Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.008G217000 Phaseolus vulgaris HOM05D005709 ORTHO05D006306 3.6e-32 141.0 70 100.0
Glyma.09G199500 Glycine max HOM05D005709 ORTHO05D006306 5.1e-23 110.5 61 91.8
VMungo1215G1966 Vigna mungo HOM05D005709 ORTHO05D006306 6.7e-23 110.2 61 90.2
Glyma.01G022800 Glycine max HOM05D005709 ORTHO05D006306 1.5e-22 109.0 61 90.2
MBI16_g12470_MAGBIO Magnolia biondii HOM05D005709 ORTHO05D006306 1.7e-21 105.5 63 82.5
MBI16_g19593_MAGBIO Magnolia biondii HOM05D005709 ORTHO05D006306 3.7e-21 104.4 62 82.3
Lalb_Chr09g0325971 Lupinus albus HOM05D005709 ORTHO05D006306 2.4e-20 101.7 61 80.3
Ca_22702_v3 Cicer arietinum L. HOM05D005709 ORTHO05D006306 4.1e-20 100.9 61 85.2
Psat2g082080 Pisum sativum HOM05D005709 ORTHO05D006306 9.1e-20 99.8 61 82.0
QL06p035832 Quercus lobata HOM05D005709 ORTHO05D006306 9.1e-20 99.8 58 87.9
RcHm_v2.0_Chr2g0111161 Rosa chinensis HOM05D005709 ORTHO05D006306 9.1e-20 99.8 61 83.6
Haze_03880 Corylus avellana HOM05D005709 ORTHO05D006306 2.0e-19 98.6 61 83.6
Cfa006877 Carpinus fangiana HOM05D005709 ORTHO05D006306 2.6e-19 98.2 61 83.6
Medtr5g032050 Medicago truncatula HOM05D005709 ORTHO05D006306 2.6e-19 98.2 61 83.6
Lj2g0012290 Lotus japonicus HOM05D005709 ORTHO05D006306 3.4e-19 97.8 61 82.0
MD11G1164000 Malus domestica HOM05D005709 ORTHO05D006306 5.9e-19 97.1 61 82.0
arahy.Tifrunner.gnm1.ann1.7T2SE7 Arachis hypogaea HOM05D005709 ORTHO05D006306 7.7e-19 96.7 58 86.2
arahy.Tifrunner.gnm1.ann1.IH5V0S Arachis hypogaea HOM05D005709 ORTHO05D006306 7.7e-19 96.7 58 86.2
Dinv13597 Davidia involucrata HOM05D005709 ORTHO05D006306 7.7e-19 96.7 58 84.5
FAN28G2327 Fragaria x ananassa HOM05D005709 ORTHO05D006306 7.7e-19 96.7 58 84.5
AUR62017977 Chenopodium quinoa HOM05D005709 ORTHO05D006306 1.3e-18 95.9 55 85.5
ClCG10G007760 Citrullus lanatus HOM05D005709 ORTHO05D006306 1.3e-18 95.9 61 77.0
FvH4_1g19610 Fragaria vesca HOM05D005709 ORTHO05D006306 2.2e-18 95.1 58 82.8
TPR.G36731 Trifolium pratense HOM05D005709 ORTHO05D006306 2.2e-18 95.1 61 80.3
CiPaw.07G047300 Carya illinoinensis HOM05D005709 ORTHO05D006306 2.9e-18 94.7 62 80.6
Cc07_g14050 Coffea canephora HOM05D005709 ORTHO05D006306 3.8e-18 94.4 61 78.7
vmacro18555 Vaccinium macrocarpon HOM05D005709 ORTHO05D006306 5.0e-18 94.0 75 66.7
vmacro21794 Vaccinium macrocarpon HOM05D005709 ORTHO05D006306 5.0e-18 94.0 75 66.7
MELO3C016416.2 Cucumis melo HOM05D005709 ORTHO05D006306 6.5e-18 93.6 61 75.4
Nn3g18597 Nelumbo nucifera HOM05D005709 ORTHO05D006306 6.5e-18 93.6 60 76.7
Solyc11g010660.2 Solanum lycopersicum HOM05D005709 ORTHO05D006306 8.5e-18 93.2 61 75.4
Sopen11g005470 Solanum pennellii HOM05D005709 ORTHO05D006306 8.5e-18 93.2 61 75.4
Thecc.01G090000 Theobroma cacao HOM05D005709 ORTHO05D006306 8.5e-18 93.2 67 73.1
CSS0001510 Camellia sinensis var. sinensis HOM05D005709 ORTHO05D006306 1.1e-17 92.8 58 81.0
CANSAT01G1032 Cannabis sativa HOM05D005709 ORTHO05D006306 1.1e-17 92.8 61 75.4
CsaV3_3G006890 Cucumis sativus L. HOM05D005709 ORTHO05D006306 1.1e-17 92.8 61 75.4
MD03G1143200 Malus domestica HOM05D005709 ORTHO05D006306 1.1e-17 92.8 58 81.0
vmacro21792 Vaccinium macrocarpon HOM05D005709 ORTHO05D006306 1.1e-17 92.8 58 81.0
Actinidia28821 Actinidia chinensis HOM05D005709 ORTHO05D006306 1.4e-17 92.4 58 81.0
FAN26G3468 Fragaria x ananassa HOM05D005709 ORTHO05D006306 1.4e-17 92.4 58 82.8
Nitab4.5_0007624g0020 Nicotiana tabacum HOM05D005709 ORTHO05D006306 1.4e-17 92.4 61 75.4
Peaxi162Scf00474g00732 Petunia axillaris HOM05D005709 ORTHO05D006306 1.4e-17 92.4 61 75.4
Prupe.6G202100 Prunus persica HOM05D005709 ORTHO05D006306 1.4e-17 92.4 55 83.6
Rhsim08G0016800 Rhododendron simsii HOM05D005709 ORTHO05D006306 1.4e-17 92.4 56 83.9
Duzib187G1076 Durio zibethinus HOM05D005709 ORTHO05D006306 1.9e-17 92.0 61 75.4
Gohir.D03G035800 Gossypium hirsutum HOM05D005709 ORTHO05D006306 1.9e-17 92.0 61 77.0
Gorai.003G037400 Gossypium raimondii HOM05D005709 ORTHO05D006306 1.9e-17 92.0 61 77.0
Lju188A3T31 Lonicera japonica HOM05D005709 ORTHO05D006306 1.9e-17 92.0 60 78.3
Hund16527 Selenicereus undatus HOM05D005709 ORTHO05D006306 1.9e-17 92.0 57 78.9
EL10Ac6g15201 Beta vulgaris HOM05D005709 ORTHO05D006306 2.5e-17 91.7 52 86.5
vmacro18553 Vaccinium macrocarpon HOM05D005709 ORTHO05D006306 3.2e-17 91.3 69 68.1
AUR62003667 Chenopodium quinoa HOM05D005709 ORTHO05D006306 4.2e-17 90.9 55 85.5
Gohir.A02G144800 Gossypium hirsutum HOM05D005709 ORTHO05D006306 4.2e-17 90.9 61 75.4
PGSC0003DMG400016130 Solanum tuberosum HOM05D005709 ORTHO05D006306 4.2e-17 90.9 61 75.4
TAR625G0141 Trochodendron aralioides HOM05D005709 ORTHO05D006306 4.2e-17 90.9 64 71.9
COL.COLO4_27357 Corchorus olitorius HOM05D005709 ORTHO05D006306 5.5e-17 90.5 57 78.9
Sabra06G0105500 Salix brachista HOM05D005709 ORTHO05D006306 5.5e-17 90.5 61 77.0
Manes.12G125900 Manihot esculenta HOM05D005709 ORTHO05D006306 7.2e-17 90.1 61 77.0
Potri.006G134400 Populus trichocarpa HOM05D005709 ORTHO05D006306 1.2e-16 89.4 60 76.7
Ciclev10025155m.g Citrus clementina HOM05D005709 ORTHO05D006306 1.6e-16 89.0 59 74.6
Nitab4.5_0013799g0010 Nicotiana tabacum HOM05D005709 ORTHO05D006306 1.6e-16 89.0 68 70.6
Aqoxy5G01380 Aquilegia oxysepala HOM05D005709 ORTHO05D006306 2.1e-16 88.6 58 77.6
Ah.02g123530 Amaranthus hybridus HOM05D005709 ORTHO05D006306 3.6e-16 87.8 60 75.0
Eucgr.H04723 Eucalyptus grandis HOM05D005709 ORTHO05D006306 3.6e-16 87.8 59 71.2
TWI74G1439 Tripterygium wilfordii HOM05D005709 ORTHO05D006306 3.6e-16 87.8 61 75.4
Cpa.g.sc55.19 Carica papaya HOM05D005709 ORTHO05D006306 4.7e-16 87.4 52 82.7
PGR102G2444 Punica granatum HOM05D005709 ORTHO05D006306 2.3e-15 85.1 55 72.7
DCAR_010090 Daucus carota HOM05D005709 ORTHO05D006306 3.0e-15 84.7 61 67.2
CAN.G1344.19 Capsicum annuum HOM05D005709 ORTHO05D006306 5.2e-15 84.0 55 76.4
ECA238G0695 Erigeron canadensis HOM05D005709 ORTHO05D006306 1.1e-14 82.8 57 71.9
Sed0005807 Sechium edule HOM05D005709 ORTHO05D006306 1.5e-14 82.4 49 83.7
PSO170G3043 Papaver somniferum HOM05D005709 ORTHO05D006306 2.6e-14 81.6 55 74.5
ATR0763G252 Amborella trichopoda HOM05D005709 ORTHO05D006306 3.3e-14 81.3 56 66.1
PSO017G1508 Papaver somniferum HOM05D005709 ORTHO05D006306 3.3e-14 81.3 55 72.7
PSO675G1794 Papaver somniferum HOM05D005709 ORTHO05D006306 4.4e-14 80.9 55 74.5
Migut.K00802 Erythranthe guttata HOM05D005709 ORTHO05D006306 9.7e-14 79.7 60 65.0
Oeu002141.1 Olea europaea HOM05D005709 ORTHO05D006306 9.7e-14 79.7 61 65.6
HPP92_015331 Vanilla planifolia HOM05D005709 ORTHO05D006306 1.3e-13 79.3 60 63.3
HanXRQChr14g0442981 Helianthus annuus HOM05D005709 ORTHO05D006306 2.8e-13 78.2 54 72.2
SGA_v2.0_scaffold115G32123 Striga asiatica HOM05D005709 ORTHO05D006306 3.7e-13 77.8 61 67.2
Carub.0008s2634 Capsella rubella HOM05D005709 ORTHO05D006306 4.8e-13 77.4 59 59.3
SEGI_11890 Sequoiadendron giganteum HOM05D005709 ORTHO05D006306 4.8e-13 77.4 63 61.9
SEGI_13404 Sequoiadendron giganteum HOM05D005709 ORTHO05D006306 4.8e-13 77.4 63 61.9
Sp2g28570 Schrenkiella parvula HOM05D005709 ORTHO05D006306 6.3e-13 77.0 57 59.6
BolC3t18312H Brassica oleracea HOM05D005709 ORTHO05D006306 8.2e-13 76.6 57 61.4
TAR381G1594 Trochodendron aralioides HOM05D005709 ORTHO05D006306 8.2e-13 76.6 58 70.7
AT5G65490 Arabidopsis thaliana HOM05D005709 ORTHO05D006306 1.1e-12 76.3 59 61.0
Thhalv10003796m.g Eutrema salsugineum HOM05D005709 ORTHO05D006306 1.8e-12 75.5 50 68.0
Os08g0447200 Oryza sativa ssp. japonica HOM05D005709 ORTHO05D006306 1.8e-12 75.5 58 65.5
AL8G43070 Arabidopsis lyrata HOM05D005709 ORTHO05D006306 2.4e-12 75.1 60 58.3
CARHR279470 Cardamine hirsuta HOM05D005709 ORTHO05D006306 3.1e-12 74.7 59 59.3
HPP92_015350 Vanilla planifolia HOM05D005709 ORTHO05D006306 3.1e-12 74.7 57 63.2
SMO207G0001 Selaginella moellendorffii HOM05D005709 ORTHO05D006306 9.1e-12 73.2 59 57.6
Aa31LG1G16510 Aethionema arabicum HOM05D005709 ORTHO05D006306 2.0e-11 72.0 56 57.1
BcaC01g02777 Brassica carinata HOM05D005709 ORTHO05D006306 5.9e-11 70.5 44 70.5
A06p32320 Brassica napus HOM05D005709 ORTHO05D006306 5.9e-11 70.5 44 70.5
C03p60550 Brassica napus HOM05D005709 ORTHO05D006306 5.9e-11 70.5 44 70.5
BraA06t26158Z Brassica rapa HOM05D005709 ORTHO05D006306 5.9e-11 70.5 44 70.5
SMO137G0394 Selaginella moellendorffii HOM05D005709 ORTHO05D006306 1.0e-10 69.7 59 55.9
Zm00001eb040880 Zea mays HOM05D005709 ORTHO05D006306 1.3e-10 69.3 46 67.4
SHI21884 Sapria himalayana HOM05D005709 ORTHO05D006306 1.5e-09 65.9 49 63.3
Atru.chr3.1240 Acer truncatum HOM05D005709 ORTHO05D006306 1.9e-09 65.5 55 56.4
SMO137G0085 Selaginella moellendorffii HOM05D005709 ORTHO05D006306 5.5e-09 63.9 59 54.2
unitig_32.g11802 Utricularia gibba HOM05D005709 ORTHO05D006306 5.5e-09 63.9 44 63.6
AagrBONN_evm.TU.Sc2ySwM_368.1496 Anthoceros agrestis HOM05D005709 ORTHO05D006306 1.6e-08 62.4 46 58.7
Nitab4.5_0001235g0070 Nicotiana tabacum HOM05D005280 ORTHO05D006253 2.7e-08 61.6 64 57.8
CBR_g78875 Chara braunii HOM05D005709 ORTHO05D006306 5.2e-07 57.4 46 56.5
PRCOL_00002122 Prasinoderma coloniale HOM05D005709 ORTHO05D006306 6.7e-07 57.0 55 56.4
C02p64140 Brassica napus HOM05D005709 ORTHO05D006306 3.3e-06 54.7 68 45.6
BolC2t12478H Brassica oleracea HOM05D005709 ORTHO05D006306 3.3e-06 54.7 60 46.7
Mapoly0135s0033 Marchantia polymorpha HOM05D005709 ORTHO05D006306 4.4e-06 54.3 39 66.7
Pp3c1_9650 Physcomitrium patens HOM05D005709 ORTHO05D006306 4.4e-06 54.3 42 59.5


User provided reference genes

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