Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.008G205200 Phaseolus vulgaris HOM05D007737 ORTHO05D009754 1.0e-70 270.0 140 100.0
Glyma.02G276300 Glycine max HOM05D007737 ORTHO05D009754 1.1e-59 233.4 140 88.6
LjContig00564g0006359 Lotus japonicus HOM05D007737 ORTHO05D009754 6.0e-55 217.6 140 82.9
Lalb_Chr17g0347681 Lupinus albus HOM05D007737 ORTHO05D009754 1.2e-52 209.9 140 80.0
arahy.Tifrunner.gnm1.ann1.BW18VB Arachis hypogaea HOM05D007737 ORTHO05D009754 4.7e-52 208.0 142 79.6
arahy.Tifrunner.gnm1.ann1.HH45UC Arachis hypogaea HOM05D007737 ORTHO05D009754 9.9e-50 200.3 140 76.4
arahy.Tifrunner.gnm1.ann1.J0MG2W Arachis hypogaea HOM05D007737 ORTHO05D009754 3.0e-46 188.7 140 66.4
arahy.Tifrunner.gnm1.ann1.4BAK6K Arachis hypogaea HOM05D004879 ORTHO05D009754 3.8e-41 171.8 102 77.5
Dinv43570 Davidia involucrata HOM05D007737 ORTHO05D009754 1.1e-40 170.2 134 68.7
Psat0s2829g0120 Pisum sativum HOM05D007737 ORTHO05D009754 4.2e-40 168.3 137 68.6
Sed0019089 Sechium edule HOM05D007737 ORTHO05D009754 1.2e-39 166.8 127 69.3
Psat0s4349g0040 Pisum sativum HOM05D007737 ORTHO05D009754 2.7e-39 165.6 137 68.6
CiPaw.13G019700 Carya illinoinensis HOM05D007737 ORTHO05D009754 3.0e-38 162.2 138 66.7
CSS0024286 Camellia sinensis var. sinensis HOM05D007737 ORTHO05D009754 3.9e-38 161.8 136 66.9
Psat0s4932g0040 Pisum sativum HOM05D007737 ORTHO05D009754 1.9e-37 159.5 137 69.3
QL04p025132 Quercus lobata HOM05D007737 ORTHO05D009754 1.9e-37 159.5 137 66.4
CsaV3_6G006540 Cucumis sativus L. HOM05D007737 ORTHO05D009754 2.5e-37 159.1 127 67.7
Thecc.10G000900 Theobroma cacao HOM05D007737 ORTHO05D009754 2.5e-37 159.1 132 68.2
MD02G1228500 Malus domestica HOM05D007737 ORTHO05D009754 2.1e-36 156.0 140 64.3
Oeu029042.1 Olea europaea HOM05D007737 ORTHO05D009754 3.6e-36 155.2 137 54.7
ECA236G0282 Erigeron canadensis HOM05D007737 ORTHO05D009754 2.4e-35 152.5 135 63.7
RcHm_v2.0_Chr0c20g0500251 Rosa chinensis HOM05D007737 ORTHO05D009754 5.3e-35 151.4 132 54.5
Gohir.A05G333700 Gossypium hirsutum HOM05D007737 ORTHO05D009754 3.4e-34 148.7 113 61.9
Gohir.D04G072800 Gossypium hirsutum HOM05D007737 ORTHO05D009754 5.8e-34 147.9 134 55.2
Duzib128G0131 Durio zibethinus HOM05D007737 ORTHO05D009754 7.6e-34 147.5 135 62.2
Gorai.012G081800 Gossypium raimondii HOM05D007737 ORTHO05D009754 1.3e-33 146.7 113 61.9
Hma1.2p1_0601F.1_g187210 Hydrangea macrophylla HOM05D007737 ORTHO05D009754 1.3e-33 146.7 135 54.8
Cc02_g25850 Coffea canephora HOM05D007737 ORTHO05D009754 1.4e-32 143.3 137 55.5
Medtr5g088570 Medicago truncatula HOM05D004879 ORTHO05D008271 2.4e-32 142.5 93 74.2
Eucgr.D01138 Eucalyptus grandis HOM05D007737 ORTHO05D009754 3.2e-32 142.1 114 71.1
Manes.12G126400 Manihot esculenta HOM05D007737 ORTHO05D009754 3.2e-32 142.1 112 59.8
PGSC0003DMG400015652 Solanum tuberosum HOM05D007737 ORTHO05D009754 4.2e-32 141.7 121 56.2
CANSAT35G0994 Cannabis sativa HOM05D007737 ORTHO05D009754 7.1e-32 141.0 133 51.9
FvH4_7g08430 Fragaria vesca HOM05D007737 ORTHO05D009754 2.7e-31 139.0 128 62.5
Solyc06g051160.4 Solanum lycopersicum HOM05D007737 ORTHO05D009754 3.5e-31 138.7 131 52.7
Lsat_1_v5_gn_7_11721 Lactuca sativa HOM05D007737 ORTHO05D009754 4.6e-31 138.3 147 50.3
Actinidia05801 Actinidia chinensis HOM05D007737 ORTHO05D009754 1.0e-30 137.1 117 54.7
Ciclev10022762m.g Citrus clementina HOM05D007737 ORTHO05D009754 2.3e-30 136.0 129 59.7
FAN03G2224 Fragaria x ananassa HOM05D007737 ORTHO05D009754 3.9e-30 135.2 128 61.7
Sabra14G0139900 Salix brachista HOM05D007737 ORTHO05D009754 3.9e-30 135.2 110 57.3
CAN.G1183.16 Capsicum annuum HOM05D007737 ORTHO05D009754 6.7e-30 134.4 132 59.8
MSTRG.4970 Avicennia marina HOM05D007737 ORTHO05D009754 1.5e-29 133.3 135 49.6
PGR119G2515 Punica granatum HOM05D007737 ORTHO05D009754 1.5e-29 133.3 125 56.8
Actinidia30967 Actinidia chinensis HOM05D007737 ORTHO05D009754 1.9e-29 132.9 128 49.2
GSVIVG01018401001 Vitis vinifera HOM05D007737 ORTHO05D009754 2.5e-29 132.5 139 59.0
COL.COLO4_19346 Corchorus olitorius HOM05D007737 ORTHO05D009754 5.6e-29 131.3 136 51.5
HanXRQChr06g0168511 Helianthus annuus HOM05D007737 ORTHO05D009754 5.6e-29 131.3 106 55.7
TAR375G1083 Trochodendron aralioides HOM05D007737 ORTHO05D009754 1.6e-28 129.8 129 48.1
FAN10G0020 Fragaria x ananassa HOM05D007737 ORTHO05D009754 2.1e-28 129.4 120 61.7
Migut.N01704 Erythranthe guttata HOM05D007737 ORTHO05D009754 2.8e-28 129.0 105 55.2
Sc02g0003320 Simmondsia chinensis HOM05D007737 ORTHO05D009754 2.8e-28 129.0 117 61.5
DCAR_029388 Daucus carota HOM05D007737 ORTHO05D009754 1.2e-26 123.6 135 44.4
Nitab4.5_0011440g0030 Nicotiana tabacum HOM05D007737 ORTHO05D009754 2.6e-26 122.5 108 54.6
SalBow4G2387 Salvia bowleyana HOM05D007737 ORTHO05D009754 1.7e-25 119.8 162 41.4
AUR62023349 Chenopodium quinoa HOM05D007737 ORTHO05D009754 1.4e-24 116.7 109 64.2
TWI23G0770 Tripterygium wilfordii HOM05D007737 ORTHO05D009754 1.9e-24 116.3 135 44.4
Potri.014G179800 Populus trichocarpa HOM05D007737 ORTHO05D009754 2.4e-24 115.9 100 63.0
Atru.chr5.19 Acer truncatum HOM05D007737 ORTHO05D009754 9.3e-24 114.0 95 68.4
AUR62013808 Chenopodium quinoa HOM05D007737 ORTHO05D009754 1.2e-23 113.6 112 62.5
TWI14G0846 Tripterygium wilfordii HOM05D007737 ORTHO05D009754 3.5e-23 112.1 135 43.7
PSO210G3843 Papaver somniferum HOM05D007737 ORTHO05D009754 4.6e-23 111.7 112 58.9
Sopen06g017020 Solanum pennellii HOM05D007737 ORTHO05D009754 4.6e-23 111.7 98 58.2
PSO210G3425 Papaver somniferum HOM05D007737 ORTHO05D009754 7.9e-23 110.9 105 61.9
Os04g0589200 Oryza sativa ssp. japonica HOM05D007737 ORTHO05D009754 1.8e-22 109.8 93 62.4
ClCG06G000750 Citrullus lanatus HOM05D007737 ORTHO05D009754 5.1e-22 108.2 68 67.6
Mapoly0099s0043 Marchantia polymorpha HOM05D007737 ORTHO05D009754 6.7e-22 107.8 99 64.6
AL3G30770 Arabidopsis lyrata HOM05D007737 ORTHO05D009754 1.5e-21 106.7 112 55.4
Carub.0003s1738 Capsella rubella HOM05D007737 ORTHO05D009754 2.5e-21 105.9 112 53.6
SGA_v2.0_scaffold77G25232 Striga asiatica HOM05D007737 ORTHO05D009754 7.4e-21 104.4 95 51.6
Sp3g15800 Schrenkiella parvula HOM05D007737 ORTHO05D009754 9.6e-21 104.0 127 50.4
BraA01t03730Z Brassica rapa HOM05D007737 ORTHO05D009754 1.3e-20 103.6 112 51.8
THA.LOC104806480 Tarenaya hassleriana HOM05D007737 ORTHO05D009754 1.3e-20 103.6 126 49.2
AT3G17668 Arabidopsis thaliana HOM05D007737 ORTHO05D009754 4.8e-20 101.7 112 53.6
Thhalv10021734m.g Eutrema salsugineum HOM05D007737 ORTHO05D009754 8.1e-20 100.9 112 53.6
Prupe.2G111200 Prunus persica HOM05D007737 ORTHO05D009754 1.1e-19 100.5 103 59.2
CARHR093000 Cardamine hirsuta HOM05D007737 ORTHO05D009754 2.4e-19 99.4 113 54.0
C01p46550 Brassica napus HOM05D007737 ORTHO05D009754 3.1e-19 99.0 112 50.9
BcaC09g48726 Brassica carinata HOM05D001802 ORTHO05D001788 5.3e-19 98.2 112 50.9
Nitab4.5_0000507g0110 Nicotiana tabacum HOM05D007737 ORTHO05D009754 3.4e-18 95.5 78 56.4
BcaB04g20827 Brassica carinata HOM05D001802 ORTHO05D001788 1.3e-17 93.6 112 51.8
unitig_22.g5837 Utricularia gibba HOM05D007737 ORTHO05D009754 2.2e-17 92.8 83 69.9
FAN06G2876 Fragaria x ananassa HOM05D007737 ORTHO05D009754 1.1e-16 90.5 70 58.6
Aa31LG8G4530 Aethionema arabicum HOM05D007345 ORTHO05D009277 4.2e-16 88.6 103 40.8
HPP92_007265 Vanilla planifolia HOM05D007737 ORTHO05D009754 1.6e-15 86.7 99 53.5
Pp3c17_5190 Physcomitrium patens HOM05D007737 ORTHO05D009754 6.0e-15 84.7 97 56.7
AagrBONN_evm.TU.Sc2ySwM_344.418 Anthoceros agrestis HOM05D007737 ORTHO05D009754 5.1e-14 81.6 89 41.6
Pp3c8_23020 Physcomitrium patens HOM05D007737 ORTHO05D009754 5.1e-14 81.6 97 54.6
Aqoxy3G02490 Aquilegia oxysepala HOM05D007737 ORTHO05D009754 4.5e-10 68.6 91 50.5
MELO3C022466.2 Cucumis melo HOM05D007737 ORTHO05D009754 7.6e-10 67.8 127 34.6
vmacro13551 Vaccinium macrocarpon HOM05D007737 ORTHO05D009754 8.5e-09 64.3 177 28.8
HPP92_007269 Vanilla planifolia HOM05D007737 ORTHO05D009754 1.1e-08 63.9 42 59.5


User provided reference genes

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