Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.008G237600 Phaseolus vulgaris HOM05D008015 ORTHO05D009180 2.9e-81 305.4 186 100.0
VMungo0647G1978 Vigna mungo HOM05D008015 ORTHO05D009180 2.0e-50 203.0 164 70.7
Glyma.14G213100 Glycine max HOM05D008015 ORTHO05D009180 4.8e-36 155.2 135 65.9
LjContig00141g0001505 Lotus japonicus HOM05D008015 ORTHO05D009180 2.0e-29 133.3 156 53.8
Lalb_Chr18g0053531 Lupinus albus HOM05D008015 ORTHO05D009180 1.3e-25 120.6 129 50.4
Lalb_Chr15g0084981 Lupinus albus HOM05D008015 ORTHO05D009180 6.3e-20 101.7 144 45.1
TPR.G30001 Trifolium pratense HOM05D008015 ORTHO05D009180 5.0e-17 92.0 161 41.6
QL02p059324 Quercus lobata HOM05D008015 ORTHO05D009180 1.9e-16 90.1 141 44.7
Medtr5g077940 Medicago truncatula HOM05D008015 ORTHO05D009180 2.5e-16 89.7 104 51.9
TAR371G1005 Trochodendron aralioides HOM05D008015 ORTHO05D009180 3.3e-16 89.4 135 43.7
Lalb_Chr17g0346041 Lupinus albus HOM05D008015 ORTHO05D009180 4.3e-16 89.0 133 44.4
Medtr3g065210 Medicago truncatula HOM05D008015 ORTHO05D009180 1.2e-15 87.4 132 45.5
TWI74G1025 Tripterygium wilfordii HOM05D008015 ORTHO05D009180 4.7e-15 85.5 126 40.5
Cc07_g13270 Coffea canephora HOM05D008015 ORTHO05D009180 8.0e-15 84.7 156 33.3
Potri.004G085100 Populus trichocarpa HOM05D008015 ORTHO05D009180 8.0e-15 84.7 149 38.3
Ciclev10012847m.g Citrus clementina HOM05D008015 ORTHO05D009180 1.8e-14 83.6 131 42.7
TWI77G0273 Tripterygium wilfordii HOM05D008015 ORTHO05D009180 1.8e-14 83.6 125 41.6
Cfa007792 Carpinus fangiana HOM05D008015 ORTHO05D009180 3.1e-14 82.8 153 43.1
Potri.017G131300 Populus trichocarpa HOM05D008015 ORTHO05D009180 5.2e-14 82.0 141 39.0
Oeu032314.1 Olea europaea HOM05D008015 ORTHO05D009180 1.2e-13 80.9 137 34.3
Nn4g24386 Nelumbo nucifera HOM05D008015 ORTHO05D009180 3.4e-13 79.3 137 42.3
Psat2g045760 Pisum sativum HOM05D008015 ORTHO05D009180 7.5e-13 78.2 138 43.5
CANSAT35G1526 Cannabis sativa HOM05D008015 ORTHO05D009180 1.7e-12 77.0 127 45.7
MBI13_g45895_MAGBIO Magnolia biondii HOM05D008015 ORTHO05D009180 2.9e-12 76.3 141 34.8
MSTRG.3702 Avicennia marina HOM05D008015 ORTHO05D009180 8.3e-12 74.7 136 36.8
Duzib268G1603 Durio zibethinus HOM05D008015 ORTHO05D009180 1.1e-11 74.3 135 44.4
Glyma.18G041300 Glycine max HOM05D008015 ORTHO05D009180 1.1e-11 74.3 106 47.2
Sabra17G0109400 Salix brachista HOM05D008015 ORTHO05D009180 2.4e-11 73.2 168 36.9
Cpa.g.sc340.4 Carica papaya HOM05D008015 ORTHO05D009180 4.1e-11 72.4 139 40.3
FvH4_1g30203 Fragaria vesca HOM05D008015 ORTHO05D009180 2.0e-10 70.1 141 35.5
FAN19G3187 Fragaria x ananassa HOM05D008015 ORTHO05D009180 4.6e-10 68.9 139 35.3
Manes.02G078100 Manihot esculenta HOM05D008015 ORTHO05D009180 4.6e-10 68.9 158 37.3
Sed0025761 Sechium edule HOM05D008015 ORTHO05D009180 4.6e-10 68.9 127 38.6
TAR629G2519 Trochodendron aralioides HOM05D008015 ORTHO05D009180 4.6e-10 68.9 135 40.0
Thecc.04G053900 Theobroma cacao HOM05D008015 ORTHO05D009180 7.8e-10 68.2 147 38.1
Actinidia28799 Actinidia chinensis HOM05D008015 ORTHO05D009180 1.0e-09 67.8 122 36.1
FAN23G1273 Fragaria x ananassa HOM05D008015 ORTHO05D009180 1.0e-09 67.8 139 35.3
Phvul.001G229400 Phaseolus vulgaris HOM05D008015 ORTHO05D009180 1.0e-09 67.8 100 44.0
SalBow5G5173 Salvia bowleyana HOM05D008015 ORTHO05D009180 1.7e-09 67.0 129 32.6
CSS0009801 Camellia sinensis var. sinensis HOM05D008015 ORTHO05D009180 3.0e-09 66.2 146 34.2
CSS0018355 Camellia sinensis var. sinensis HOM05D008015 ORTHO05D009180 3.0e-09 66.2 146 34.2
RcHm_v2.0_Chr3g0491241 Rosa chinensis HOM05D008015 ORTHO05D009180 3.9e-09 65.9 87 44.8
FAN26G1918 Fragaria x ananassa HOM05D008015 ORTHO05D009180 5.0e-09 65.5 139 33.8
MBI13_g14024_MAGBIO Magnolia biondii HOM05D008015 ORTHO05D009180 6.6e-09 65.1 141 32.6
MBI19_g08383_MAGBIO Magnolia biondii HOM05D008015 ORTHO05D009180 1.9e-08 63.5 131 36.6
DCAR_014163 Daucus carota HOM05D008015 ORTHO05D009180 1.2e-07 60.8 127 37.0
Actinidia35723 Actinidia chinensis HOM05D008015 ORTHO05D009180 1.6e-07 60.5 121 31.4
Aqoxy1G02179 Aquilegia oxysepala HOM05D008015 ORTHO05D009180 2.1e-07 60.1 160 31.9
MD09G1270500 Malus domestica HOM05D008015 ORTHO05D009180 2.1e-07 60.1 184 32.1
Prupe.3G166400 Prunus persica HOM05D008015 ORTHO05D009180 2.8e-07 59.7 183 31.7
VMungo1383G2632 Vigna mungo HOM05D008015 ORTHO05D009180 3.6e-07 59.3 105 42.9
CDE05G1037 Ceratophyllum demersum HOM05D008015 ORTHO05D009180 4.7e-07 58.9 126 34.1
CiPaw.03G073500 Carya illinoinensis HOM05D008015 ORTHO05D009180 6.2e-07 58.5 142 35.2
Glyma.11G215300 Glycine max HOM05D008015 ORTHO05D009180 1.1e-06 57.8 107 40.2
PSO478G3758 Papaver somniferum HOM05D008015 ORTHO05D009180 1.8e-06 57.0 154 31.8
Gohir.A07G073500 Gossypium hirsutum HOM05D008015 ORTHO05D009180 2.3e-06 56.6 131 39.7
ClCG03G008850 Citrullus lanatus HOM05D008015 ORTHO05D009180 5.2e-06 55.5 126 34.1


User provided reference genes

Program Settings