Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.008G202800 Phaseolus vulgaris HOM05D000737 ORTHO05D307821 4.3e-33 144.1 72 100.0
VMungo1080G0088 Vigna mungo HOM05D000737 ORTHO05D000581 5.7e-09 63.9 37 81.1
CiPaw.13G143200 Carya illinoinensis HOM05D000737 ORTHO05D000581 1.3e-08 62.8 37 75.7
Glyma.12G179600 Glycine max HOM05D000737 ORTHO05D000581 1.7e-08 62.4 37 78.4
Manes.04G011700 Manihot esculenta HOM05D000737 ORTHO05D000581 2.2e-08 62.0 37 75.7
Nn6g35159 Nelumbo nucifera HOM05D000737 ORTHO05D000581 2.2e-08 62.0 37 75.7
arahy.Tifrunner.gnm1.ann1.K2M25G Arachis hypogaea HOM05D000737 ORTHO05D000581 3.7e-08 61.2 37 78.4
CSS0013799 Camellia sinensis var. sinensis HOM05D000737 ORTHO05D000581 3.7e-08 61.2 37 75.7
Eucgr.J00403 Eucalyptus grandis HOM05D000737 ORTHO05D000581 3.7e-08 61.2 37 70.3
Potri.001G213200 Populus trichocarpa HOM05D000737 ORTHO05D000581 3.7e-08 61.2 37 75.7
Potri.001G213400 Populus trichocarpa HOM05D000737 ORTHO05D000581 3.7e-08 61.2 37 75.7
MELO3C021475.2 Cucumis melo HOM05D000737 ORTHO05D000581 4.8e-08 60.8 37 73.0
CsaV3_6G014500 Cucumis sativus L. HOM05D000737 ORTHO05D000581 4.8e-08 60.8 37 73.0
Manes.11G154400 Manihot esculenta HOM05D000737 ORTHO05D000581 4.8e-08 60.8 37 73.0
Nn2g12630 Nelumbo nucifera HOM05D000737 ORTHO05D000581 4.8e-08 60.8 37 73.0
Cfa010122 Carpinus fangiana HOM05D000737 ORTHO05D000581 6.3e-08 60.5 37 75.7
DCAR_017782 Daucus carota HOM05D000737 ORTHO05D000581 6.3e-08 60.5 37 75.7
HanXRQChr01g0017961 Helianthus annuus HOM05D000737 ORTHO05D000581 6.3e-08 60.5 37 73.0
Potri.001G212900 Populus trichocarpa HOM05D000737 ORTHO05D000581 6.3e-08 60.5 37 70.3
Potri.001G213000 Populus trichocarpa HOM05D000737 ORTHO05D000581 6.3e-08 60.5 37 70.3
QL01p014544 Quercus lobata HOM05D000737 ORTHO05D000581 6.3e-08 60.5 37 75.7
Rhsim12G0167100 Rhododendron simsii HOM05D000737 ORTHO05D000581 6.3e-08 60.5 37 70.3
GSVIVG01005022001 Vitis vinifera HOM05D000737 ORTHO05D000581 6.3e-08 60.5 37 73.0
Cfa010126 Carpinus fangiana HOM05D000737 ORTHO05D000581 8.2e-08 60.1 37 75.7
Eucgr.J00400 Eucalyptus grandis HOM05D000737 ORTHO05D000581 8.2e-08 60.1 37 67.6
Nn2g11996 Nelumbo nucifera HOM05D000737 ORTHO05D000581 8.2e-08 60.1 37 75.7
vmacro17468 Vaccinium macrocarpon HOM05D000737 ORTHO05D000581 8.2e-08 60.1 37 73.0
Atru.chr3.3449_Atru.chr3.3453_Atru.chr3.3455 Acer truncatum HOM05D000737 ORTHO05D000581 1.1e-07 59.7 37 73.0
arahy.Tifrunner.gnm1.ann1.BT3P13 Arachis hypogaea HOM05D000737 ORTHO05D000581 1.1e-07 59.7 37 75.7
arahy.Tifrunner.gnm1.ann1.MX4KCR Arachis hypogaea HOM05D000737 ORTHO05D000581 1.1e-07 59.7 37 75.7
ClCG02G021730 Citrullus lanatus HOM05D000737 ORTHO05D000581 1.1e-07 59.7 37 70.3
Ciclev10028252m.g Citrus clementina HOM05D000737 ORTHO05D000581 1.1e-07 59.7 37 75.7
SGA_v2.0_scaffold83G26436 Striga asiatica HOM05D000737 ORTHO05D000581 1.1e-07 59.7 37 73.0
arahy.Tifrunner.gnm1.ann1.ZFQ2FP Arachis hypogaea HOM05D000737 ORTHO05D000581 1.4e-07 59.3 37 75.7
CANSAT64G0446 Cannabis sativa HOM05D000737 ORTHO05D000581 1.4e-07 59.3 37 73.0
CANSAT64G2424 Cannabis sativa HOM05D000737 ORTHO05D000581 1.4e-07 59.3 37 73.0
Hma1.2p1_0051F.1_g029660 Hydrangea macrophylla HOM05D000737 ORTHO05D000581 1.4e-07 59.3 37 73.0
Lj2A1001T47 Lonicera japonica HOM05D000737 ORTHO05D000581 1.4e-07 59.3 37 73.0
Lj2C999T6 Lonicera japonica HOM05D000737 ORTHO05D000581 1.4e-07 59.3 37 73.0
Nitab4.5_0000442g0040 Nicotiana tabacum HOM05D000737 ORTHO05D000581 1.4e-07 59.3 37 73.0
GSVIVG01031435001 Vitis vinifera HOM05D000737 ORTHO05D000581 1.4e-07 59.3 37 73.0
GSVIVG01031436001 Vitis vinifera HOM05D000737 ORTHO05D000581 1.4e-07 59.3 37 73.0
Actinidia24161 Actinidia chinensis HOM05D000737 ORTHO05D000581 1.8e-07 58.9 37 73.0
CiPaw.13G143300 Carya illinoinensis HOM05D000737 ORTHO05D000581 1.8e-07 58.9 37 75.7
CiPaw.13G143500 Carya illinoinensis HOM05D000737 ORTHO05D000581 1.8e-07 58.9 37 75.7
Ciclev10028519m.g Citrus clementina HOM05D000737 ORTHO05D000581 1.8e-07 58.9 37 73.0
Eucgr.J00402 Eucalyptus grandis HOM05D000737 ORTHO05D000581 1.8e-07 58.9 37 64.9
Lj3g0023665 Lotus japonicus HOM05D000737 ORTHO05D000581 1.8e-07 58.9 37 70.3
Medtr2g084535 Medicago truncatula HOM05D000737 ORTHO05D000581 1.8e-07 58.9 37 70.3
QL03p064693 Quercus lobata HOM05D000737 ORTHO05D000581 1.8e-07 58.9 37 73.0
Solyc11g066590.2 Solanum lycopersicum HOM05D000737 ORTHO05D000581 1.8e-07 58.9 37 73.0
Solyc11g066600.2 Solanum lycopersicum HOM05D000737 ORTHO05D000581 1.8e-07 58.9 37 73.0
Sopen11g026320 Solanum pennellii HOM05D000737 ORTHO05D000581 1.8e-07 58.9 37 73.0
Sopen11g026330 Solanum pennellii HOM05D000737 ORTHO05D000581 1.8e-07 58.9 37 73.0
MSTRG.17747 Avicennia marina HOM05D000737 ORTHO05D000581 2.4e-07 58.5 37 73.0
CAN.G439.3 Capsicum annuum HOM05D000737 ORTHO05D000581 2.4e-07 58.5 37 73.0
ECA248G3481 Erigeron canadensis HOM05D000737 ORTHO05D000581 2.4e-07 58.5 37 73.0
Nitab4.5_0000442g0010 Nicotiana tabacum HOM05D000737 ORTHO05D000581 2.4e-07 58.5 37 70.3
QL01p014523 Quercus lobata HOM05D000737 ORTHO05D000581 2.4e-07 58.5 37 70.3
QL03p064669 Quercus lobata HOM05D000737 ORTHO05D000581 2.4e-07 58.5 37 70.3
Actinidia24159 Actinidia chinensis HOM05D000737 ORTHO05D000581 3.1e-07 58.2 37 70.3
CSS0030400 Camellia sinensis var. sinensis HOM05D000737 ORTHO05D000581 3.1e-07 58.2 37 73.0
CSS0032643 Camellia sinensis var. sinensis HOM05D000737 ORTHO05D000581 3.1e-07 58.2 37 70.3
CsaV3_1G014340 Cucumis sativus L. HOM05D000737 ORTHO05D000581 3.1e-07 58.2 37 73.0
CsaV3_4G021990 Cucumis sativus L. HOM05D000737 ORTHO05D000581 3.1e-07 58.2 37 73.0
Lj3g0007547 Lotus japonicus HOM05D000737 ORTHO05D000581 3.1e-07 58.2 37 73.0
Oeu035523.1 Olea europaea HOM05D000737 ORTHO05D000581 3.1e-07 58.2 37 73.0
Phvul.003G038000 Phaseolus vulgaris HOM05D000737 ORTHO05D000581 3.1e-07 58.2 37 70.3
Potri.001G213500 Populus trichocarpa HOM05D000737 ORTHO05D000581 3.1e-07 58.2 37 70.3
TAR633G0694 Trochodendron aralioides HOM05D000737 ORTHO05D000581 3.1e-07 58.2 37 70.3
TAR633G1185 Trochodendron aralioides HOM05D000737 ORTHO05D000581 3.1e-07 58.2 37 70.3
VMungo1215G2623 Vigna mungo HOM05D000737 ORTHO05D000581 3.1e-07 58.2 37 70.3
Atru.chr12.924 Acer truncatum HOM05D000737 ORTHO05D000581 4.1e-07 57.8 37 64.9
CiPaw.13G143400 Carya illinoinensis HOM05D000737 ORTHO05D000581 4.1e-07 57.8 37 73.0
CiPaw.13G143700 Carya illinoinensis HOM05D000737 ORTHO05D000581 4.1e-07 57.8 37 75.7
MELO3C004835.2 Cucumis melo HOM05D000737 ORTHO05D000581 4.1e-07 57.8 37 70.3
Nn2g13912 Nelumbo nucifera HOM05D000737 ORTHO05D000581 4.1e-07 57.8 37 70.3
Oeu008368.2 Olea europaea HOM05D000737 ORTHO05D000581 4.1e-07 57.8 37 70.3
Potri.001G213300 Populus trichocarpa HOM05D000737 ORTHO05D000581 4.1e-07 57.8 37 70.3
Sabra09G0001000 Salix brachista HOM05D000737 ORTHO05D000581 4.1e-07 57.8 37 70.3
unitig_22.g5655 Utricularia gibba HOM05D000737 ORTHO05D000581 4.1e-07 57.8 37 64.9
Dinv12562 Davidia involucrata HOM05D000737 ORTHO05D000581 5.3e-07 57.4 37 70.3
Migut.N02532 Erythranthe guttata HOM05D000737 ORTHO05D000581 5.3e-07 57.4 37 70.3
Eucgr.B01187 Eucalyptus grandis HOM05D000737 ORTHO05D000581 5.3e-07 57.4 37 67.6
Eucgr.J00406 Eucalyptus grandis HOM05D000737 ORTHO05D000581 5.3e-07 57.4 37 67.6
Eucgr.J00408 Eucalyptus grandis HOM05D000737 ORTHO05D000581 5.3e-07 57.4 37 67.6
Lj3g0014464 Lotus japonicus HOM05D000737 ORTHO05D000581 5.3e-07 57.4 37 70.3
TPR.G32373 Trifolium pratense HOM05D000737 ORTHO05D000581 5.3e-07 57.4 37 70.3
vmacro03241 Vaccinium macrocarpon HOM05D000737 ORTHO05D000581 5.3e-07 57.4 37 67.6
vmacro03243 Vaccinium macrocarpon HOM05D000737 ORTHO05D000581 5.3e-07 57.4 37 67.6
Ciclev10030040m.g Citrus clementina HOM05D000737 ORTHO05D000581 6.9e-07 57.0 37 73.0
Cc01_g04320 Coffea canephora HOM05D000737 ORTHO05D000581 6.9e-07 57.0 37 67.6
Lsat_1_v5_gn_1_61561 Lactuca sativa HOM05D000737 ORTHO05D000581 6.9e-07 57.0 37 67.6
Oeu000607.1 Olea europaea HOM05D000737 ORTHO05D000581 6.9e-07 57.0 37 70.3
Oeu000612.1 Olea europaea HOM05D000737 ORTHO05D000581 6.9e-07 57.0 37 70.3
Oeu000613.1 Olea europaea HOM05D000737 ORTHO05D000581 6.9e-07 57.0 37 70.3
SalBow3G1721 Salvia bowleyana HOM05D000737 ORTHO05D000581 6.9e-07 57.0 37 70.3
vmacro03240 Vaccinium macrocarpon HOM05D000737 ORTHO05D000581 6.9e-07 57.0 37 67.6
Cfa010119 Carpinus fangiana HOM05D000737 ORTHO05D000581 9.1e-07 56.6 37 67.6
Peaxi162Scf00150g00316 Petunia axillaris HOM05D000737 ORTHO05D000581 9.1e-07 56.6 37 67.6
Psat5g234880 Pisum sativum HOM05D000737 ORTHO05D000581 9.1e-07 56.6 37 64.9
Potri.009G002200 Populus trichocarpa HOM05D000737 ORTHO05D000581 9.1e-07 56.6 37 67.6
Rhsim13G0102600 Rhododendron simsii HOM05D000737 ORTHO05D000581 9.1e-07 56.6 37 67.6
TWI63G0598 Tripterygium wilfordii HOM05D000737 ORTHO05D000581 9.1e-07 56.6 37 64.9
TWI75G1260 Tripterygium wilfordii HOM05D000737 ORTHO05D000581 9.1e-07 56.6 37 67.6
CAN.G546.71 Capsicum annuum HOM05D000737 ORTHO05D000581 1.2e-06 56.2 37 70.3
Nn6g35158 Nelumbo nucifera HOM05D000737 ORTHO05D000581 1.2e-06 56.2 37 67.6
Phvul.005G129500 Phaseolus vulgaris HOM05D000737 ORTHO05D000581 1.2e-06 56.2 37 70.3
Rhsim13G0102700 Rhododendron simsii HOM05D000737 ORTHO05D000581 1.2e-06 56.2 37 67.6
Rhsim13G0102800 Rhododendron simsii HOM05D000737 ORTHO05D000581 1.2e-06 56.2 37 64.9
vmacro17467 Vaccinium macrocarpon HOM05D000737 ORTHO05D000581 1.2e-06 56.2 37 67.6
Glyma.01G065400 Glycine max HOM05D000737 ORTHO05D000581 1.5e-06 55.8 37 70.3
Lj1C216T1 Lonicera japonica HOM05D000737 ORTHO05D000581 1.5e-06 55.8 37 67.6
MBI01_g21438_MAGBIO Magnolia biondii HOM05D000737 ORTHO05D000581 1.5e-06 55.8 37 64.9
Manes.04G011600 Manihot esculenta HOM05D000737 ORTHO05D000581 1.5e-06 55.8 37 67.6
Rhsim13G0102500 Rhododendron simsii HOM05D000737 ORTHO05D000581 1.5e-06 55.8 37 64.9
GSVIVG01031440001 Vitis vinifera HOM05D000737 ORTHO05D000581 1.5e-06 55.8 37 67.6
Dinv12563 Davidia involucrata HOM05D000737 ORTHO05D000581 2.0e-06 55.5 37 70.3
Dinv12565 Davidia involucrata HOM05D000737 ORTHO05D000581 2.0e-06 55.5 37 70.3
Eucgr.J00404 Eucalyptus grandis HOM05D000737 ORTHO05D000581 2.0e-06 55.5 37 64.9
Gohir.D09G086800 Gossypium hirsutum HOM05D000737 ORTHO05D000581 2.0e-06 55.5 37 64.9
Gohir.D09G087000 Gossypium hirsutum HOM05D000737 ORTHO05D000581 2.0e-06 55.5 37 64.9
Manes.11G154300 Manihot esculenta HOM05D000737 ORTHO05D000581 2.0e-06 55.5 37 67.6
Nn2g13914 Nelumbo nucifera HOM05D000737 ORTHO05D000581 2.0e-06 55.5 37 67.6
Cfa010118 Carpinus fangiana HOM05D000737 ORTHO05D000581 2.6e-06 55.1 37 64.9
Manes.06G016300 Manihot esculenta HOM05D000737 ORTHO05D000581 2.6e-06 55.1 37 70.3
Manes.14G157500 Manihot esculenta HOM05D000737 ORTHO05D000581 2.6e-06 55.1 37 62.2
Manes.14G157601 Manihot esculenta HOM05D000737 ORTHO05D000581 2.6e-06 55.1 37 62.2
Manes.14G157701 Manihot esculenta HOM05D000737 ORTHO05D000581 2.6e-06 55.1 37 62.2
Manes.14G157801 Manihot esculenta HOM05D000737 ORTHO05D000581 2.6e-06 55.1 37 62.2
Manes.14G160200 Manihot esculenta HOM05D000737 ORTHO05D000581 2.6e-06 55.1 37 62.2
Phvul.005G129200 Phaseolus vulgaris HOM05D000737 ORTHO05D000581 2.6e-06 55.1 37 67.6
Thecc.09G295500 Theobroma cacao HOM05D000737 ORTHO05D000581 2.6e-06 55.1 37 67.6
Aqoxy1G01009 Aquilegia oxysepala HOM05D000737 ORTHO05D000581 3.4e-06 54.7 37 62.2
Aqoxy1G01029 Aquilegia oxysepala HOM05D000737 ORTHO05D000581 3.4e-06 54.7 37 70.3
FvH4_3g30360 Fragaria vesca HOM05D000737 ORTHO05D000581 3.4e-06 54.7 38 71.1
Gorai.006G103400 Gossypium raimondii HOM05D000737 ORTHO05D000581 3.4e-06 54.7 37 64.9
Potri.009G002300 Populus trichocarpa HOM05D000737 ORTHO05D000581 3.4e-06 54.7 37 70.3
Sed0020228 Sechium edule HOM05D000737 ORTHO05D000581 3.4e-06 54.7 37 64.9
CANSAT64G0197 Cannabis sativa HOM05D000737 ORTHO05D000581 4.5e-06 54.3 37 67.6
CANSAT64G1554 Cannabis sativa HOM05D000737 ORTHO05D000581 4.5e-06 54.3 37 67.6
COL.COLO4_19241 Corchorus olitorius HOM05D000737 ORTHO05D000581 4.5e-06 54.3 37 67.6
MELO3C021473.2 Cucumis melo HOM05D000737 ORTHO05D000581 4.5e-06 54.3 37 64.9
CsaV3_6G014520 Cucumis sativus L. HOM05D000737 ORTHO05D000581 4.5e-06 54.3 37 64.9
Eucgr.J00407 Eucalyptus grandis HOM05D000737 ORTHO05D000581 4.5e-06 54.3 37 62.2
Glyma.02G123000 Glycine max HOM05D000737 ORTHO05D000581 4.5e-06 54.3 37 62.2
Gohir.A07G106200 Gossypium hirsutum HOM05D000737 ORTHO05D000581 4.5e-06 54.3 37 59.5
Gorai.001G118300 Gossypium raimondii HOM05D000737 ORTHO05D000581 4.5e-06 54.3 37 59.5
Aqoxy1G01012 Aquilegia oxysepala HOM05D000737 ORTHO05D000581 5.9e-06 53.9 37 62.2
Aqoxy2G01555 Aquilegia oxysepala HOM05D000737 ORTHO05D000581 5.9e-06 53.9 37 64.9
Aqoxy4G02595 Aquilegia oxysepala HOM05D000737 ORTHO05D000581 5.9e-06 53.9 37 64.9
Ciclev10028272m.g Citrus clementina HOM05D000737 ORTHO05D000581 5.9e-06 53.9 37 64.9
CsaV3_6G014510 Cucumis sativus L. HOM05D000737 ORTHO05D000581 5.9e-06 53.9 37 64.9
Lalb_Chr22g0350481 Lupinus albus HOM05D000737 ORTHO05D000581 5.9e-06 53.9 37 67.6
Sed0008877 Sechium edule HOM05D000737 ORTHO05D000581 5.9e-06 53.9 37 62.2
Thecc.09G295300 Theobroma cacao HOM05D000737 ORTHO05D000581 5.9e-06 53.9 37 64.9
Aqoxy1G00737 Aquilegia oxysepala HOM05D000737 ORTHO05D000581 7.7e-06 53.5 37 64.9
Eucgr.J00405 Eucalyptus grandis HOM05D000737 ORTHO05D000581 7.7e-06 53.5 37 62.2
FAN16G2479 Fragaria x ananassa HOM05D000737 ORTHO05D000581 7.7e-06 53.5 38 68.4
FAN21G0291 Fragaria x ananassa HOM05D000737 ORTHO05D000581 7.7e-06 53.5 38 68.4
FAN21G1169 Fragaria x ananassa HOM05D003791 ORTHO05D004961 7.7e-06 53.5 38 68.4
FAN21G3834 Fragaria x ananassa HOM05D000737 ORTHO05D000581 7.7e-06 53.5 38 68.4
Gohir.A09G087300 Gossypium hirsutum HOM05D000737 ORTHO05D000581 7.7e-06 53.5 37 62.2
Gohir.D09G087200 Gossypium hirsutum HOM05D000737 ORTHO05D000581 7.7e-06 53.5 37 62.2
Gorai.006G103600 Gossypium raimondii HOM05D000737 ORTHO05D000581 7.7e-06 53.5 37 62.2
Potri.010G232300 Populus trichocarpa HOM05D000737 ORTHO05D000581 7.7e-06 53.5 37 59.5
QL04p040111 Quercus lobata HOM05D000737 ORTHO05D000581 7.7e-06 53.5 37 64.9
TWI38G0685 Tripterygium wilfordii HOM05D000737 ORTHO05D000581 7.7e-06 53.5 37 59.5


User provided reference genes

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