Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.008G211400 Phaseolus vulgaris HOM05D002897 ORTHO05D008718 5.6e-136 487.6 255 100.0
VMungo0647G1784 Vigna mungo HOM05D002897 ORTHO05D008718 1.4e-123 446.4 255 89.0
Glyma.14G046500 Glycine max HOM05D002897 ORTHO05D008718 2.0e-117 426.0 255 85.9
Glyma.02G270500 Glycine max HOM05D002897 ORTHO05D008718 1.3e-116 423.3 255 85.1
Ca_06120_v3 Cicer arietinum L. HOM05D002897 ORTHO05D008718 5.9e-101 371.3 258 75.2
Medtr5g085980 Medicago truncatula HOM05D002897 ORTHO05D008718 5.0e-100 368.2 252 76.2
Psat4g114440 Pisum sativum HOM05D002897 ORTHO05D008718 1.0e-97 360.5 252 72.6
TPR.G14446 Trifolium pratense HOM05D002897 ORTHO05D008718 1.0e-97 360.5 258 73.3
LjContig00564g0002899 Lotus japonicus HOM05D002897 ORTHO05D008718 3.0e-97 359.0 257 74.7
Lalb_Chr04g0249891 Lupinus albus HOM05D002897 ORTHO05D008718 1.5e-96 356.7 258 71.7
arahy.Tifrunner.gnm1.ann1.QRVI7E Arachis hypogaea HOM05D002897 ORTHO05D008718 2.8e-95 352.4 265 70.2
arahy.Tifrunner.gnm1.ann1.YEZ88R Arachis hypogaea HOM05D002897 ORTHO05D008718 1.1e-94 350.5 265 69.8
MELO3C018838.2 Cucumis melo HOM05D002897 ORTHO05D008718 2.5e-83 312.8 258 64.0
Prupe.3G212700 Prunus persica HOM05D002897 ORTHO05D008718 1.6e-82 310.1 259 66.4
Sed0013072 Sechium edule HOM05D002897 ORTHO05D008718 2.7e-82 309.3 257 64.2
Cfa014332 Carpinus fangiana HOM05D002897 ORTHO05D008718 3.6e-82 308.9 257 64.6
PGSC0003DMG400000696 Solanum tuberosum HOM05D002897 ORTHO05D008718 1.4e-81 307.0 257 61.9
ClCG02G002140 Citrullus lanatus HOM05D002897 ORTHO05D008718 3.0e-81 305.8 258 63.6
Duzib138G1172 Durio zibethinus HOM05D002897 ORTHO05D008718 5.2e-81 305.1 251 64.1
Peaxi162Scf00921g00023 Petunia axillaris HOM05D002897 ORTHO05D008718 6.8e-81 304.7 258 62.8
Solyc07g049200.4 Solanum lycopersicum HOM05D002897 ORTHO05D008718 6.8e-81 304.7 257 61.5
Sopen07g025210 Solanum pennellii HOM05D002897 ORTHO05D008718 6.8e-81 304.7 257 61.5
CsaV3_7G003360 Cucumis sativus L. HOM05D002897 ORTHO05D008718 2.0e-80 303.1 259 62.5
QL08p031170 Quercus lobata HOM05D002897 ORTHO05D008718 2.6e-80 302.8 259 61.0
Cpa.g.sc132.3 Carica papaya HOM05D002897 ORTHO05D008718 4.4e-80 302.0 257 63.4
FAN05G4893 Fragaria x ananassa HOM05D002897 ORTHO05D008718 9.8e-80 300.8 259 61.4
Nitab4.5_0012091g0010 Nicotiana tabacum HOM05D002897 ORTHO05D008718 1.3e-79 300.4 253 63.6
TAR624G0001 Trochodendron aralioides HOM05D002897 ORTHO05D008718 1.3e-79 300.4 255 62.4
Thecc.01G180000 Theobroma cacao HOM05D002897 ORTHO05D008718 1.7e-79 300.1 256 62.1
THA.LOC104826141 Tarenaya hassleriana HOM05D002897 ORTHO05D008718 2.2e-79 299.7 253 63.2
FAN02G2770 Fragaria x ananassa HOM05D002897 ORTHO05D008718 4.8e-79 298.5 259 60.6
CiPaw.03G157200 Carya illinoinensis HOM05D002897 ORTHO05D008718 6.3e-79 298.1 258 62.0
Potri.014G156700 Populus trichocarpa HOM05D002897 ORTHO05D008718 1.1e-78 297.4 257 61.9
FvH4_6g42620 Fragaria vesca HOM05D002897 ORTHO05D008718 1.4e-78 297.0 259 60.2
Ciclev10016301m.g Citrus clementina HOM05D002897 ORTHO05D008718 2.4e-78 296.2 262 62.2
Haze_12787 Corylus avellana HOM05D002897 ORTHO05D008718 2.4e-78 296.2 277 58.8
Nn1g07262 Nelumbo nucifera HOM05D002897 ORTHO05D008718 3.1e-78 295.8 256 60.5
GSVIVG01030483001 Vitis vinifera HOM05D002897 ORTHO05D008718 4.1e-78 295.4 259 59.8
Manes.13G067750 Manihot esculenta HOM05D002897 ORTHO05D008718 9.1e-78 294.3 257 62.6
Manes.13G067751 Manihot esculenta HOM05D002897 ORTHO05D008718 9.1e-78 294.3 257 62.6
Nitab4.5_0000482g0070 Nicotiana tabacum HOM05D002897 ORTHO05D008718 1.6e-77 293.5 258 62.4
RcHm_v2.0_Chr2g0158471 Rosa chinensis HOM05D002897 ORTHO05D008718 2.7e-77 292.7 256 60.2
Gorai.007G171100 Gossypium raimondii HOM05D002897 ORTHO05D008718 3.5e-77 292.4 256 60.5
Gohir.D11G160500 Gossypium hirsutum HOM05D002897 ORTHO05D008718 1.0e-76 290.8 256 60.2
Hma1.2p1_2044F.1_g312350 Hydrangea macrophylla HOM05D002897 ORTHO05D008718 1.0e-76 290.8 262 63.0
TWI18G1283 Tripterygium wilfordii HOM05D002897 ORTHO05D008718 1.0e-76 290.8 258 60.1
Atru.chr6.3235 Acer truncatum HOM05D002897 ORTHO05D008718 1.3e-76 290.4 256 60.9
Sabra14G0118500 Salix brachista HOM05D002897 ORTHO05D008718 1.7e-76 290.0 257 61.1
Actinidia09731 Actinidia chinensis HOM05D002897 ORTHO05D008718 3.8e-76 288.9 257 61.9
Gohir.A11G153700 Gossypium hirsutum HOM05D002897 ORTHO05D008718 3.8e-76 288.9 256 59.4
BcaB07g32946 Brassica carinata HOM05D002897 ORTHO05D008718 5.0e-76 288.5 254 58.3
Sc06g0009610 Simmondsia chinensis HOM05D002897 ORTHO05D008718 6.6e-76 288.1 260 59.6
AT1G05060 Arabidopsis thaliana HOM05D002897 ORTHO05D008718 1.9e-75 286.6 256 59.8
Carub.0001s0433 Capsella rubella HOM05D002897 ORTHO05D008718 3.3e-75 285.8 255 59.2
Sp1g03930 Schrenkiella parvula HOM05D002897 ORTHO05D008718 3.3e-75 285.8 254 59.1
AL1G14810 Arabidopsis lyrata HOM05D002897 ORTHO05D008718 7.2e-75 284.6 256 59.0
CSS0022002 Camellia sinensis var. sinensis HOM05D002897 ORTHO05D008718 3.6e-74 282.3 256 62.1
AUR62035641 Chenopodium quinoa HOM05D002897 ORTHO05D008718 3.6e-74 282.3 254 59.4
Thhalv10008572m.g Eutrema salsugineum HOM05D002897 ORTHO05D008718 3.6e-74 282.3 254 57.1
BolC5t31920H Brassica oleracea HOM05D002897 ORTHO05D008718 4.7e-74 282.0 254 57.1
BcaC05g27288 Brassica carinata HOM05D002897 ORTHO05D008718 8.0e-74 281.2 254 57.5
BraA09t38920Z Brassica rapa HOM05D002897 ORTHO05D008718 8.0e-74 281.2 254 57.5
vmacro12177 Vaccinium macrocarpon HOM05D002897 ORTHO05D008718 8.0e-74 281.2 256 60.5
Rhsim06G0166000 Rhododendron simsii HOM05D002897 ORTHO05D008718 6.8e-73 278.1 268 60.1
MSTRG.14141 Avicennia marina HOM05D002897 ORTHO05D008718 1.5e-72 276.9 259 57.9
Eucgr.A01101 Eucalyptus grandis HOM05D002897 ORTHO05D008718 2.0e-72 276.6 266 56.8
SalBow1G3579 Salvia bowleyana HOM05D002897 ORTHO05D008718 3.4e-72 275.8 259 59.5
Aqoxy1G03476 Aquilegia oxysepala HOM05D002897 ORTHO05D008718 7.5e-72 274.6 260 60.4
Migut.H01234 Erythranthe guttata HOM05D002897 ORTHO05D008718 1.3e-71 273.9 269 57.2
SalBow1G2496 Salvia bowleyana HOM05D002897 ORTHO05D008718 8.3e-71 271.2 259 57.9
CARHR004510 Cardamine hirsuta HOM05D002897 ORTHO05D008718 1.4e-70 270.4 260 55.8
Oeu051891.2 Olea europaea HOM05D002897 ORTHO05D008718 1.4e-70 270.4 287 55.1
EL10Ac4g07512 Beta vulgaris HOM05D002897 ORTHO05D008718 2.4e-70 269.6 261 58.2
A09p33710 Brassica napus HOM05D002897 ORTHO05D008718 1.2e-69 267.3 279 52.3
C05p31940 Brassica napus HOM05D002897 ORTHO05D008718 1.2e-69 267.3 279 52.0
AUR62017163 Chenopodium quinoa HOM05D002897 ORTHO05D008718 1.2e-69 267.3 246 56.9
Cc05_g03270 Coffea canephora HOM05D002897 ORTHO05D008718 2.0e-69 266.5 254 56.3
Dinv39736 Davidia involucrata HOM05D002897 ORTHO05D008718 3.5e-69 265.8 260 58.1
HanXRQChr12g0373611 Helianthus annuus HOM05D002897 ORTHO05D008718 5.9e-69 265.0 254 57.1
SGA_v2.0_scaffold49G18345 Striga asiatica HOM05D002897 ORTHO05D008718 7.8e-69 264.6 259 55.2
ECA234G1553 Erigeron canadensis HOM05D002897 ORTHO05D008718 8.6e-68 261.2 254 55.9
Lsat_1_v5_gn_5_123640 Lactuca sativa HOM05D002897 ORTHO05D008718 1.5e-67 260.4 256 54.7
Lj8C128G4 Lonicera japonica HOM05D002897 ORTHO05D008718 1.9e-67 260.0 259 56.8
CDE07G0516 Ceratophyllum demersum HOM05D002897 ORTHO05D008718 6.1e-66 255.0 257 52.9
MD17G1102200 Malus domestica HOM05D002897 ORTHO05D008718 1.0e-65 254.2 215 64.2
Hma1.2p1_1986F.1_g310090 Hydrangea macrophylla HOM05D002897 ORTHO05D008718 2.3e-65 253.1 205 62.4
MBI19_g24999_MAGBIO Magnolia biondii HOM05D002897 ORTHO05D008718 5.2e-65 251.9 259 56.4
Aqoxy1G03469 Aquilegia oxysepala HOM05D002897 ORTHO05D008718 6.4e-63 245.0 253 53.4
PSO210G2604 Papaver somniferum HOM05D002897 ORTHO05D008718 2.3e-60 236.5 258 49.2
Os06g0239700 Oryza sativa ssp. japonica HOM05D002897 ORTHO05D008718 6.6e-60 235.0 253 52.2
Aa31LG1G19710 Aethionema arabicum HOM05D002897 ORTHO05D008718 2.5e-59 233.0 301 45.2
Zm00001eb280010 Zea mays HOM05D002897 ORTHO05D008718 1.6e-58 230.3 254 50.8
Hma1.2p1_2044F.1_g312360 Hydrangea macrophylla HOM05D002897 ORTHO05D008718 1.5e-56 223.8 199 66.3
HPP92_017354 Vanilla planifolia HOM05D002897 ORTHO05D008718 1.7e-52 210.3 247 46.6
FAN14G2576 Fragaria x ananassa HOM05D002897 ORTHO05D008718 6.6e-52 208.4 258 49.2
DCAR_012931 Daucus carota HOM05D002897 ORTHO05D008718 8.9e-49 198.0 259 47.9
unitig_21.g21003 Utricularia gibba HOM05D002897 ORTHO05D008718 3.0e-44 183.0 159 57.2
COL.COLO4_21853 Corchorus olitorius HOM05D002897 ORTHO05D008718 9.6e-43 177.9 158 61.4
SEGI_41028 Sequoiadendron giganteum HOM05D002897 ORTHO05D008718 3.4e-40 169.5 242 40.5
CSS0034853 Camellia sinensis var. sinensis HOM05D002897 ORTHO05D008718 1.1e-33 147.9 172 51.7
AagrBONN_evm.TU.Sc2ySwM_117.2821 Anthoceros agrestis HOM05D002897 ORTHO05D008718 4.0e-33 146.0 253 38.3
ATR0059G011 Amborella trichopoda HOM05D002897 ORTHO05D008718 3.2e-30 136.3 143 54.5
Pp3c23_20260 Physcomitrium patens HOM05D002897 ORTHO05D008718 1.6e-29 134.0 270 35.6
MD06G1049400 Malus domestica HOM05D002897 ORTHO05D008718 3.5e-21 106.3 128 53.1
ATR0059G040 Amborella trichopoda HOM05D002897 ORTHO05D008718 1.2e-16 91.3 92 50.0
SMO290G0011 Selaginella moellendorffii HOM05D013342 ORTHO05D008718 9.3e-14 81.6 218 28.0
SMO356G0703 Selaginella moellendorffii HOM05D013342 ORTHO05D008718 2.1e-13 80.5 220 29.1
CANSAT64G1786 Cannabis sativa HOM05D002897 ORTHO05D008718 3.0e-12 76.6 63 57.1
HPP92_017340 Vanilla planifolia HOM05D002897 ORTHO05D008718 6.9e-09 65.5 110 38.2
Aa31sc72G10 Aethionema arabicum HOM05D002897 ORTHO05D008718 4.5e-08 62.8 134 34.3
BolC6t39233H Brassica oleracea HOM05D002897 ORTHO05D008718 1.9e-06 57.4 45 51.1


User provided reference genes

Program Settings