.2
A04p23170 Brassica napus HOM05D005957 ORTHO05D007318 5.9e-26 121.7 198 43.9
ECA236G1285 Erigeron canadensis HOM05D005957 ORTHO05D007318 5.9e-26 121.7 115 57.4
HanXRQChr01g0028631 Helianthus annuus HOM05D005957 ORTHO05D007318 1.3e-25 120.6 163 50.9
Oeu011373.1 Olea europaea HOM05D005957 ORTHO05D007318 1.3e-25 120.6 109 56.0
vmacro02888 Vaccinium macrocarpon HOM05D005957 ORTHO05D007318 2.9e-25 119.4 104 56.7
PGR119G2032 Punica granatum HOM05D005957 ORTHO05D007318 3.8e-25 119.0 189 41.8
ATR0681G143 Amborella trichopoda HOM05D005957 ORTHO05D007318 6.6e-25 118.2 174 43.7
PSO170G5428 Papaver somniferum HOM05D005957 ORTHO05D007318 6.6e-25 118.2 111 56.8
MSTRG.17909 Avicennia marina HOM05D005957 ORTHO05D007318 8.6e-25 117.9 106 58.5
DCAR_023195 Daucus carota HOM05D005957 ORTHO05D007318 8.6e-25 117.9 62 82.3
PSO017G7297 Papaver somniferum HOM05D005957 ORTHO05D007318 1.1e-24 117.5 111 56.8
BraA04t17844Z Brassica rapa HOM05D005957 ORTHO05D007318 1.5e-24 117.1 202 42.1
Ah.15g095100 Amaranthus hybridus HOM05D005957 ORTHO05D007318 4.2e-24 115.5 214 38.8
BcaC02g08022 Brassica carinata HOM05D005957 ORTHO05D007318 9.5e-24 114.4 199 42.7
C04p59320 Brassica napus HOM05D005957 ORTHO05D007318 9.5e-24 114.4 199 42.7
HanXRQChr17g0565391 Helianthus annuus HOM05D005957 ORTHO05D007318 1.6e-23 113.6 169 44.4
BolC4t27440H Brassica oleracea HOM05D005957 ORTHO05D007318 2.1e-23 113.2 202 42.1
Dinv28722 Davidia involucrata HOM05D005957 ORTHO05D007318 2.8e-23 112.8 91 63.7
Lsat_1_v5_gn_0_40840 Lactuca sativa HOM05D005957 ORTHO05D007318 2.8e-23 112.8 85 65.9
Carub.0001s0622 Capsella rubella HOM05D005957 ORTHO05D007318 1.0e-22 110.9 178 40.4
AT1G06923 Arabidopsis thaliana HOM05D005957 ORTHO05D007318 1.4e-22 110.5 182 39.0
AL1G16950 Arabidopsis lyrata HOM05D005957 ORTHO05D007318 2.3e-22 109.8 182 39.6
SalBow6G3501 Salvia bowleyana HOM05D005957 ORTHO05D007318 2.6e-21 106.3 84 64.3
CARHR006600 Cardamine hirsuta HOM05D005957 ORTHO05D007318 2.2e-20 103.2 179 37.4
Thhalv10009633m.g Eutrema salsugineum HOM05D005957 ORTHO05D007318 3.7e-20 102.4 179 36.3
Sp1g05630 Schrenkiella parvula HOM05D005957 ORTHO05D007318 6.3e-20 101.7 169 39.1
Dinv12270 Davidia involucrata HOM05D005957 ORTHO05D007318 1.1e-19 100.9 82 62.2
Os05g0328300 Oryza sativa ssp. japonica HOM05D005957 ORTHO05D007318 7.0e-19 98.2 75 58.7
Sc21g0004870 Simmondsia chinensis HOM05D005957 ORTHO05D007318 1.2e-18 97.4 93 50.5
Os07g0679100 Oryza sativa ssp. japonica HOM05D005957 ORTHO05D007318 1.6e-18 97.1 111 47.7
AUR62007156 Chenopodium quinoa HOM05D003140 ORTHO05D003851 5.0e-17 92.0 107 46.7
Zm00001eb350230 Zea mays HOM05D005957 ORTHO05D007318 5.0e-17 92.0 200 36.5
A09p66670 Brassica napus HOM05D005957 ORTHO05D007318 8.6e-17 91.3 176 34.1
BraA09t42007Z Brassica rapa HOM05D005957 ORTHO05D007318 1.1e-16 90.9 176 33.5
Zm00001eb330630 Zea mays HOM05D005957 ORTHO05D007318 5.6e-16 88.6 62 62.9
BcaC07g42550 Brassica carinata HOM05D005957 ORTHO05D007318 9.5e-16 87.8 66 57.6
BcaC07g42036 Brassica carinata HOM05D005957 ORTHO05D007318 1.4e-14 84.0 89 44.9
BcaC07g42037 Brassica carinata HOM05D005957 ORTHO05D007318 1.4e-14 84.0 89 44.9
C08p50900 Brassica napus HOM05D005957 ORTHO05D007318 2.3e-14 83.2 161 32.9
BolC8t52618H Brassica oleracea HOM05D005957 ORTHO05D007318 2.3e-14 83.2 161 32.9
SEGI_34718 Sequoiadendron giganteum HOM05D005957 ORTHO05D007318 1.0e-09 67.8 70 45.7
CARHR123780 Cardamine hirsuta HOM05D005957 ORTHO05D007318 4.7e-07 58.9 160 39.4


User provided reference genes

Program Settings