Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.008G247700 Phaseolus vulgaris HOM05D008084 ORTHO05D010227 3.0e-170 601.7 290 100.0
VMungo0647G2268 Vigna mungo HOM05D008084 ORTHO05D010227 9.6e-140 500.4 291 85.9
Glyma.14G204200 Glycine max HOM05D008084 ORTHO05D010227 5.6e-116 421.4 292 74.0
Glyma.02G236300 Glycine max HOM05D008084 ORTHO05D010227 1.1e-111 407.1 293 73.7
Medtr5g075400 Medicago truncatula HOM05D008084 ORTHO05D010227 5.0e-88 328.6 318 56.3
Psat2g050960 Pisum sativum HOM05D008084 ORTHO05D010227 5.2e-85 318.5 314 55.7
Ca_05708_v3 Cicer arietinum L. HOM05D008084 ORTHO05D010227 3.1e-82 309.3 309 56.6
TPR.G18293 Trifolium pratense HOM05D008084 ORTHO05D010227 2.6e-76 289.7 335 51.9
VMungo0540G0456 Vigna mungo HOM05D008084 ORTHO05D010227 4.4e-76 288.9 310 56.8
Phvul.006G078700 Phaseolus vulgaris HOM05D008084 ORTHO05D010227 7.5e-76 288.1 317 55.5
LjContig00141g0012818 Lotus japonicus HOM05D008084 ORTHO05D010227 1.1e-74 284.3 290 55.9
Ca_15056_v3 Cicer arietinum L. HOM05D008084 ORTHO05D010227 8.5e-72 274.6 291 53.6
Lj6g0015607 Lotus japonicus HOM05D008084 ORTHO05D010227 1.5e-68 263.8 304 54.3
arahy.Tifrunner.gnm1.ann1.QQ3HDC Arachis hypogaea HOM05D008084 ORTHO05D010227 3.4e-68 262.7 318 50.0
Glyma.18G052300 Glycine max HOM05D008084 ORTHO05D010227 9.8e-68 261.2 315 51.7
arahy.Tifrunner.gnm1.ann1.VW3DCY Arachis hypogaea HOM05D008084 ORTHO05D010227 1.9e-63 246.9 315 49.2
Oeu015570.1 Olea europaea HOM05D008084 ORTHO05D010227 1.1e-58 231.1 332 48.2
FAN11G0725 Fragaria x ananassa HOM05D008084 ORTHO05D010227 2.0e-57 226.9 337 45.7
Potri.019G130200 Populus trichocarpa HOM05D008084 ORTHO05D010227 7.8e-57 224.9 318 46.9
Gorai.003G152600 Gossypium raimondii HOM05D008084 ORTHO05D010227 1.3e-56 224.2 265 52.1
TWI31G0108 Tripterygium wilfordii HOM05D008084 ORTHO05D010227 2.3e-56 223.4 299 49.2
Manes.02G211900 Manihot esculenta HOM05D008084 ORTHO05D010227 2.9e-56 223.0 314 48.7
Potri.013G157100 Populus trichocarpa HOM05D008084 ORTHO05D010227 5.0e-56 222.2 323 47.1
Medtr3g467150 Medicago truncatula HOM05D008084 ORTHO05D010227 1.1e-55 221.1 301 47.5
FvH4_3g40511 Fragaria vesca HOM05D008084 ORTHO05D010227 1.5e-55 220.7 337 44.8
Gohir.D03G145500 Gossypium hirsutum HOM05D008084 ORTHO05D010227 1.9e-55 220.3 305 48.2
TAR636G1366 Trochodendron aralioides HOM05D008084 ORTHO05D010227 1.9e-55 220.3 299 49.2
Gohir.A03G023200 Gossypium hirsutum HOM05D008084 ORTHO05D010227 2.5e-55 219.9 305 47.2
Psat5g148440 Pisum sativum HOM05D008084 ORTHO05D010227 5.6e-55 218.8 265 48.7
TWI79G0851 Tripterygium wilfordii HOM05D008084 ORTHO05D010227 1.2e-54 217.6 293 49.1
SalBow2G0186 Salvia bowleyana HOM05D008084 ORTHO05D010227 2.1e-54 216.9 306 47.4
FAN25G2941 Fragaria x ananassa HOM05D008084 ORTHO05D010227 2.8e-54 216.5 336 44.6
FAN16G3304 Fragaria x ananassa HOM05D008084 ORTHO05D010227 6.1e-54 215.3 336 44.6
Cc01_g15320 Coffea canephora HOM05D008084 ORTHO05D010227 2.3e-53 213.4 337 44.8
ECA247G2653 Erigeron canadensis HOM05D008084 ORTHO05D010227 2.3e-53 213.4 347 42.4
MD11G1053800 Malus domestica HOM05D008084 ORTHO05D010227 3.0e-53 213.0 370 43.5
CANSAT54G2569 Cannabis sativa HOM05D008084 ORTHO05D010227 1.5e-52 210.7 346 42.2
Prupe.6G041100 Prunus persica HOM05D008084 ORTHO05D010227 1.5e-52 210.7 346 44.2
Thecc.09G363800 Theobroma cacao HOM05D008084 ORTHO05D010227 3.4e-52 209.5 323 44.6
Aqoxy4G02419 Aquilegia oxysepala HOM05D008084 ORTHO05D010227 4.4e-52 209.1 305 47.5
Dinv12280 Davidia involucrata HOM05D008084 ORTHO05D010227 4.4e-52 209.1 294 47.3
MD03G1051700 Malus domestica HOM05D008084 ORTHO05D010227 9.8e-52 208.0 348 43.7
MELO3C020485.2 Cucumis melo HOM05D008084 ORTHO05D010227 1.3e-51 207.6 308 44.8
HanXRQChr16g0522641 Helianthus annuus HOM05D008084 ORTHO05D010227 1.3e-51 207.6 343 40.2
Sed0017021 Sechium edule HOM05D008084 ORTHO05D010227 1.7e-51 207.2 311 44.4
CsaV3_1G004770 Cucumis sativus L. HOM05D008084 ORTHO05D010227 1.8e-50 203.8 308 45.1
TWI75G0204 Tripterygium wilfordii HOM05D008084 ORTHO05D010227 5.4e-50 202.2 302 47.0
CiPaw.13G063700 Carya illinoinensis HOM05D008084 ORTHO05D010227 1.5e-47 194.1 337 43.9
TPR.G28793 Trifolium pratense HOM05D008084 ORTHO05D010227 4.3e-47 192.6 286 46.9
TAR623G0794 Trochodendron aralioides HOM05D008084 ORTHO05D010227 5.6e-47 192.2 288 45.1
GSVIVG01024560001 Vitis vinifera HOM05D008084 ORTHO05D010227 7.3e-47 191.8 179 58.7
Migut.D00819 Erythranthe guttata HOM05D008084 ORTHO05D010227 1.2e-46 191.0 340 42.1
Eucgr.B04026 Eucalyptus grandis HOM05D008084 ORTHO05D010227 9.8e-44 181.4 159 59.7
Lsat_1_v5_gn_9_13820 Lactuca sativa HOM05D008084 ORTHO05D010227 9.8e-44 181.4 284 41.2
PSO339G0360 Papaver somniferum HOM05D008084 ORTHO05D010227 3.2e-42 176.4 315 41.0
PSO384G0724 Papaver somniferum HOM05D008084 ORTHO05D010227 5.4e-42 175.6 320 40.3
RcHm_v2.0_Chr5g0073191 Rosa chinensis HOM05D008084 ORTHO05D010227 3.9e-40 169.5 236 44.5
PGR102G0866 Punica granatum HOM05D008084 ORTHO05D010227 1.5e-39 167.5 235 46.4
Cpa.g.sc2.297 Carica papaya HOM05D008084 ORTHO05D010227 1.3e-35 154.5 200 47.5
MBI03_g15595_MAGBIO Magnolia biondii HOM05D008084 ORTHO05D010227 7.8e-33 145.2 314 40.4
Zm00001eb419060 Zea mays HOM05D008084 ORTHO05D010227 3.3e-31 139.8 110 63.6
HPP92_028207 Vanilla planifolia HOM05D008084 ORTHO05D010227 1.6e-30 137.5 251 38.2
HPP92_025125 Vanilla planifolia HOM05D008084 ORTHO05D010227 5.2e-29 132.5 226 37.2
Cfa011830 Carpinus fangiana HOM05D008084 ORTHO05D010227 6.0e-25 119.0 312 35.9
SEGI_31879 Sequoiadendron giganteum HOM05D008084 ORTHO05D010227 1.3e-24 117.9 161 43.5
Rhsim13G0059500 Rhododendron simsii HOM05D008084 ORTHO05D010227 2.9e-19 100.1 266 31.2
Actinidia11623 Actinidia chinensis HOM05D008084 ORTHO05D010227 1.2e-17 94.7 193 40.9
Mapoly0102s0044 Marchantia polymorpha HOM05D008084 ORTHO05D010227 9.0e-13 78.6 130 36.2
Actinidia23166 Actinidia chinensis HOM05D008084 ORTHO05D010227 3.5e-09 66.6 168 37.5
Haze_02457 Corylus avellana HOM05D000833 ORTHO05D000969 1.5e-07 61.2 128 33.6
Atru.chr5.2898 Acer truncatum HOM05D000833 ORTHO05D000969 2.5e-07 60.5 76 39.5
Hma1.2p1_0739F.1_g211340 Hydrangea macrophylla HOM05D000833 ORTHO05D000969 7.4e-07 58.9 99 34.3
Potri.009G109400 Populus trichocarpa HOM05D000833 ORTHO05D000969 9.6e-07 58.5 62 43.5
vmacro17891 Vaccinium macrocarpon HOM05D000833 ORTHO05D000969 9.6e-07 58.5 136 30.9
BcaB03g11835 Brassica carinata HOM05D000833 ORTHO05D000969 1.6e-06 57.8 108 33.3
Dinv09077 Davidia involucrata HOM05D000833 ORTHO05D000969 1.6e-06 57.8 109 30.3
Ca_24804_v3 Cicer arietinum L. HOM05D000833 ORTHO05D000969 2.1e-06 57.4 69 40.6
QL11p039299 Quercus lobata HOM05D000833 ORTHO05D000969 2.1e-06 57.4 62 45.2
Hund16563 Selenicereus undatus HOM05D000833 ORTHO05D000969 2.1e-06 57.4 94 34.0
TAR628G0111 Trochodendron aralioides HOM05D000833 ORTHO05D000969 2.1e-06 57.4 62 38.7
Eucgr.I01221 Eucalyptus grandis HOM05D000833 ORTHO05D000969 2.8e-06 57.0 62 46.8
CARHR242380 Cardamine hirsuta HOM05D000833 ORTHO05D000969 3.7e-06 56.6 106 35.8
ClCG09G017730 Citrullus lanatus HOM05D000833 ORTHO05D000969 3.7e-06 56.6 126 33.3
CsaV3_2G014330 Cucumis sativus L. HOM05D000833 ORTHO05D000969 3.7e-06 56.6 128 32.8
Duzib052G0922 Durio zibethinus HOM05D000833 ORTHO05D000969 4.8e-06 56.2 71 38.0
Eucgr.I01220 Eucalyptus grandis HOM05D000833 ORTHO05D000969 4.8e-06 56.2 62 45.2
Eucgr.L01748 Eucalyptus grandis HOM05D000833 ORTHO05D000969 4.8e-06 56.2 62 45.2
QL11p039287 Quercus lobata HOM05D000833 ORTHO05D000969 4.8e-06 56.2 78 35.9
AL4G13450 Arabidopsis lyrata HOM05D000833 ORTHO05D000969 6.2e-06 55.8 69 40.6
CARHR293100 Cardamine hirsuta HOM05D000833 ORTHO05D000969 6.2e-06 55.8 69 40.6
ClCG01G016530 Citrullus lanatus HOM05D000833 ORTHO05D000969 6.2e-06 55.8 80 32.5
Aa31LG7G13520 Aethionema arabicum HOM05D000833 ORTHO05D000969 8.1e-06 55.5 69 40.6
arahy.Tifrunner.gnm1.ann1.04P64Q Arachis hypogaea HOM05D000833 ORTHO05D000969 8.1e-06 55.5 62 40.3
Thhalv10000039m.g Eutrema salsugineum HOM05D000833 ORTHO05D000969 8.1e-06 55.5 62 41.9
Thhalv10024380m.g Eutrema salsugineum HOM05D000833 ORTHO05D000969 8.1e-06 55.5 108 34.3
Gorai.003G019800 Gossypium raimondii HOM05D000833 ORTHO05D000969 8.1e-06 55.5 125 30.4
Lj2g0003861 Lotus japonicus HOM05D000833 ORTHO05D000969 8.1e-06 55.5 58 41.4
Sp4g02460 Schrenkiella parvula HOM05D000833 ORTHO05D000969 8.1e-06 55.5 69 40.6
Sed0005996 Sechium edule HOM05D000833 ORTHO05D000969 8.1e-06 55.5 83 33.7
TWI75G1195 Tripterygium wilfordii HOM05D000833 ORTHO05D000969 8.1e-06 55.5 69 40.6


User provided reference genes

Program Settings