Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.008G206400 Phaseolus vulgaris HOM05D002419 ORTHO05D008128 2.8e-91 338.6 169 100.0
Phvul.008G172000 Phaseolus vulgaris HOM05D002419 ORTHO05D008128 7.7e-81 303.9 168 90.5
VMungo0647G2488 Vigna mungo HOM05D002419 ORTHO05D008128 3.0e-77 292.0 164 87.2
Glyma.14G041000 Glycine max HOM05D002419 ORTHO05D008128 1.1e-71 273.5 164 83.5
Phvul.008G171900 Phaseolus vulgaris HOM05D002419 ORTHO05D008128 9.7e-68 260.4 168 81.5
Ca_06160_v3 Cicer arietinum L. HOM05D002419 ORTHO05D008128 6.3e-67 257.7 162 79.0
Glyma.02G275000 Glycine max HOM05D002419 ORTHO05D008128 8.2e-67 257.3 164 80.5
LjContig00564g0025850 Lotus japonicus HOM05D002419 ORTHO05D008128 1.5e-65 253.1 162 78.4
Lalb_Chr25g0283021 Lupinus albus HOM05D002419 ORTHO05D008128 8.5e-64 247.3 164 76.2
Psat2g021880 Pisum sativum HOM05D002419 ORTHO05D008128 3.2e-63 245.4 159 78.0
Medtr5g087960 Medicago truncatula HOM05D002419 ORTHO05D008128 6.1e-62 241.1 159 77.4
TPR.G11332 Trifolium pratense HOM05D002419 ORTHO05D008128 6.1e-62 241.1 158 77.2
arahy.Tifrunner.gnm1.ann1.AUHN72 Arachis hypogaea HOM05D002419 ORTHO05D008128 1.4e-61 240.0 162 74.7
TPR.G11328 Trifolium pratense HOM05D002419 ORTHO05D008128 1.4e-61 240.0 158 75.9
Psat2g022480 Pisum sativum HOM05D002419 ORTHO05D008128 3.3e-60 235.3 157 75.2
arahy.Tifrunner.gnm1.ann1.2RF374 Arachis hypogaea HOM05D002419 ORTHO05D008128 5.0e-56 221.5 148 73.0
MD11G1129900 Malus domestica HOM05D002419 ORTHO05D008128 1.5e-52 209.9 148 67.6
Potri.006G133800 Populus trichocarpa HOM05D002419 ORTHO05D008128 1.7e-51 206.5 163 62.0
RcHm_v2.0_Chr5g0060661 Rosa chinensis HOM05D002419 ORTHO05D008128 1.7e-51 206.5 161 62.1
FAN25G2109 Fragaria x ananassa HOM05D002419 ORTHO05D008128 3.7e-51 205.3 162 62.3
FAN16G1578 Fragaria x ananassa HOM05D002419 ORTHO05D008128 1.4e-50 203.4 147 65.3
Sabra03G0090700 Salix brachista HOM05D002419 ORTHO05D008128 2.4e-50 202.6 165 60.6
GSVIVG01025134001 Vitis vinifera HOM05D002419 ORTHO05D008128 1.2e-49 200.3 145 63.4
Sabra06G0105100 Salix brachista HOM05D002419 ORTHO05D008128 3.5e-49 198.7 163 60.1
Prupe.6G094800 Prunus persica HOM05D002419 ORTHO05D008128 1.0e-48 197.2 161 60.2
Atru.chr3.3691 Acer truncatum HOM05D002419 ORTHO05D008128 3.8e-48 195.3 167 56.3
QL01p037215 Quercus lobata HOM05D002419 ORTHO05D008128 6.5e-48 194.5 162 61.7
Cfa011364 Carpinus fangiana HOM05D005177 ORTHO05D006175 8.5e-48 194.1 136 66.2
Thecc.09G260200 Theobroma cacao HOM05D002419 ORTHO05D008128 8.5e-48 194.1 138 63.8
Haze_23915 Corylus avellana HOM05D002419 ORTHO05D008128 1.9e-47 193.0 162 59.9
Cpa.g.sc139.69 Carica papaya HOM05D002419 ORTHO05D008128 5.5e-47 191.4 162 57.4
COL.COLO4_32908 Corchorus olitorius HOM05D002419 ORTHO05D008128 7.2e-47 191.0 149 61.7
Duzib170G1173 Durio zibethinus HOM05D002419 ORTHO05D008128 7.2e-47 191.0 166 57.8
CSS0035547 Camellia sinensis var. sinensis HOM05D002419 ORTHO05D008128 1.2e-46 190.3 147 60.5
Manes.11G141200 Manihot esculenta HOM05D002419 ORTHO05D008128 1.2e-46 190.3 139 65.5
vmacro14413 Vaccinium macrocarpon HOM05D002419 ORTHO05D008128 1.6e-46 189.9 168 58.9
CiPaw.13G107000 Carya illinoinensis HOM05D002419 ORTHO05D008128 2.1e-46 189.5 161 58.4
COL.COLO4_25247 Corchorus olitorius HOM05D002419 ORTHO05D008128 2.1e-46 189.5 166 56.6
Sc15g0001550 Simmondsia chinensis HOM05D002419 ORTHO05D008128 2.1e-46 189.5 164 58.5
CsaV3_6G021630 Cucumis sativus L. HOM05D002419 ORTHO05D008128 6.1e-46 188.0 160 57.5
Aqoxy6G01314 Aquilegia oxysepala HOM05D002419 ORTHO05D008128 1.4e-45 186.8 134 61.9
TWI75G1733 Tripterygium wilfordii HOM05D002419 ORTHO05D008128 1.4e-45 186.8 148 60.8
Actinidia03711 Actinidia chinensis HOM05D002419 ORTHO05D008128 2.3e-45 186.0 166 55.4
Gorai.001G129900 Gossypium raimondii HOM05D002419 ORTHO05D008128 5.2e-45 184.9 147 59.2
Rhsim01G0213200 Rhododendron simsii HOM05D002419 ORTHO05D008128 2.0e-44 183.0 132 66.7
Dinv29347 Davidia involucrata HOM05D002419 ORTHO05D008128 4.4e-44 181.8 142 62.0
Lj2A1017T34 Lonicera japonica HOM05D002419 ORTHO05D008128 5.7e-44 181.4 147 57.8
Aqoxy2G01471 Aquilegia oxysepala HOM05D002419 ORTHO05D008128 9.8e-44 180.6 134 57.5
MBI04_g27072_MAGBIO Magnolia biondii HOM05D002419 ORTHO05D008128 9.8e-44 180.6 139 63.3
AT5G60335 Arabidopsis thaliana HOM05D002419 ORTHO05D008128 1.7e-43 179.9 151 57.6
Gohir.A07G116300 Gossypium hirsutum HOM05D002419 ORTHO05D008128 1.7e-43 179.9 146 56.8
Rhsim01G0213400 Rhododendron simsii HOM05D002419 ORTHO05D008128 2.8e-43 179.1 132 65.9
TAR636G2038 Trochodendron aralioides HOM05D002419 ORTHO05D008128 2.8e-43 179.1 167 52.7
Gohir.D07G120700 Gossypium hirsutum HOM05D002419 ORTHO05D008128 3.7e-43 178.7 146 57.5
Carub.0008s2104 Capsella rubella HOM05D002419 ORTHO05D008128 4.8e-43 178.3 143 58.0
PGR102G0399 Punica granatum HOM05D002419 ORTHO05D008128 6.3e-43 177.9 147 60.5
TAR636G3373 Trochodendron aralioides HOM05D002419 ORTHO05D008128 1.4e-42 176.8 167 51.5
Nitab4.5_0000106g0340 Nicotiana tabacum HOM05D002419 ORTHO05D008128 2.4e-42 176.0 162 53.7
AL8G36950 Arabidopsis lyrata HOM05D002419 ORTHO05D008128 4.1e-42 175.3 146 57.5
DCAR_006043 Daucus carota HOM05D002419 ORTHO05D008128 4.1e-42 175.3 153 56.2
CARHR274000 Cardamine hirsuta HOM05D002419 ORTHO05D008128 9.1e-42 174.1 169 54.4
ATR0680G185 Amborella trichopoda HOM05D002419 ORTHO05D008128 1.2e-41 173.7 132 61.4
PGSC0003DMG400012002 Solanum tuberosum HOM05D002419 ORTHO05D008128 1.6e-41 173.3 165 53.9
A03p11220 Brassica napus HOM05D002419 ORTHO05D008128 2.0e-41 172.9 152 57.9
BolC3t13754H Brassica oleracea HOM05D002419 ORTHO05D005441 2.0e-41 172.9 134 59.7
Thhalv10014838m.g Eutrema salsugineum HOM05D002419 ORTHO05D008128 2.0e-41 172.9 149 55.7
Peaxi162Scf00029g01714 Petunia axillaris HOM05D002419 ORTHO05D008128 2.0e-41 172.9 140 57.9
Sopen06g031430 Solanum pennellii HOM05D002419 ORTHO05D008128 2.0e-41 172.9 135 60.7
ClCG02G020940 Citrullus lanatus HOM05D002419 ORTHO05D008128 2.7e-41 172.6 136 61.8
Lsat_1_v5_gn_1_63680 Lactuca sativa HOM05D002419 ORTHO05D008128 2.7e-41 172.6 136 59.6
BcaC04g19693 Brassica carinata HOM05D002419 ORTHO05D008128 4.5e-41 171.8 143 58.0
BraA03t10435Z Brassica rapa HOM05D002419 ORTHO05D008128 4.5e-41 171.8 148 58.8
HanXRQChr01g0019131 Helianthus annuus HOM05D002419 ORTHO05D008128 4.5e-41 171.8 136 58.1
CAN.G2109.1 Capsicum annuum HOM05D002419 ORTHO05D008128 5.9e-41 171.4 135 59.3
ECA248G1487 Erigeron canadensis HOM05D002419 ORTHO05D008128 5.9e-41 171.4 152 52.6
BolC9t58170H Brassica oleracea HOM05D002419 ORTHO05D005441 7.7e-41 171.0 143 58.0
Solyc06g075000.3 Solanum lycopersicum HOM05D002419 ORTHO05D008128 7.7e-41 171.0 135 60.0
A10p17550 Brassica napus HOM05D002419 ORTHO05D005441 1.0e-40 170.6 143 58.0
C09p52960 Brassica napus HOM05D002419 ORTHO05D005441 1.3e-40 170.2 147 57.1
BcaB08g36333 Brassica carinata HOM05D002419 ORTHO05D008128 2.3e-40 169.5 143 57.3
BraA10t43836Z Brassica rapa HOM05D002419 ORTHO05D005441 2.3e-40 169.5 132 59.8
CANSAT54G1052 Cannabis sativa HOM05D002419 ORTHO05D008128 2.3e-40 169.5 150 52.7
Sp6g21940 Schrenkiella parvula HOM05D002419 ORTHO05D008128 2.9e-40 169.1 143 58.7
THA.LOC104814842 Tarenaya hassleriana HOM05D002419 ORTHO05D008128 3.8e-40 168.7 163 54.0
TAR633G0359 Trochodendron aralioides HOM05D002419 ORTHO05D008128 5.0e-40 168.3 151 51.7
PSO339G2915 Papaver somniferum HOM05D002419 ORTHO05D008128 6.6e-40 167.9 130 60.0
Oeu049265.1 Olea europaea HOM05D002419 ORTHO05D008128 1.1e-39 167.2 144 55.6
PSO801G0184 Papaver somniferum HOM05D002419 ORTHO05D008128 1.5e-39 166.8 130 60.0
EL10Ac8g19852 Beta vulgaris HOM05D002419 ORTHO05D008128 3.3e-39 165.6 134 56.7
Oeu009377.1 Olea europaea HOM05D002419 ORTHO05D008128 4.2e-39 165.2 144 55.6
Cc01_g10710 Coffea canephora HOM05D002419 ORTHO05D008128 5.5e-39 164.9 130 61.5
AUR62027574 Chenopodium quinoa HOM05D002419 ORTHO05D008128 1.2e-38 163.7 163 52.1
Hund27375 Selenicereus undatus HOM05D002419 ORTHO05D008128 1.6e-38 163.3 148 56.1
Aa31LG1G12400 Aethionema arabicum HOM05D002419 ORTHO05D005441 2.8e-38 162.5 147 55.8
SEGI_36576 Sequoiadendron giganteum HOM05D002419 ORTHO05D008128 1.0e-37 160.6 144 56.2
CDE09G0261 Ceratophyllum demersum HOM05D007330 ORTHO05D008128 3.4e-36 155.6 135 51.1
SalBow7G0817 Salvia bowleyana HOM05D002419 ORTHO05D008128 3.4e-36 155.6 149 45.6
Eucgr.B02468 Eucalyptus grandis HOM05D002419 ORTHO05D008128 4.9e-35 151.8 166 46.4
SHI33804 Sapria himalayana HOM05D002419 ORTHO05D008128 8.3e-35 151.0 133 54.9
Migut.N02582 Erythranthe guttata HOM05D002419 ORTHO05D008128 7.0e-34 147.9 135 51.1
HPP92_005092 Vanilla planifolia HOM05D002419 ORTHO05D008128 1.6e-33 146.7 138 53.6
Oeu049264.1 Olea europaea HOM05D002419 ORTHO05D008128 2.0e-33 146.4 137 52.6
Nitab4.5_0000511g0130 Nicotiana tabacum HOM05D002419 ORTHO05D008128 5.9e-33 144.8 111 61.3
Lj2A891T18 Lonicera japonica HOM05D002419 ORTHO05D008128 3.9e-32 142.1 131 51.9
Ah.01g024490 Amaranthus hybridus HOM05D002419 ORTHO05D008128 5.0e-32 141.7 107 63.6
FAN11G3570 Fragaria x ananassa HOM05D002273 ORTHO05D008128 8.6e-32 141.0 149 52.3
Zm00001eb211510 Zea mays HOM05D002419 ORTHO05D008128 1.5e-31 140.2 144 51.4
FvH4_3g33270 Fragaria vesca HOM05D002273 ORTHO05D008128 1.9e-31 139.8 149 53.0
unitig_699.g19262 Utricularia gibba HOM05D001486 ORTHO05D003845 5.6e-31 138.3 128 52.3
FAN21G3525 Fragaria x ananassa HOM05D002419 ORTHO05D008128 2.1e-30 136.3 118 59.3
SGA_v2.0_scaffold25G11093 Striga asiatica HOM05D002419 ORTHO05D008128 6.1e-30 134.8 137 48.2
Pp3c27_1710 Physcomitrium patens HOM05D002419 ORTHO05D008128 2.6e-28 129.4 131 48.1
CBR_g17117 Chara braunii HOM05D002419 ORTHO05D008128 7.5e-28 127.9 130 45.4
MSTRG.17782 Avicennia marina HOM05D002419 ORTHO05D008128 9.8e-28 127.5 105 56.2
Mapoly0013s0067 Marchantia polymorpha HOM05D002419 ORTHO05D008128 8.3e-27 124.4 144 44.4
SMO356G0194 Selaginella moellendorffii HOM05D002419 ORTHO05D008128 3.2e-26 122.5 135 45.2
Zm00001eb088630 Zea mays HOM05D002419 ORTHO05D008128 4.6e-25 118.6 104 55.8
AUR62035785 Chenopodium quinoa HOM05D002419 ORTHO05D008128 4.7e-22 108.6 76 65.8
Sed0027804 Sechium edule HOM05D002419 ORTHO05D008128 5.8e-20 101.7 158 38.6
AagrBONN_evm.TU.Sc2ySwM_228.5883 Anthoceros agrestis HOM05D002419 ORTHO05D008128 1.1e-18 97.4 166 34.3
MELO3C025746.2 Cucumis melo HOM05D002419 ORTHO05D008128 1.2e-17 94.0 96 53.1
AagrBONN_evm.TU.Sc2ySwM_228.5888 Anthoceros agrestis HOM05D002419 ORTHO05D008128 3.5e-17 92.4 129 38.0
PRCOL_00002156 Prasinoderma coloniale HOM05D002419 ORTHO05D008128 2.3e-16 89.7 135 34.8
CARHR181070 Cardamine hirsuta HOM05D002419 ORTHO05D008128 3.9e-16 89.0 63 65.1
BcaB01g04653 Brassica carinata HOM05D002419 ORTHO05D008128 2.5e-15 86.3 76 55.3
BcaB01g04652 Brassica carinata HOM05D000125 ORTHO05D008128 1.2e-14 84.0 68 58.8
MCO16G180 Micromonas commoda HOM05D002419 ORTHO05D008128 2.3e-13 79.7 76 51.3
Cre12.g560100 Chlamydomonas reinhardtii HOM05D002419 ORTHO05D008128 3.1e-13 79.3 70 52.9
MD11G1130200 Malus domestica HOM05D005177 ORTHO05D008128 1.7e-11 73.6 77 48.1
Actinidia20438 Actinidia chinensis HOM05D002419 ORTHO05D008128 6.4e-11 71.6 55 61.8
Ciclev10029934m.g Citrus clementina HOM05D002419 ORTHO05D008128 2.7e-09 66.2 41 65.9
Medtr5g087980 Medicago truncatula HOM05D000678 ORTHO05D002523 7.3e-07 58.2 86 40.7


User provided reference genes

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