Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.008G201800 Phaseolus vulgaris HOM05D006179 ORTHO05D008370 7.2e-164 580.5 287 100.0
VMungo0647G1137 Vigna mungo HOM05D006179 ORTHO05D008370 9.8e-145 516.9 287 88.9
Glyma.14G035700 Glycine max HOM05D006179 ORTHO05D008370 2.8e-136 488.8 290 84.8
Glyma.02G279000 Glycine max HOM05D006179 ORTHO05D008370 3.7e-136 488.4 291 83.5
LjContig00564g0004002 Lotus japonicus HOM05D006179 ORTHO05D008370 1.3e-120 436.8 291 76.3
Medtr5g089330 Medicago truncatula HOM05D006179 ORTHO05D008370 3.7e-120 435.3 293 73.4
Psat2g020720 Pisum sativum HOM05D006179 ORTHO05D008370 3.9e-117 425.2 294 72.4
TPR.G16411 Trifolium pratense HOM05D006179 ORTHO05D008370 1.5e-116 423.3 297 73.4
Lalb_Chr04g0249261 Lupinus albus HOM05D006179 ORTHO05D008370 7.1e-111 404.4 291 71.8
arahy.Tifrunner.gnm1.ann1.66DN5N Arachis hypogaea HOM05D006179 ORTHO05D008370 3.9e-109 398.7 266 77.8
arahy.Tifrunner.gnm1.ann1.0RM1GA Arachis hypogaea HOM05D006179 ORTHO05D008370 1.6e-107 393.3 272 76.5
Ca_06199_v3 Cicer arietinum L. HOM05D006179 ORTHO05D008370 1.8e-106 389.8 227 81.5
QL01p016926 Quercus lobata HOM05D006179 ORTHO05D008370 8.9e-106 387.5 296 68.2
PGR119G2402 Punica granatum HOM05D006179 ORTHO05D008370 5.8e-105 384.8 298 67.1
GSVIVG01037292001 Vitis vinifera HOM05D006179 ORTHO05D008370 1.3e-104 383.6 291 67.4
Hma1.2p1_0470F.1_g159226 Hydrangea macrophylla HOM05D006179 ORTHO05D008370 3.8e-104 382.1 274 71.5
Potri.009G069300 Populus trichocarpa HOM05D006179 ORTHO05D008370 3.8e-104 382.1 293 68.9
Cfa009884 Carpinus fangiana HOM05D006179 ORTHO05D008370 8.4e-104 380.9 235 77.9
PGSC0003DMG401004716 Solanum tuberosum HOM05D006179 ORTHO05D008370 9.2e-103 377.5 226 79.2
COL.COLO4_24491 Corchorus olitorius HOM05D006179 ORTHO05D008370 1.2e-102 377.1 286 67.5
TPR.G16393 Trifolium pratense HOM05D006179 ORTHO05D008370 1.6e-102 376.7 294 67.0
CSS0020940 Camellia sinensis var. sinensis HOM05D006179 ORTHO05D008370 2.1e-102 376.3 259 73.4
Oeu061700.1 Olea europaea HOM05D006179 ORTHO05D008370 2.7e-102 375.9 228 79.8
Nitab4.5_0001290g0120 Nicotiana tabacum HOM05D006179 ORTHO05D008370 1.0e-101 374.0 228 79.4
Solyc12g099800.2 Solanum lycopersicum HOM05D006179 ORTHO05D008370 1.3e-101 373.6 226 78.3
Gohir.A07G121100 Gossypium hirsutum HOM05D006179 ORTHO05D008370 1.7e-101 373.2 237 75.9
Sopen12g034430 Solanum pennellii HOM05D006179 ORTHO05D008370 2.3e-101 372.9 226 78.3
Migut.D00669 Erythranthe guttata HOM05D006179 ORTHO05D008370 3.0e-101 372.5 227 78.9
Gohir.D07G125300 Gossypium hirsutum HOM05D006179 ORTHO05D008370 5.1e-101 371.7 227 77.5
MD11G1184200 Malus domestica HOM05D006179 ORTHO05D008370 8.7e-101 370.9 302 63.9
Atru.chr3.2957 Acer truncatum HOM05D006179 ORTHO05D008370 2.5e-100 369.4 250 72.4
Prupe.4G263800 Prunus persica HOM05D006179 ORTHO05D008370 5.6e-100 368.2 289 65.1
RcHm_v2.0_Chr5g0050451 Rosa chinensis HOM05D006179 ORTHO05D008370 5.6e-100 368.2 278 68.3
CiPaw.14G111900 Carya illinoinensis HOM05D006179 ORTHO05D008370 7.3e-100 367.9 281 69.4
Hund21973 Selenicereus undatus HOM05D006179 ORTHO05D008370 9.6e-100 367.5 266 69.2
SalBow6G4024 Salvia bowleyana HOM05D006179 ORTHO05D008370 1.2e-99 367.1 226 77.0
HanXRQChr13g0390131 Helianthus annuus HOM05D006179 ORTHO05D008370 1.6e-99 366.7 292 65.4
SGA_v2.0_scaffold8G04541 Striga asiatica HOM05D006179 ORTHO05D008370 8.1e-99 364.4 228 76.8
Lj2C622G16 Lonicera japonica HOM05D006179 ORTHO05D008370 1.4e-98 363.6 302 63.2
TAR623G0610 Trochodendron aralioides HOM05D006179 ORTHO05D008370 3.1e-98 362.5 249 72.3
CANSAT54G1770 Cannabis sativa HOM05D006179 ORTHO05D008370 4.0e-98 362.1 227 76.7
Rhsim01G0195300 Rhododendron simsii HOM05D006179 ORTHO05D008370 5.3e-98 361.7 249 70.7
ClCG02G022800 Citrullus lanatus HOM05D006179 ORTHO05D008370 9.0e-98 360.9 289 64.7
Cc00_g17410 Coffea canephora HOM05D006179 ORTHO05D008370 9.0e-98 360.9 233 74.7
PSO384G2846 Papaver somniferum HOM05D006179 ORTHO05D008370 9.0e-98 360.9 269 66.5
vmacro14276 Vaccinium macrocarpon HOM05D006179 ORTHO05D008370 1.2e-97 360.5 277 65.0
EL10Ac4g10106 Beta vulgaris HOM05D006179 ORTHO05D008370 1.5e-97 360.1 266 66.5
FvH4_3g27810 Fragaria vesca HOM05D006179 ORTHO05D008370 2.0e-97 359.8 228 76.8
PSO339G0647 Papaver somniferum HOM05D006179 ORTHO05D008370 2.6e-97 359.4 259 67.6
Ah.04g159740 Amaranthus hybridus HOM05D006179 ORTHO05D008370 3.4e-97 359.0 228 74.6
Sc16g0011000 Simmondsia chinensis HOM05D006179 ORTHO05D008370 3.4e-97 359.0 224 76.8
Haze_23248 Corylus avellana HOM05D006179 ORTHO05D008370 4.4e-97 358.6 269 65.1
Sed0005347 Sechium edule HOM05D006179 ORTHO05D008370 4.4e-97 358.6 274 66.4
TWI79G0794 Tripterygium wilfordii HOM05D006179 ORTHO05D008370 5.8e-97 358.2 287 64.8
Aqoxy1G00395 Aquilegia oxysepala HOM05D006179 ORTHO05D008370 9.9e-97 357.5 218 75.7
AUR62000204 Chenopodium quinoa HOM05D006179 ORTHO05D008370 9.9e-97 357.5 223 73.5
Sabra09G0052200 Salix brachista HOM05D006179 ORTHO05D008370 1.3e-96 357.1 335 59.4
Nn2g14782 Nelumbo nucifera HOM05D006179 ORTHO05D008370 2.9e-96 355.9 219 77.6
FAN25G1664 Fragaria x ananassa HOM05D006179 ORTHO05D008370 6.4e-96 354.8 296 64.5
Gorai.001G135100 Gossypium raimondii HOM05D006179 ORTHO05D008370 1.4e-95 353.6 218 76.6
TWI31G1173 Tripterygium wilfordii HOM05D006179 ORTHO05D008370 1.9e-95 353.2 287 63.8
CAN.G1305.17 Capsicum annuum HOM05D006179 ORTHO05D008370 4.2e-95 352.1 226 74.8
Thecc.09G246900 Theobroma cacao HOM05D006179 ORTHO05D008370 5.4e-95 351.7 337 57.9
Peaxi162Scf00272g00828 Petunia axillaris HOM05D006179 ORTHO05D008370 6.0e-94 348.2 201 80.6
unitig_62.g23875 Utricularia gibba HOM05D006179 ORTHO05D008370 7.8e-94 347.8 226 73.0
AUR62006552 Chenopodium quinoa HOM05D006179 ORTHO05D008370 1.3e-93 347.1 229 71.2
Zm00001eb331180 Zea mays HOM05D006179 ORTHO05D008370 3.9e-93 345.5 279 62.4
CDE02G1620 Ceratophyllum demersum HOM05D006179 ORTHO05D008370 1.9e-92 343.2 218 75.2
ATR0621G006 Amborella trichopoda HOM05D006179 ORTHO05D008370 4.8e-91 338.6 218 72.9
Nn7g36750 Nelumbo nucifera HOM05D006179 ORTHO05D008370 4.8e-91 338.6 219 74.0
Os07g0687500 Oryza sativa ssp. japonica HOM05D006179 ORTHO05D008370 8.1e-91 337.8 243 67.9
Cpa.g.sc157.57 Carica papaya HOM05D006179 ORTHO05D008370 1.4e-90 337.0 296 61.5
Duzib170G0239 Durio zibethinus HOM05D006179 ORTHO05D008370 5.3e-90 335.1 285 63.2
FAN21G1036 Fragaria x ananassa HOM05D006179 ORTHO05D008370 1.4e-87 327.0 236 70.3
Atru.chr3.2952 Acer truncatum HOM05D006179 ORTHO05D008370 2.1e-86 323.2 210 75.7
FAN11G2659 Fragaria x ananassa HOM05D000059 ORTHO05D008370 6.0e-86 321.6 201 79.1
DCAR_024400 Daucus carota HOM05D006179 ORTHO05D008370 1.3e-85 320.5 226 69.9
Lsat_1_v5_gn_5_65341 Lactuca sativa HOM05D006179 ORTHO05D008370 1.8e-85 320.1 286 59.8
Aa31LG1G8830 Aethionema arabicum HOM05D006179 ORTHO05D008370 1.3e-83 313.9 244 64.8
THA.LOC104811194 Tarenaya hassleriana HOM05D006179 ORTHO05D008370 1.3e-83 313.9 245 62.9
CARHR193590 Cardamine hirsuta HOM05D006179 ORTHO05D008370 2.8e-83 312.8 261 61.3
Thhalv10014227m.g Eutrema salsugineum HOM05D006179 ORTHO05D008370 1.1e-82 310.8 261 62.8
Nitab4.5_0002310g0120 Nicotiana tabacum HOM05D006179 ORTHO05D008370 9.0e-82 307.8 225 69.3
BolC3t13573H Brassica oleracea HOM05D006179 ORTHO05D008370 1.5e-81 307.0 227 65.2
C03p11040 Brassica napus HOM05D006179 ORTHO05D008370 3.4e-81 305.8 227 64.8
A02p05510 Brassica napus HOM05D006179 ORTHO05D008370 1.7e-80 303.5 275 58.2
Sp6g25040 Schrenkiella parvula HOM05D006179 ORTHO05D008370 1.7e-80 303.5 260 60.8
BcaB01g04864 Brassica carinata HOM05D006179 ORTHO05D008370 3.8e-80 302.4 232 63.4
A03p09460 Brassica napus HOM05D006179 ORTHO05D008370 4.9e-80 302.0 258 57.8
BraA03t10264Z Brassica rapa HOM05D006179 ORTHO05D008370 4.9e-80 302.0 258 57.8
BcaC03g13669 Brassica carinata HOM05D006179 ORTHO05D008370 2.5e-79 299.7 263 59.7
Carub.0006s1771 Capsella rubella HOM05D006179 ORTHO05D008370 3.2e-79 299.3 261 58.6
AT5G19370 Arabidopsis thaliana HOM05D006179 ORTHO05D008370 4.2e-79 298.9 239 61.9
HPP92_028459 Vanilla planifolia HOM05D006179 ORTHO05D008370 4.2e-79 298.9 182 73.1
MELO3C014557.2 Cucumis melo HOM05D006179 ORTHO05D008370 7.1e-79 298.1 253 62.8
AL6G30860 Arabidopsis lyrata HOM05D006179 ORTHO05D008370 1.6e-78 297.0 260 58.8
BraA02t05502Z Brassica rapa HOM05D006179 ORTHO05D008370 3.0e-77 292.7 299 53.2
SMO145G0007 Selaginella moellendorffii HOM05D006179 ORTHO05D008370 1.3e-75 287.3 219 63.0
Mapoly0003s0043 Marchantia polymorpha HOM05D006179 ORTHO05D008370 2.1e-75 286.6 234 58.5
Pp3c3_13280 Physcomitrium patens HOM05D006179 ORTHO05D008370 8.2e-75 284.6 254 55.5
CsaV3_6G038930 Cucumis sativus L. HOM05D006179 ORTHO05D008370 1.1e-74 284.3 234 64.5
BNapus_Darmor_BZH_scaffold_38p02550 Brassica napus HOM05D006179 ORTHO05D008370 4.0e-74 282.3 254 58.7
AagrBONN_evm.TU.Sc2ySwM_117.3174 Anthoceros agrestis HOM05D006179 ORTHO05D008370 5.3e-74 282.0 242 58.3
Eucgr.J00687 Eucalyptus grandis HOM05D006179 ORTHO05D008370 6.5e-72 275.0 151 83.4
CBR_g54969 Chara braunii HOM05D006179 ORTHO05D008370 6.0e-70 268.5 251 55.8
BcaB01g05143 Brassica carinata HOM05D006179 ORTHO05D008370 5.1e-69 265.4 179 68.7
Ciclev10017644m.g Citrus clementina HOM05D006179 ORTHO05D008370 4.3e-68 262.3 151 79.5
ECA233G4787 Erigeron canadensis HOM05D006179 ORTHO05D008370 1.2e-62 244.2 143 79.0
Dinv36157 Davidia involucrata HOM05D006179 ORTHO05D008370 6.1e-62 241.9 216 62.5
Peaxi162Scf00174g00223 Petunia axillaris HOM05D006179 ORTHO05D008370 1.2e-57 227.6 196 61.7
Manes.02G138400 Manihot esculenta HOM05D006179 ORTHO05D008370 2.0e-57 226.9 190 64.7
Hund21974 Selenicereus undatus HOM05D006179 ORTHO05D008240 9.4e-55 218.0 185 63.8
AUR62040469 Chenopodium quinoa HOM05D006179 ORTHO05D008370 2.0e-52 210.3 145 67.6
SEGI_16296 Sequoiadendron giganteum HOM05D006179 ORTHO05D008370 4.4e-52 209.1 153 65.4
AUR62037598 Chenopodium quinoa HOM05D006179 ORTHO05D007344 4.7e-46 189.1 143 67.1
AUR62042212 Chenopodium quinoa HOM05D006179 ORTHO05D008370 3.6e-38 162.9 146 57.5
Cre07.g350400 Chlamydomonas reinhardtii HOM05D006179 ORTHO05D008370 1.8e-37 160.6 177 40.1
SalBow6G2129 Salvia bowleyana HOM05D006179 ORTHO05D353266 7.7e-33 145.2 149 58.4
MCO13G336 Micromonas commoda HOM05D006179 ORTHO05D008370 1.7e-32 144.1 198 39.4
CSS0040024 Camellia sinensis var. sinensis HOM05D006179 ORTHO05D008370 3.0e-21 106.7 70 74.3
CSS0040434 Camellia sinensis var. sinensis HOM05D006179 ORTHO05D008370 2.2e-19 100.5 137 43.8
QL02p019212 Quercus lobata HOM05D006179 ORTHO05D008370 4.6e-09 66.2 36 80.6
MD03G1195100 Malus domestica HOM05D004980 ORTHO05D006505 5.0e-08 62.8 101 33.7
MD11G1211400 Malus domestica HOM05D004980 ORTHO05D006505 5.0e-08 62.8 101 32.7
Haze_26617 Corylus avellana HOM05D006179 ORTHO05D164269 3.3e-07 60.1 95 36.8
MCO16G521 Micromonas commoda HOM05D005637 ORTHO05D006983 3.3e-07 60.1 99 39.4
Sabra16G0233900 Salix brachista HOM05D004980 ORTHO05D006505 4.3e-07 59.7 105 32.4
LjContig00272g0012473 Lotus japonicus HOM05D004980 ORTHO05D006505 5.6e-07 59.3 97 33.0
CSS0002819 Camellia sinensis var. sinensis HOM05D004980 ORTHO05D006505 7.3e-07 58.9 100 32.0
Cpa.g.sc12.256 Carica papaya HOM05D004980 ORTHO05D006505 7.3e-07 58.9 101 33.7
Prupe.4G221100 Prunus persica HOM05D004980 ORTHO05D006505 7.3e-07 58.9 101 32.7
CANSAT11G1616 Cannabis sativa HOM05D004980 ORTHO05D006505 1.6e-06 57.8 99 31.3
Ca_06343_v3 Cicer arietinum L. HOM05D004980 ORTHO05D006505 1.6e-06 57.8 102 32.4
TAR624G0219 Trochodendron aralioides HOM05D004980 ORTHO05D006505 1.6e-06 57.8 101 30.7
VMungo0647G0060 Vigna mungo HOM05D004980 ORTHO05D006505 1.6e-06 57.8 100 32.0
arahy.Tifrunner.gnm1.ann1.C5REQA Arachis hypogaea HOM05D004980 ORTHO05D006505 2.1e-06 57.4 100 31.0
Manes.03G132700 Manihot esculenta HOM05D004980 ORTHO05D006505 2.1e-06 57.4 101 30.7
Psat2g012600 Pisum sativum HOM05D004980 ORTHO05D006505 2.1e-06 57.4 95 31.6
BcaB08g35877 Brassica carinata HOM05D004980 ORTHO05D006505 2.8e-06 57.0 125 29.6
Potri.001G355800 Populus trichocarpa HOM05D004980 ORTHO05D006505 2.8e-06 57.0 101 32.7
FAN16G1125 Fragaria x ananassa HOM05D004980 ORTHO05D006505 3.6e-06 56.6 101 33.7
Sed0026676 Sechium edule HOM05D004980 ORTHO05D006505 4.7e-06 56.2 130 26.2
Medtr5g093580 Medicago truncatula HOM05D004980 ORTHO05D006505 6.2e-06 55.8 102 30.4
TPR.G1188 Trifolium pratense HOM05D004980 ORTHO05D006505 6.2e-06 55.8 101 30.7
Carub.0008s1543 Capsella rubella HOM05D004980 ORTHO05D006505 8.0e-06 55.5 102 30.4
FvH4_3g23360 Fragaria vesca HOM05D004980 ORTHO05D006505 8.0e-06 55.5 97 33.0
FAN11G2764 Fragaria x ananassa HOM05D004980 ORTHO05D006505 8.0e-06 55.5 97 33.0
FAN21G0499 Fragaria x ananassa HOM05D004980 ORTHO05D006505 8.0e-06 55.5 97 33.0
FAN25G0097 Fragaria x ananassa HOM05D004980 ORTHO05D006505 8.0e-06 55.5 97 33.0
Phvul.008G270700 Phaseolus vulgaris HOM05D004980 ORTHO05D006505 8.0e-06 55.5 102 32.4
RcHm_v2.0_Chr5g0041141 Rosa chinensis HOM05D004980 ORTHO05D006505 8.0e-06 55.5 97 33.0
TPR.G4803 Trifolium pratense HOM05D004980 ORTHO05D006505 8.0e-06 55.5 101 30.7


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