Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.008G234000 Phaseolus vulgaris HOM05D008294 ORTHO05D010468 5.0e-70 267.7 139 100.0
VMungo0647G1342 Vigna mungo HOM05D008294 ORTHO05D010468 1.8e-56 222.6 139 84.2
Glyma.02G246900 Glycine max HOM05D008294 ORTHO05D010468 6.6e-46 187.6 140 72.1
Glyma.14G069300 Glycine max HOM05D008294 ORTHO05D010468 2.3e-43 179.1 140 72.1
Lj1g0007014 Lotus japonicus HOM05D008294 ORTHO05D010468 2.2e-33 146.0 139 59.0
Medtr5g079600 Medicago truncatula HOM05D008294 ORTHO05D010468 5.6e-29 131.3 127 59.1
Lalb_Chr17g0346181 Lupinus albus HOM05D008294 ORTHO05D010468 4.1e-24 115.2 134 47.0
GSVIVG01030864001 Vitis vinifera HOM05D008294 ORTHO05D010468 7.1e-24 114.4 138 47.8
Lalb_Chr04g0251301 Lupinus albus HOM05D008294 ORTHO05D010468 9.2e-24 114.0 138 49.3
Ciclev10013091m.g Citrus clementina HOM05D008294 ORTHO05D010468 7.8e-23 110.9 136 43.4
Thecc.04G121200 Theobroma cacao HOM05D008294 ORTHO05D010468 3.9e-22 108.6 138 48.6
TPR.G3487 Trifolium pratense HOM05D008294 ORTHO05D010468 1.9e-21 106.3 125 48.8
arahy.Tifrunner.gnm1.ann1.RHD4AQ Arachis hypogaea HOM05D008294 ORTHO05D010468 2.8e-20 102.4 136 47.8
arahy.Tifrunner.gnm1.ann1.HG0CBG Arachis hypogaea HOM05D008294 ORTHO05D010468 3.6e-20 102.1 136 47.1
Gorai.008G058300 Gossypium raimondii HOM05D008294 ORTHO05D010468 1.8e-19 99.8 113 49.6
Gohir.D12G055400 Gossypium hirsutum HOM05D008294 ORTHO05D010468 2.4e-19 99.4 134 45.5
Cc07_g08180 Coffea canephora HOM05D008294 ORTHO05D010468 6.8e-19 97.8 126 42.9
Psat2g041240 Pisum sativum HOM05D008294 ORTHO05D010468 1.2e-18 97.1 125 50.4
Manes.01G115600 Manihot esculenta HOM05D008294 ORTHO05D010468 2.6e-18 95.9 125 44.0
Potri.004G088300 Populus trichocarpa HOM05D008294 ORTHO05D010468 9.9e-18 94.0 138 42.8
Cpa.g.sc604.2 Carica papaya HOM05D008294 ORTHO05D010468 2.9e-17 92.4 104 44.2
ClCG05G010930 Citrullus lanatus HOM05D008294 ORTHO05D010468 4.9e-17 91.7 145 37.9
Potri.017G128700 Populus trichocarpa HOM05D008294 ORTHO05D010468 1.1e-16 90.5 137 40.1
QL11p004113 Quercus lobata HOM05D008294 ORTHO05D010468 1.4e-16 90.1 103 52.4
TAR017G0001 Trochodendron aralioides HOM05D008294 ORTHO05D010468 2.4e-16 89.4 136 40.4
Atru.chr13.2285 Acer truncatum HOM05D008294 ORTHO05D010468 7.1e-16 87.8 117 41.9
Prupe.3G159000 Prunus persica HOM05D008294 ORTHO05D010468 1.6e-15 86.7 92 47.8
Sed0009315 Sechium edule HOM05D008294 ORTHO05D010468 3.5e-15 85.5 121 39.7
MELO3C020292.2 Cucumis melo HOM05D008294 ORTHO05D010468 4.6e-15 85.1 134 40.3
CsaV3_3G021650 Cucumis sativus L. HOM05D008294 ORTHO05D010468 1.3e-14 83.6 151 39.7
Sabra17G0107200 Salix brachista HOM05D008294 ORTHO05D010468 2.3e-14 82.8 137 37.2
HanXRQChr14g0439951 Helianthus annuus HOM05D008294 ORTHO05D010468 1.1e-13 80.5 125 40.0
MSTRG.3520 Avicennia marina HOM05D008294 ORTHO05D010468 5.6e-13 78.2 137 35.8
Eucgr.F02821 Eucalyptus grandis HOM05D008294 ORTHO05D010468 5.6e-13 78.2 91 44.0
Peaxi162Scf00118g00016 Petunia axillaris HOM05D008294 ORTHO05D010468 2.1e-12 76.3 127 37.8
Oeu054753.1 Olea europaea HOM05D008294 ORTHO05D010468 2.8e-12 75.9 107 36.4
SalBow7G4521 Salvia bowleyana HOM05D008294 ORTHO05D010468 2.8e-12 75.9 122 41.0
SGA_v2.0_scaffold329G48860 Striga asiatica HOM05D008294 ORTHO05D010468 3.6e-12 75.5 123 38.2
Nn3g18213 Nelumbo nucifera HOM05D008294 ORTHO05D010468 6.2e-12 74.7 116 36.2
MBI10_g08546_MAGBIO Magnolia biondii HOM05D008294 ORTHO05D010468 8.1e-12 74.3 137 35.8
AUR62023240 Chenopodium quinoa HOM05D008294 ORTHO05D010468 1.8e-11 73.2 149 33.6
DCAR_025875 Daucus carota HOM05D008294 ORTHO05D010468 1.8e-11 73.2 135 35.6
EL10Ac2g04485 Beta vulgaris HOM05D008294 ORTHO05D010468 3.1e-11 72.4 150 38.7
Migut.L00469 Erythranthe guttata HOM05D008294 ORTHO05D010468 5.3e-11 71.6 129 34.1
Lsat_1_v5_gn_2_81341 Lactuca sativa HOM05D008294 ORTHO05D010468 9.0e-11 70.9 125 37.6
Nitab4.5_0004399g0030 Nicotiana tabacum HOM05D008294 ORTHO05D010468 1.5e-10 70.1 108 38.0
Nitab4.5_0002248g0070 Nicotiana tabacum HOM05D008294 ORTHO05D010468 5.8e-10 68.2 107 34.6
ECA238G3741 Erigeron canadensis HOM05D008294 ORTHO05D010468 1.3e-09 67.0 100 38.0
Solyc02g091380.1 Solanum lycopersicum HOM05D008294 ORTHO05D010468 4.9e-09 65.1 106 37.7
PGSC0003DMG400030645 Solanum tuberosum HOM05D008294 ORTHO05D010468 1.9e-08 63.2 103 38.8
Nitab4.5_0002366g0040 Nicotiana tabacum HOM05D008294 ORTHO05D010468 4.2e-08 62.0 103 35.0
Sopen02g036000 Solanum pennellii HOM05D008294 ORTHO05D010468 5.4e-08 61.6 105 37.1
unitig_37.g12377 Utricularia gibba HOM05D006815 ORTHO05D008536 1.7e-06 56.6 66 43.9
Migut.H00270 Erythranthe guttata HOM05D008294 ORTHO05D010468 3.0e-06 55.8 74 37.8
Zm00001eb334540 Zea mays HOM05D008294 ORTHO05D010468 8.7e-06 54.3 86 34.9


User provided reference genes

Program Settings