Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.008G200100 Phaseolus vulgaris HOM05D007739 ORTHO05D009838 5.1e-99 364.4 181 100.0
Glyma.02G280600 Glycine max HOM05D007739 ORTHO05D009838 5.5e-77 291.2 183 81.4
VMungo0647G2062 Vigna mungo HOM05D007739 ORTHO05D009838 4.7e-76 288.1 240 67.1
Glyma.14G034000 Glycine max HOM05D007739 ORTHO05D009838 2.6e-74 282.3 183 80.3
LjContig00049g0023861 Lotus japonicus HOM05D007739 ORTHO05D009838 3.6e-68 261.9 185 73.5
Ca_06221_v3 Cicer arietinum L. HOM05D007739 ORTHO05D009838 1.4e-67 260.0 186 74.2
TPR.G19359 Trifolium pratense HOM05D007739 ORTHO05D009838 9.7e-58 227.3 184 67.9
Cfa009840 Carpinus fangiana HOM05D007739 ORTHO05D009838 8.3e-41 171.0 182 54.4
CSS0046040 Camellia sinensis var. sinensis HOM05D007739 ORTHO05D009838 2.4e-40 169.5 192 52.1
Rhsim01G0194300 Rhododendron simsii HOM05D007739 ORTHO05D009838 1.6e-36 156.8 186 50.0
Actinidia11663 Actinidia chinensis HOM05D007739 ORTHO05D009838 6.1e-36 154.8 188 49.5
Dinv36186 Davidia involucrata HOM05D002367 ORTHO05D002566 4.0e-35 152.1 192 49.0
Haze_23208 Corylus avellana HOM05D007739 ORTHO05D009838 2.0e-34 149.8 161 53.4
GSVIVG01037253001 Vitis vinifera HOM05D007739 ORTHO05D009838 2.2e-33 146.4 199 49.2
CiPaw.14G114800 Carya illinoinensis HOM05D007739 ORTHO05D009838 2.9e-33 146.0 189 49.7
Nitab4.5_0001095g0030 Nicotiana tabacum HOM05D007739 ORTHO05D009838 6.4e-33 144.8 197 49.2
PGR119G1777 Punica granatum HOM05D007739 ORTHO05D009838 1.6e-28 130.2 202 45.5
TAR633G0364 Trochodendron aralioides HOM05D007739 ORTHO05D009838 2.1e-28 129.8 188 43.1
Peaxi162Scf00469g00320 Petunia axillaris HOM05D007739 ORTHO05D009838 6.2e-28 128.3 185 45.9
Nitab4.5_0006104g0010 Nicotiana tabacum HOM05D007739 ORTHO05D009838 8.0e-28 127.9 219 44.3
Sc03g0010980 Simmondsia chinensis HOM05D007739 ORTHO05D009838 8.9e-27 124.4 183 43.2
DCAR_002115 Daucus carota HOM05D007739 ORTHO05D009838 1.5e-26 123.6 192 45.3
Cc01_g05640 Coffea canephora HOM05D007739 ORTHO05D009838 2.6e-26 122.9 185 44.3
Potri.009G072000 Populus trichocarpa HOM05D007739 ORTHO05D009838 9.8e-26 120.9 191 45.0
Sp6g31280 Schrenkiella parvula HOM05D007739 ORTHO05D009838 6.4e-25 118.2 188 41.5
Migut.D00651 Erythranthe guttata HOM05D007739 ORTHO05D009838 1.9e-24 116.7 196 43.9
Cpa.g.sc157.69 Carica papaya HOM05D007739 ORTHO05D009838 3.5e-23 112.5 180 43.9
Sopen07g027120 Solanum pennellii HOM05D007739 ORTHO05D009838 7.8e-23 111.3 197 43.1
PGSC0003DMG400020420 Solanum tuberosum HOM05D007739 ORTHO05D009838 2.3e-22 109.8 193 43.0
AL6G23160 Arabidopsis lyrata HOM05D007739 ORTHO05D009838 3.9e-22 109.0 194 40.2
ECA233G0993 Erigeron canadensis HOM05D007739 ORTHO05D009838 3.9e-22 109.0 190 40.0
SalBow6G6289 Salvia bowleyana HOM05D007739 ORTHO05D009838 3.9e-22 109.0 202 40.1
Solyc07g055110.3 Solanum lycopersicum HOM05D007739 ORTHO05D009838 5.1e-22 108.6 197 43.1
TAR633G2358 Trochodendron aralioides HOM05D007739 ORTHO05D009838 5.1e-22 108.6 183 39.9
SGA_v2.0_scaffold29G12264 Striga asiatica HOM05D007739 ORTHO05D009838 1.1e-21 107.5 186 42.5
A10p25460 Brassica napus HOM05D007739 ORTHO05D009838 4.3e-21 105.5 189 38.6
Thhalv10014740m.g Eutrema salsugineum HOM05D007739 ORTHO05D009838 4.7e-20 102.1 192 36.5
Aa31LG3G14870 Aethionema arabicum HOM05D007739 ORTHO05D009838 8.1e-20 101.3 191 37.2
BolC9t59287H Brassica oleracea HOM05D007739 ORTHO05D009838 8.1e-20 101.3 189 38.1
BraA10t44610Z Brassica rapa HOM05D007739 ORTHO05D009838 1.1e-19 100.9 190 36.8
A03p38660 Brassica napus HOM05D007739 ORTHO05D009838 2.3e-19 99.8 194 36.6
BraA03t13013Z Brassica rapa HOM05D007739 ORTHO05D009838 2.3e-19 99.8 194 36.6
Sp3g12450 Schrenkiella parvula HOM05D007739 ORTHO05D009838 3.1e-19 99.4 182 37.9
C09p64530 Brassica napus HOM05D007739 ORTHO05D009838 4.0e-19 99.0 189 37.6
BcaB04g18824 Brassica carinata HOM05D007739 ORTHO05D009838 5.2e-19 98.6 187 35.8
AT5G12360 Arabidopsis thaliana HOM05D007739 ORTHO05D009838 2.6e-18 96.3 192 36.5
C03p46780 Brassica napus HOM05D007739 ORTHO05D009838 2.6e-18 96.3 190 36.3
Oeu001493.2 Olea europaea HOM05D007739 ORTHO05D009838 2.6e-18 96.3 213 35.2
BolC3t16943H Brassica oleracea HOM05D007739 ORTHO05D009838 1.3e-17 94.0 191 36.1
Thhalv10021564m.g Eutrema salsugineum HOM05D007739 ORTHO05D009838 1.3e-17 94.0 194 37.1
BcaC01g03953 Brassica carinata HOM05D007739 ORTHO05D009838 1.7e-17 93.6 194 36.1
MSTRG.21351 Avicennia marina HOM05D007739 ORTHO05D009838 1.9e-16 90.1 180 37.8
CARHR200750 Cardamine hirsuta HOM05D007739 ORTHO05D009838 9.2e-16 87.8 167 37.7
unitig_578.g16651 Utricularia gibba HOM05D007739 ORTHO05D009838 9.2e-16 87.8 185 36.2
AL3G26440 Arabidopsis lyrata HOM05D007739 ORTHO05D009838 1.6e-15 87.0 196 33.2
C01p50440 Brassica napus HOM05D007739 ORTHO05D009838 2.7e-15 86.3 180 37.8
BcaNung07312 Brassica carinata HOM05D007739 ORTHO05D009838 3.5e-15 85.9 180 37.8
AT3G14190 Arabidopsis thaliana HOM05D007739 ORTHO05D009838 4.6e-15 85.5 197 34.5
BolC1t04996H Brassica oleracea HOM05D007739 ORTHO05D009838 4.6e-15 85.5 182 37.9
Lsat_1_v5_gn_5_70921 Lactuca sativa HOM05D007739 ORTHO05D009838 4.6e-15 85.5 177 36.7
CARHR089070 Cardamine hirsuta HOM05D007739 ORTHO05D009838 7.8e-15 84.7 203 33.0
THA.LOC104815614 Tarenaya hassleriana HOM05D007739 ORTHO05D009838 1.0e-14 84.3 185 35.7
THA.LOC104815612 Tarenaya hassleriana HOM05D007739 ORTHO05D009838 5.1e-14 82.0 184 35.3
Carub.0003s1380 Capsella rubella HOM05D007739 ORTHO05D009838 6.6e-14 81.6 186 35.5
A01p39500 Brassica napus HOM05D007739 ORTHO05D009838 4.3e-13 79.0 170 36.5
BraA01t03991Z Brassica rapa HOM05D007739 ORTHO05D009838 3.6e-12 75.9 170 35.3
Actinidia23986 Actinidia chinensis HOM05D006191 ORTHO05D007660 4.7e-12 75.5 61 60.7
Nn7g36621 Nelumbo nucifera HOM05D007739 ORTHO05D009838 4.9e-09 65.5 128 35.9
Aa31LG8G1440 Aethionema arabicum HOM05D007739 ORTHO05D009838 1.6e-07 60.5 113 40.7
Nn7g36303 Nelumbo nucifera HOM05D007739 ORTHO05D009838 6.0e-07 58.5 60 51.7
Aqoxy1G02236 Aquilegia oxysepala HOM05D007739 ORTHO05D009838 3.9e-06 55.8 163 31.3
PSO063G3044 Papaver somniferum HOM05D006494 ORTHO05D007787 3.9e-06 55.8 81 44.4
PSO782G5664 Papaver somniferum HOM05D006494 ORTHO05D007787 3.9e-06 55.8 127 34.6


User provided reference genes

Program Settings