Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.008G233700 Phaseolus vulgaris HOM05D004237 ORTHO05D005002 1.1e-168 596.7 337 100.0
Glyma.02G247200 Glycine max HOM05D004237 ORTHO05D005002 1.4e-153 546.6 342 91.8
LjContig00141g0018818 Lotus japonicus HOM05D004237 ORTHO05D005002 6.0e-101 371.7 342 68.7
CSS0027261 Camellia sinensis var. sinensis HOM05D004237 ORTHO05D005002 1.0e-100 370.9 396 59.3
Dinv14873 Davidia involucrata HOM05D004237 ORTHO05D005002 1.9e-99 366.7 368 63.0
Gohir.A05G279600 Gossypium hirsutum HOM05D004237 ORTHO05D005002 1.4e-97 360.5 395 59.7
Sopen02g035740 Solanum pennellii HOM05D004237 ORTHO05D005002 1.8e-97 360.1 380 59.2
Gorai.009G294600 Gossypium raimondii HOM05D004237 ORTHO05D005002 2.3e-97 359.8 395 60.5
arahy.Tifrunner.gnm1.ann1.MQJ11K Arachis hypogaea HOM05D004237 ORTHO05D005002 5.2e-97 358.6 369 65.9
EL10Ac2g04487 Beta vulgaris HOM05D004237 ORTHO05D005002 5.2e-97 358.6 393 58.8
Lalb_Chr10g0104521 Lupinus albus HOM05D004237 ORTHO05D005002 6.8e-97 358.2 349 67.3
Actinidia17655 Actinidia chinensis HOM05D004237 ORTHO05D005002 4.4e-96 355.5 347 59.1
Gohir.D05G281200 Gossypium hirsutum HOM05D004237 ORTHO05D005002 9.8e-96 354.4 395 60.3
Hund16204 Selenicereus undatus HOM05D004237 ORTHO05D005002 1.7e-95 353.6 400 54.0
Nitab4.5_0002248g0060 Nicotiana tabacum HOM05D004237 ORTHO05D005002 2.9e-95 352.8 379 61.5
Cfa007846 Carpinus fangiana HOM05D004237 ORTHO05D005002 8.3e-95 351.3 406 57.9
Psat2g041040 Pisum sativum HOM05D004237 ORTHO05D005002 8.3e-95 351.3 359 59.6
Solyc02g091090.4 Solanum lycopersicum HOM05D004237 ORTHO05D005002 1.4e-94 350.5 372 59.4
CiPaw.03G068200 Carya illinoinensis HOM05D004237 ORTHO05D005002 5.4e-94 348.6 387 56.6
arahy.Tifrunner.gnm1.ann1.68W1N1 Arachis hypogaea HOM05D004237 ORTHO05D005002 1.2e-93 347.4 368 64.7
Haze_14220 Corylus avellana HOM05D004237 ORTHO05D005002 2.7e-93 346.3 398 55.8
Duzib106G0201 Durio zibethinus HOM05D004237 ORTHO05D005002 4.6e-93 345.5 395 57.7
FvH4_7g06071 Fragaria vesca HOM05D004237 ORTHO05D005002 6.0e-93 345.1 403 57.6
FAN06G1641 Fragaria x ananassa HOM05D004237 ORTHO05D005002 3.0e-92 342.8 402 58.2
Prupe.3G158400 Prunus persica HOM05D004237 ORTHO05D005002 6.6e-92 341.7 403 56.8
CAN.G625.84 Capsicum annuum HOM05D004237 ORTHO05D005002 1.1e-91 340.9 341 58.1
Glyma.14G069000 Glycine max HOM05D004237 ORTHO05D005002 1.5e-91 340.5 274 79.2
Cc07_g08200 Coffea canephora HOM05D004237 ORTHO05D005002 5.6e-91 338.6 398 52.8
TAR633G2403 Trochodendron aralioides HOM05D004237 ORTHO05D005002 9.5e-91 337.8 391 55.5
Sabra04G0058600 Salix brachista HOM05D004237 ORTHO05D005002 2.1e-90 336.7 411 51.6
Oeu047420.1 Olea europaea HOM05D004237 ORTHO05D005002 4.7e-90 335.5 343 56.3
Manes.03G011500 Manihot esculenta HOM05D004237 ORTHO05D005002 8.1e-90 334.7 395 56.2
Atru.chr4.1671 Acer truncatum HOM05D004237 ORTHO05D005002 1.8e-89 333.6 389 55.8
MD09G1261100 Malus domestica HOM05D004237 ORTHO05D005002 3.1e-89 332.8 407 57.0
GSVIVG01030867001 Vitis vinifera HOM05D004237 ORTHO05D005002 3.1e-89 332.8 345 60.3
TPR.G3499 Trifolium pratense HOM05D004237 ORTHO05D005002 5.2e-89 332.0 349 62.8
SalBow3G4435 Salvia bowleyana HOM05D004237 ORTHO05D005002 7.6e-88 328.2 395 55.4
Sc11g0008610 Simmondsia chinensis HOM05D004237 ORTHO05D005002 7.6e-88 328.2 372 53.2
RcHm_v2.0_Chr7g0221661 Rosa chinensis HOM05D004237 ORTHO05D005002 2.9e-87 326.2 399 55.1
Potri.004G088000 Populus trichocarpa HOM05D004237 ORTHO05D005002 3.7e-87 325.9 399 52.4
HanXRQChr09g0262291 Helianthus annuus HOM05D004237 ORTHO05D005002 6.4e-87 325.1 375 55.2
Ca_05866_v3 Cicer arietinum L. HOM05D004237 ORTHO05D005002 1.4e-86 323.9 370 59.5
Ca_29976_v3 Cicer arietinum L. HOM05D004237 ORTHO05D005002 1.4e-86 323.9 370 59.5
ECA232G1788 Erigeron canadensis HOM05D004237 ORTHO05D005002 4.1e-86 322.4 351 53.8
DCAR_025876 Daucus carota HOM05D004237 ORTHO05D005002 1.2e-85 320.9 379 56.2
Thecc.10G175300 Theobroma cacao HOM05D004237 ORTHO05D005002 2.3e-84 316.6 395 55.9
AUR62023243 Chenopodium quinoa HOM05D004237 ORTHO05D005002 1.1e-83 314.3 390 50.0
Rhsim08G0085800 Rhododendron simsii HOM05D004237 ORTHO05D005002 3.3e-83 312.8 374 56.7
Medtr5g079680 Medicago truncatula HOM05D004237 ORTHO05D005002 4.3e-83 312.4 339 61.7
Cpa.g.sc118.40 Carica papaya HOM05D004237 ORTHO05D005002 1.2e-82 310.8 361 57.1
Sed0014224 Sechium edule HOM05D004237 ORTHO05D005002 7.6e-80 301.6 390 54.1
Migut.H00265 Erythranthe guttata HOM05D004237 ORTHO05D005002 5.4e-78 295.4 395 46.8
Aqoxy5G01640 Aquilegia oxysepala HOM05D004237 ORTHO05D005002 2.7e-77 293.1 400 51.2
Eucgr.F02819 Eucalyptus grandis HOM05D004237 ORTHO05D005002 6.0e-77 292.0 433 45.3
Nn3g18884 Nelumbo nucifera HOM05D004237 ORTHO05D005002 1.5e-75 287.3 406 48.5
MELO3C020294.2 Cucumis melo HOM05D004237 ORTHO05D005002 3.3e-75 286.2 412 50.7
Lsat_1_v5_gn_4_154701 Lactuca sativa HOM05D004237 ORTHO05D005002 2.8e-74 283.1 389 49.6
PGR004G2154 Punica granatum HOM05D004237 ORTHO05D005002 4.8e-74 282.3 412 49.3
ClCG05G010910 Citrullus lanatus HOM05D004237 ORTHO05D005002 2.4e-73 280.0 411 49.4
SHI19441 Sapria himalayana HOM05D004237 ORTHO05D005002 5.3e-73 278.9 389 45.0
QL11p004173 Quercus lobata HOM05D004237 ORTHO05D005002 1.2e-72 277.7 407 46.9
CsaV3_3G021670 Cucumis sativus L. HOM05D004237 ORTHO05D005002 5.8e-72 275.4 410 49.8
CANSAT54G2538 Cannabis sativa HOM05D004237 ORTHO05D005002 7.6e-72 275.0 426 47.7
SGA_v2.0_scaffold149G36490 Striga asiatica HOM05D004237 ORTHO05D005002 7.6e-72 275.0 360 47.5
Hma1.2p1_3512F.1_g336510 Hydrangea macrophylla HOM05D004237 ORTHO05D005002 2.2e-71 273.5 357 49.9
unitig_899.g14517 Utricularia gibba HOM05D004236 ORTHO05D004903 5.3e-65 252.3 380 45.8
Nitab4.5_0004399g0090 Nicotiana tabacum HOM05D004237 ORTHO05D005002 4.5e-56 222.6 296 58.1
Peaxi162Scf00003g00001 Petunia axillaris HOM05D004237 ORTHO05D005002 1.1e-51 208.0 296 53.7
MBI08_g18909_MAGBIO Magnolia biondii HOM05D004237 ORTHO05D005002 1.4e-46 191.0 124 71.0
CDE02G0048 Ceratophyllum demersum HOM05D004237 ORTHO05D005002 5.5e-46 189.1 226 47.8
CDE09G1075 Ceratophyllum demersum HOM05D004237 ORTHO05D005002 1.2e-45 188.0 342 38.0
Lj2P435T33 Lonicera japonica HOM05D004237 ORTHO05D005002 1.1e-41 174.9 195 65.1
MBI11_g07416_MAGBIO Magnolia biondii HOM05D004237 ORTHO05D005002 4.5e-40 169.5 121 62.8
Mapoly0008s0013 Marchantia polymorpha HOM05D004237 ORTHO05D005002 4.5e-40 169.5 122 62.3
Sc13g0000310 Simmondsia chinensis HOM05D004237 ORTHO05D005002 1.1e-38 164.9 137 56.9
SGA_v2.0_scaffold31G12582 Striga asiatica HOM05D004237 ORTHO05D005002 4.2e-38 162.9 121 59.5
SEGI_20207 Sequoiadendron giganteum HOM05D004237 ORTHO05D005002 5.5e-38 162.5 122 59.0
AUR62023195 Chenopodium quinoa HOM05D004237 ORTHO05D005002 7.2e-38 162.2 274 44.5
Eucgr.H02692 Eucalyptus grandis HOM05D004237 ORTHO05D005002 9.4e-38 161.8 140 53.6
ATR0561G250 Amborella trichopoda HOM05D004237 ORTHO05D005002 2.7e-37 160.2 122 57.4
PGSC0003DMG400026424 Solanum tuberosum HOM05D004237 ORTHO05D005002 3.6e-37 159.8 122 59.0
TAR636G2161 Trochodendron aralioides HOM05D004237 ORTHO05D005002 4.6e-37 159.5 128 57.0
Oeu063463.1 Olea europaea HOM05D004237 ORTHO05D005002 1.0e-36 158.3 123 56.9
Peaxi162Scf00047g00110 Petunia axillaris HOM05D004237 ORTHO05D005002 1.4e-36 157.9 121 59.5
GSVIVG01021000001 Vitis vinifera HOM05D004237 ORTHO05D005002 3.0e-36 156.8 367 38.1
ATR0743G026 Amborella trichopoda HOM05D004237 ORTHO05D005002 5.1e-36 156.0 477 35.2
CBR_g29388 Chara braunii HOM05D004237 ORTHO05D005002 5.1e-36 156.0 121 56.2
Cpa.g.sc83.32 Carica papaya HOM05D004237 ORTHO05D005002 6.7e-36 155.6 123 58.5
Ca_17976_v3 Cicer arietinum L. HOM05D004237 ORTHO05D005002 6.7e-36 155.6 127 56.7
Phvul.003G050200 Phaseolus vulgaris HOM05D004237 ORTHO05D005002 6.7e-36 155.6 126 56.3
Solyc09g092210.4 Solanum lycopersicum HOM05D004237 ORTHO05D005002 6.7e-36 155.6 122 58.2
Sopen09g035130 Solanum pennellii HOM05D004237 ORTHO05D005002 6.7e-36 155.6 122 58.2
arahy.Tifrunner.gnm1.ann1.BLV0FA Arachis hypogaea HOM05D004237 ORTHO05D005002 8.8e-36 155.2 128 56.2
arahy.Tifrunner.gnm1.ann1.T9JHLZ Arachis hypogaea HOM05D004237 ORTHO05D005002 8.8e-36 155.2 128 56.2
Lj4g0001711 Lotus japonicus HOM05D004237 ORTHO05D005002 8.8e-36 155.2 128 55.5
Oeu025033.1 Olea europaea HOM05D004237 ORTHO05D005002 8.8e-36 155.2 120 58.3
Atru.chr4.1600 Acer truncatum HOM05D004237 ORTHO05D005002 1.1e-35 154.8 124 57.3
MSTRG.21980 Avicennia marina HOM05D004237 ORTHO05D005002 1.1e-35 154.8 122 57.4
Medtr8g085190 Medicago truncatula HOM05D004237 ORTHO05D005002 1.1e-35 154.8 123 57.7
Nitab4.5_0007828g0040 Nicotiana tabacum HOM05D004237 ORTHO05D005002 1.1e-35 154.8 123 56.9
Actinidia11451 Actinidia chinensis HOM05D004237 ORTHO05D005002 1.5e-35 154.5 121 57.0
Cfa014954 Carpinus fangiana HOM05D004237 ORTHO05D005002 1.5e-35 154.5 123 57.7
Rhsim02G0061200 Rhododendron simsii HOM05D004237 ORTHO05D005002 1.5e-35 154.5 121 57.9
RhsimUnG0035800 Rhododendron simsii HOM05D004237 ORTHO05D005002 1.5e-35 154.5 121 57.9
vmacro15560 Vaccinium macrocarpon HOM05D004237 ORTHO05D005002 1.5e-35 154.5 121 57.9
CiPaw.01G118000 Carya illinoinensis HOM05D004237 ORTHO05D005002 2.0e-35 154.1 125 56.0
CAN.G1565.17 Capsicum annuum HOM05D004237 ORTHO05D005002 2.5e-35 153.7 122 58.2
Haze_11643 Corylus avellana HOM05D004237 ORTHO05D005002 2.5e-35 153.7 123 57.7
Psat7g073000 Pisum sativum HOM05D004237 ORTHO05D005002 2.5e-35 153.7 126 56.3
VMungo0251G2499 Vigna mungo HOM05D004237 ORTHO05D005002 3.3e-35 153.3 126 55.6
Dinv27207 Davidia involucrata HOM05D004237 ORTHO05D005002 4.3e-35 152.9 121 57.0
TPR.G11799 Trifolium pratense HOM05D004237 ORTHO05D005002 5.7e-35 152.5 131 55.0
CSS0022501 Camellia sinensis var. sinensis HOM05D004237 ORTHO05D005002 7.4e-35 152.1 121 57.0
Duzib212G0922 Durio zibethinus HOM05D004237 ORTHO05D005002 9.7e-35 151.8 123 56.9
FAN12G1632 Fragaria x ananassa HOM05D004237 ORTHO05D005002 9.7e-35 151.8 127 55.1
Thecc.04G196500 Theobroma cacao HOM05D004237 ORTHO05D005002 9.7e-35 151.8 125 56.8
unitig_45.g31537 Utricularia gibba HOM05D004237 ORTHO05D005002 9.7e-35 151.8 121 55.4
unitig_578.g16513 Utricularia gibba HOM05D004237 ORTHO05D005002 9.7e-35 151.8 121 55.4
MELO3C020354.2 Cucumis melo HOM05D004237 ORTHO05D005002 1.3e-34 151.4 127 54.3
Gohir.A10G128300 Gossypium hirsutum HOM05D004237 ORTHO05D005002 1.3e-34 151.4 125 56.8
Glyma.05G153300 Glycine max HOM05D004237 ORTHO05D005002 2.2e-34 150.6 202 42.6
Potri.001G318600 Populus trichocarpa HOM05D004237 ORTHO05D005002 2.2e-34 150.6 129 54.3
Potri.017G058200 Populus trichocarpa HOM05D004237 ORTHO05D005002 2.2e-34 150.6 128 53.9
Sabra17G0051800 Salix brachista HOM05D004237 ORTHO05D005002 2.2e-34 150.6 128 53.9
CANSAT78G0306 Cannabis sativa HOM05D004237 ORTHO05D005002 2.8e-34 150.2 131 53.4
Dinv38185 Davidia involucrata HOM05D004237 ORTHO05D005002 2.8e-34 150.2 121 56.2
FvH4_4g13400 Fragaria vesca HOM05D004237 ORTHO05D005002 2.8e-34 150.2 127 54.3
CsaV3_2G011170 Cucumis sativus L. HOM05D004237 ORTHO05D005002 3.7e-34 149.8 127 53.5
DCAR_030819 Daucus carota HOM05D004237 ORTHO05D005002 3.7e-34 149.8 119 56.3
Hma1.2p1_2958F.1_g330800 Hydrangea macrophylla HOM05D004237 ORTHO05D005002 3.7e-34 149.8 122 54.9
Lsat_1_v5_gn_2_45661 Lactuca sativa HOM05D004237 ORTHO05D005002 3.7e-34 149.8 122 54.1
Prupe.1G163000 Prunus persica HOM05D004237 ORTHO05D005002 3.7e-34 149.8 132 53.0
Sabra16G0201600 Salix brachista HOM05D004237 ORTHO05D005002 3.7e-34 149.8 129 53.5
Ciclev10004964m.g Citrus clementina HOM05D004237 ORTHO05D005002 8.2e-34 148.7 124 55.6
Manes.15G056100 Manihot esculenta HOM05D004237 ORTHO05D005002 1.1e-33 148.3 128 53.9
FAN07G1461 Fragaria x ananassa HOM05D004237 ORTHO05D005002 1.4e-33 147.9 127 53.5
CDE05G0646 Ceratophyllum demersum HOM05D004237 ORTHO05D005002 1.8e-33 147.5 114 57.0
Lalb_Chr07g0186771 Lupinus albus HOM05D004237 ORTHO05D005002 2.4e-33 147.1 120 55.8
MD04G1016300 Malus domestica HOM05D004237 ORTHO05D005002 2.4e-33 147.1 145 48.3
Aqoxy2G03968 Aquilegia oxysepala HOM05D004237 ORTHO05D005002 4.1e-33 146.4 140 50.0
RcHm_v2.0_Chr4g0413771 Rosa chinensis HOM05D004237 ORTHO05D005002 4.1e-33 146.4 131 51.9
SEGI_05374 Sequoiadendron giganteum HOM05D004237 ORTHO05D005002 6.9e-33 145.6 421 35.9
Actinidia28992 Actinidia chinensis HOM05D004237 ORTHO05D005002 2.0e-32 144.1 121 53.7
MD13G1282300 Malus domestica HOM05D004237 ORTHO05D005002 2.0e-32 144.1 140 47.9
HPP92_024243 Vanilla planifolia HOM05D004237 ORTHO05D005002 1.0e-31 141.7 154 46.1
HanXRQChr15g0484241 Helianthus annuus HOM05D004237 ORTHO05D005002 1.9e-30 137.5 373 34.9
RcHm_v2.0_Chr1g0334211 Rosa chinensis HOM05D004237 ORTHO05D005002 7.2e-30 135.6 259 36.3
QL06p026437 Quercus lobata HOM05D004237 ORTHO05D005002 2.1e-29 134.0 100 60.0
Manes.03G145100 Manihot esculenta HOM05D004237 ORTHO05D005002 1.4e-28 131.3 422 32.2
Migut.N00416 Erythranthe guttata HOM05D004237 ORTHO05D005002 6.7e-28 129.0 99 58.6
COL.COLO4_20213 Corchorus olitorius HOM05D004237 ORTHO05D005002 1.1e-27 128.3 109 55.0
AUR62020847 Chenopodium quinoa HOM05D004237 ORTHO05D005002 9.7e-27 125.2 97 58.8
Gohir.D10G137600 Gossypium hirsutum HOM05D004237 ORTHO05D005002 9.7e-27 125.2 106 55.7
Gorai.011G152800 Gossypium raimondii HOM05D004237 ORTHO05D005002 9.7e-27 125.2 106 55.7
Sed0001983 Sechium edule HOM05D004237 ORTHO05D005002 1.1e-25 121.7 108 51.9
RcHm_v2.0_Chr1g0333491 Rosa chinensis HOM05D003866 ORTHO05D004508 2.6e-24 117.1 95 63.2
ECA238G4613 Erigeron canadensis HOM05D004237 ORTHO05D005002 6.1e-21 105.9 386 32.4
PSO017G6634 Papaver somniferum HOM05D004237 ORTHO05D005002 1.1e-14 85.1 113 42.5
RcHm_v2.0_Chr1g0333501 Rosa chinensis HOM05D004237 ORTHO05D005002 2.1e-13 80.9 172 41.3


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