Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.008G202300 Phaseolus vulgaris HOM05D005152 ORTHO05D006162 0.0e+00 1184.9 634 100.0
VMungo0647G0059 Vigna mungo HOM05D005152 ORTHO05D006162 1.1e-294 1016.1 629 87.8
Glyma.14G036100 Glycine max HOM05D005152 ORTHO05D006162 4.6e-280 967.6 634 84.1
Glyma.02G278500 Glycine max HOM05D005152 ORTHO05D006162 9.0e-268 926.8 638 80.4
LjContig00564g0003451 Lotus japonicus HOM05D005152 ORTHO05D006162 6.3e-245 850.9 633 73.1
Ca_06203_v3 Cicer arietinum L. HOM05D005152 ORTHO05D006162 4.5e-227 791.6 646 66.3
Ca_06206_v3 Cicer arietinum L. HOM05D005152 ORTHO05D006162 4.5e-227 791.6 646 66.3
Lalb_Chr10g0106191 Lupinus albus HOM05D005152 ORTHO05D006162 1.2e-222 776.9 635 67.4
arahy.Tifrunner.gnm1.ann1.3CD1QA Arachis hypogaea HOM05D005152 ORTHO05D006162 2.0e-222 776.2 632 67.4
arahy.Tifrunner.gnm1.ann1.NHHR58 Arachis hypogaea HOM05D005152 ORTHO05D006162 4.9e-221 771.5 647 66.2
Psat2g020920 Pisum sativum HOM05D005152 ORTHO05D006162 1.4e-207 726.9 643 64.2
Medtr5g089190 Medicago truncatula HOM05D005152 ORTHO05D006162 1.3e-189 667.2 651 57.8
TPR.G16391 Trifolium pratense HOM05D005152 ORTHO05D006162 3.2e-188 662.5 637 60.8
QL01p016753 Quercus lobata HOM05D005152 ORTHO05D006162 8.7e-162 574.7 641 52.3
Haze_23256 Corylus avellana HOM05D005152 ORTHO05D006162 3.1e-159 566.2 636 52.8
Ciclev10014592m.g Citrus clementina HOM05D005152 ORTHO05D006162 1.9e-153 547.0 657 50.4
Prupe.4G267500 Prunus persica HOM05D005152 ORTHO05D006162 6.3e-152 542.0 665 50.1
Thecc.03G310200 Theobroma cacao HOM05D005152 ORTHO05D006162 6.5e-149 531.9 646 49.8
Potri.009G067800 Populus trichocarpa HOM05D005152 ORTHO05D006162 5.5e-148 528.9 668 48.7
Potri.001G273600 Populus trichocarpa HOM05D005152 ORTHO05D006162 2.5e-145 520.0 665 48.4
RcHm_v2.0_Chr7g0223811 Rosa chinensis HOM05D005152 ORTHO05D006162 2.5e-145 520.0 664 48.6
FAN13G1175 Fragaria x ananassa HOM05D005152 ORTHO05D006162 3.3e-145 519.6 683 48.5
MD15G1434100 Malus domestica HOM05D005152 ORTHO05D006162 3.3e-145 519.6 670 48.8
FvH4_5g29960 Fragaria vesca HOM05D005152 ORTHO05D006162 5.7e-145 518.8 675 49.2
Hund07432 Selenicereus undatus HOM05D005152 ORTHO05D006162 1.7e-144 517.3 664 47.3
Actinidia24470 Actinidia chinensis HOM05D005152 ORTHO05D006162 2.8e-144 516.5 647 48.5
COL.COLO4_16941 Corchorus olitorius HOM05D005152 ORTHO05D006162 2.8e-144 516.5 650 48.6
Cfa009894 Carpinus fangiana HOM05D005152 ORTHO05D006162 3.1e-143 513.1 664 48.2
Manes.02G136600 Manihot esculenta HOM05D005152 ORTHO05D006162 6.9e-143 511.9 654 48.9
vmacro12803 Vaccinium macrocarpon HOM05D005152 ORTHO05D006162 3.4e-142 509.6 652 47.4
FAN04G0382 Fragaria x ananassa HOM05D005152 ORTHO05D006162 5.9e-142 508.8 667 48.7
FAN08G2618 Fragaria x ananassa HOM05D005152 ORTHO05D006162 2.9e-141 506.5 670 48.8
Gohir.D03G176100 Gossypium hirsutum HOM05D005152 ORTHO05D006162 3.8e-141 506.1 645 46.8
Nn7g36798 Nelumbo nucifera HOM05D005152 ORTHO05D006162 6.5e-141 505.4 660 48.2
Sed0006572 Sechium edule HOM05D005152 ORTHO05D006162 1.4e-140 504.2 656 47.7
Gorai.003G185300 Gossypium raimondii HOM05D005152 ORTHO05D006162 2.5e-140 503.4 645 46.8
Gohir.A03G000034 Gossypium hirsutum HOM05D005152 ORTHO05D006162 6.1e-139 498.8 646 46.0
ClCG02G022750 Citrullus lanatus HOM05D005152 ORTHO05D006162 7.9e-139 498.4 656 47.3
MELO3C014552.2 Cucumis melo HOM05D005152 ORTHO05D006162 1.4e-138 497.7 657 46.4
CsaV3_6G038870 Cucumis sativus L. HOM05D005152 ORTHO05D006162 5.7e-137 492.3 658 46.2
CANSAT11G0534 Cannabis sativa HOM05D005152 ORTHO05D006162 1.4e-135 487.6 647 45.1
Eucgr.J00691 Eucalyptus grandis HOM05D005152 ORTHO05D006162 7.0e-135 485.3 634 45.7
MSTRG.20931 Avicennia marina HOM05D005152 ORTHO05D006162 9.1e-135 485.0 654 45.4
Duzib205G1611 Durio zibethinus HOM05D005152 ORTHO05D006162 1.7e-133 480.7 664 45.5
Lj2C487T6 Lonicera japonica HOM05D005152 ORTHO05D006162 1.1e-132 478.0 656 46.5
EL10Ac4g10101 Beta vulgaris HOM05D005152 ORTHO05D006162 4.2e-132 476.1 655 46.1
Sabra09G0050800 Salix brachista HOM05D005152 ORTHO05D006162 5.5e-132 475.7 706 43.6
TWI75G0576 Tripterygium wilfordii HOM05D005152 ORTHO05D006162 1.8e-130 470.7 679 43.9
FAN18G0878 Fragaria x ananassa HOM05D005152 ORTHO05D006162 5.2e-130 469.2 715 44.9
CiPaw.14G111400 Carya illinoinensis HOM05D005152 ORTHO05D006162 6.7e-130 468.8 534 51.9
SalBow4G0649 Salvia bowleyana HOM05D005152 ORTHO05D006162 2.0e-129 467.2 650 44.6
GSVIVG01029300001 Vitis vinifera HOM05D005152 ORTHO05D006162 2.4e-127 460.3 562 50.9
CAN.G1514.1 Capsicum annuum HOM05D005152 ORTHO05D006162 3.5e-126 456.4 661 43.0
Ah.06g194700 Amaranthus hybridus HOM05D005152 ORTHO05D006178 5.9e-126 455.7 588 46.6
Nitab4.5_0000236g0070 Nicotiana tabacum HOM05D005152 ORTHO05D006162 1.9e-124 450.7 663 43.4
Sopen07g023910 Solanum pennellii HOM05D005152 ORTHO05D006162 1.0e-122 444.9 657 42.9
Peaxi162Scf00014g00212 Petunia axillaris HOM05D005152 ORTHO05D006162 3.0e-122 443.4 676 42.2
Lsat_1_v5_gn_2_33000 Lactuca sativa HOM05D005152 ORTHO05D006162 1.2e-121 441.4 651 43.5
Solyc07g045370.3 Solanum lycopersicum HOM05D005152 ORTHO05D006162 1.5e-121 441.0 654 42.8
PGSC0003DMG400017379 Solanum tuberosum HOM05D005152 ORTHO05D006162 1.5e-121 441.0 659 42.3
TAR636G3031 Trochodendron aralioides HOM05D005152 ORTHO05D006162 8.3e-120 435.3 574 49.3
Migut.A00480 Erythranthe guttata HOM05D005152 ORTHO05D006162 1.4e-119 434.5 645 42.8
AUR62006555 Chenopodium quinoa HOM05D005152 ORTHO05D006162 9.1e-119 431.8 628 44.1
AUR62000209 Chenopodium quinoa HOM05D005152 ORTHO05D006162 7.7e-118 428.7 634 43.7
HanXRQChr14g0432261 Helianthus annuus HOM05D005152 ORTHO05D006162 8.5e-117 425.2 638 43.6
THA.LOC104799141 Tarenaya hassleriana HOM05D005152 ORTHO05D006162 7.2e-116 422.2 633 42.3
Prupe.3G132200 Prunus persica HOM05D005152 ORTHO05D006162 3.7e-112 409.8 464 53.0
THA.LOC104816332 Tarenaya hassleriana HOM05D005152 ORTHO05D006162 3.7e-112 409.8 622 42.1
PSO339G4523 Papaver somniferum HOM05D005152 ORTHO05D006162 4.9e-112 409.5 638 42.3
MBI19_g42986_MAGBIO Magnolia biondii HOM05D005152 ORTHO05D006162 1.8e-111 407.5 670 41.5
PSO384G2750 Papaver somniferum HOM05D005152 ORTHO05D006162 1.2e-110 404.8 638 42.2
Aqoxy1G00386 Aquilegia oxysepala HOM05D005152 ORTHO05D006162 6.6e-109 399.1 669 39.8
Carub.0006s1072 Capsella rubella HOM05D005152 ORTHO05D006162 1.5e-108 397.9 630 39.5
ECA238G0396 Erigeron canadensis HOM05D005152 ORTHO05D006162 9.5e-108 395.2 622 41.0
Oeu046802.1 Olea europaea HOM05D005152 ORTHO05D006162 1.2e-107 394.8 548 45.3
Rhsim13G0207600 Rhododendron simsii HOM05D005152 ORTHO05D006162 1.8e-106 391.0 348 60.1
Sc09g0005710 Simmondsia chinensis HOM05D005152 ORTHO05D006162 2.3e-106 390.6 682 40.2
Aa31LG3G15010 Aethionema arabicum HOM05D005152 ORTHO05D006162 4.0e-106 389.8 632 39.4
AT5G12220 Arabidopsis thaliana HOM05D005152 ORTHO05D006162 6.8e-106 389.0 633 39.8
Thhalv10012989m.g Eutrema salsugineum HOM05D005152 ORTHO05D006162 1.2e-105 388.3 656 38.7
AL6G23010 Arabidopsis lyrata HOM05D005152 ORTHO05D006162 2.0e-105 387.5 631 39.3
Aqoxy7G02965 Aquilegia oxysepala HOM05D005152 ORTHO05D006162 7.5e-105 385.6 652 39.7
DCAR_002098 Daucus carota HOM05D005152 ORTHO05D006162 3.7e-104 383.3 635 40.6
Sp6g31420 Schrenkiella parvula HOM05D005152 ORTHO05D006162 6.3e-104 382.5 667 37.8
CARHR200900 Cardamine hirsuta HOM05D005152 ORTHO05D006162 4.1e-103 379.8 635 38.7
Dinv36154 Davidia involucrata HOM05D005152 ORTHO05D006162 2.0e-102 377.5 511 46.2
BcaB01g05418 Brassica carinata HOM05D005152 ORTHO05D006162 1.0e-101 375.2 626 38.8
BraA03t09884Z Brassica rapa HOM05D005152 ORTHO05D006162 1.9e-100 370.9 628 38.5
Cc02_g30140 Coffea canephora HOM05D005152 ORTHO05D006162 6.8e-98 362.5 350 59.1
Nitab4.5_0000975g0020 Nicotiana tabacum HOM05D005152 ORTHO05D006162 3.4e-97 360.1 664 38.0
A03p05460 Brassica napus HOM05D005152 ORTHO05D006162 4.4e-97 359.8 654 37.6
MD08G1241200 Malus domestica HOM05D005152 ORTHO05D006162 1.1e-95 355.1 365 55.1
C03p06370 Brassica napus HOM05D005152 ORTHO05D006162 2.4e-95 354.0 653 36.9
BolC3t13143H Brassica oleracea HOM05D005152 ORTHO05D006162 2.4e-95 354.0 637 38.1
PGR119G0699 Punica granatum HOM05D005152 ORTHO05D006162 5.8e-89 332.8 628 36.1
ATR1096G100 Amborella trichopoda HOM05D005152 ORTHO05D006162 2.4e-87 327.4 657 36.2
Zm00001eb150380 Zea mays HOM05D005152 ORTHO05D006162 1.0e-85 322.0 637 35.8
Oeu022376.1 Olea europaea HOM05D005152 ORTHO05D006162 2.1e-83 314.3 548 40.0
unitig_748.g8148 Utricularia gibba HOM05D005152 ORTHO05D006162 4.7e-83 313.2 597 37.0
CDE04G1157 Ceratophyllum demersum HOM05D005152 ORTHO05D006162 3.7e-80 303.5 650 34.3
Os12g0189900 Oryza sativa ssp. japonica HOM05D005152 ORTHO05D006162 3.7e-80 303.5 647 36.3
HPP92_019896 Vanilla planifolia HOM05D005152 ORTHO05D006162 1.6e-78 298.1 528 39.6
Atru.chr11.1591 Acer truncatum HOM05D005152 ORTHO05D006162 3.5e-78 297.0 425 45.6
CDE07G1900 Ceratophyllum demersum HOM05D005152 ORTHO05D006162 1.5e-65 255.0 480 37.1
Atru.chr11.1399 Acer truncatum HOM05D005152 ORTHO05D006162 1.3e-61 241.9 212 59.0
Cpa.g.c26789.2 Carica papaya HOM05D005152 ORTHO05D006162 1.8e-58 231.5 429 37.5
SEGI_04037 Sequoiadendron giganteum HOM05D005152 ORTHO05D006162 2.1e-54 218.0 614 30.6
TAR633G1644 Trochodendron aralioides HOM05D005152 ORTHO05D006162 1.8e-53 214.9 162 69.1
Sc09g0005650 Simmondsia chinensis HOM05D005152 ORTHO05D006162 7.9e-46 189.5 272 45.2
Pp3c5_25710 Physcomitrium patens HOM05D005152 ORTHO05D006162 1.3e-43 182.2 565 29.4
Atru.chr10.529 Acer truncatum HOM05D005152 ORTHO05D006162 8.2e-43 179.5 386 35.2
MD08G1241100 Malus domestica HOM05D005152 ORTHO05D006162 2.5e-39 167.9 245 43.7
AagrBONN_evm.TU.Sc2ySwM_228.1465 Anthoceros agrestis HOM05D005152 ORTHO05D006162 4.2e-39 167.2 379 30.9
Sc09g0005740 Simmondsia chinensis HOM05D005152 ORTHO05D006162 1.2e-38 165.6 170 50.6
Pp3c25_13080 Physcomitrium patens HOM05D005152 ORTHO05D006162 1.5e-36 158.7 341 31.7
Mapoly0027s0150 Marchantia polymorpha HOM05D005152 ORTHO05D006162 1.3e-35 155.6 627 25.4
SGA_v2.0_scaffold96G29125 Striga asiatica HOM05D005152 ORTHO05D006162 2.4e-34 151.4 144 56.9
A02p39210 Brassica napus HOM05D005152 ORTHO05D006162 1.5e-33 148.7 388 34.8
SMO361G0105 Selaginella moellendorffii HOM05D005152 ORTHO05D006162 8.5e-32 142.9 564 23.6
Sabra16G0168500 Salix brachista HOM05D005152 ORTHO05D006162 3.9e-29 134.0 381 33.9
Rhsim13G0207500 Rhododendron simsii HOM05D005152 ORTHO05D006162 9.7e-28 129.4 384 30.7
Atru.chr11.1397 Acer truncatum HOM05D005152 ORTHO05D006162 1.3e-27 129.0 189 42.3
SGA_v2.0_scaffold79G25574 Striga asiatica HOM05D005152 ORTHO05D006162 1.1e-26 125.9 111 58.6
CAN.G437.19 Capsicum annuum HOM05D005152 ORTHO05D006162 2.4e-26 124.8 129 50.4
MCO05G618 Micromonas commoda HOM05D005152 ORTHO05D006162 2.4e-26 124.8 175 38.9
Sc09g0005680 Simmondsia chinensis HOM05D005152 ORTHO05D006162 2.5e-23 114.8 258 33.7
Hma1.2p1_0460F.1_g157490 Hydrangea macrophylla HOM05D005152 ORTHO05D006162 3.6e-22 110.9 164 48.2
Oeu046803.1 Olea europaea HOM05D005152 ORTHO05D006162 2.6e-20 104.8 91 61.5
Atru.chr11.1398 Acer truncatum HOM05D005152 ORTHO05D006162 1.1e-18 99.4 145 46.9
GSVIVG01029301001 Vitis vinifera HOM05D005152 ORTHO05D006162 2.4e-18 98.2 84 56.0
Cre01.g002201 Chlamydomonas reinhardtii HOM05D005152 ORTHO05D006162 2.0e-17 95.1 230 25.7
Oeu053695.1 Olea europaea HOM05D005152 ORTHO05D006162 1.0e-16 92.8 191 34.6
Sc09g0005660 Simmondsia chinensis HOM05D005152 ORTHO05D006162 6.5e-16 90.1 70 61.4
Sc09g0005670 Simmondsia chinensis HOM05D005152 ORTHO05D006162 1.5e-15 89.0 147 36.1
Sc09g0005720 Simmondsia chinensis HOM05D005152 ORTHO05D006162 1.7e-11 75.5 74 51.4
PGSC0003DMG400035925 Solanum tuberosum HOM05D005152 ORTHO05D006162 3.7e-11 74.3 113 42.5
Hund07429 Selenicereus undatus HOM05D005152 ORTHO05D006162 6.3e-11 73.6 113 41.6
Cpa.g.c26789.1 Carica papaya HOM05D005152 ORTHO05D006162 1.1e-10 72.8 59 61.0
Aqoxy4G01955 Aquilegia oxysepala HOM05D005152 ORTHO05D006162 2.4e-10 71.6 210 34.3
Cpa.g.sc189.1 Carica papaya HOM05D005152 ORTHO05D006162 4.2e-07 60.8 56 55.4
CBR_g41105 Chara braunii HOM05D001740 ORTHO05D001468 2.7e-06 58.2 142 28.9
Sc09g0001090 Simmondsia chinensis HOM05D005152 ORTHO05D006162 8.0e-06 56.6 35 68.6


User provided reference genes

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