Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.008G198200 Phaseolus vulgaris HOM05D011707 ORTHO05D000181 8.5e-69 263.5 125 100.0
Phvul.001G062200 Phaseolus vulgaris HOM05D011707 ORTHO05D000181 5.9e-54 214.2 110 96.4
Phvul.001G062500 Phaseolus vulgaris HOM05D011707 ORTHO05D000181 2.9e-53 211.8 111 94.6
Phvul.008G198000 Phaseolus vulgaris HOM05D011707 ORTHO05D000181 3.8e-53 211.5 111 94.6
Phvul.001G062400 Phaseolus vulgaris HOM05D011707 ORTHO05D000181 5.5e-52 207.6 110 94.5
Phvul.008G197914 Phaseolus vulgaris HOM05D011707 ORTHO05D000181 8.0e-51 203.8 111 91.9
Phvul.008G198100 Phaseolus vulgaris HOM05D011707 ORTHO05D000181 2.3e-42 175.6 111 82.9
Phvul.008G198500 Phaseolus vulgaris HOM05D000275 ORTHO05D000181 2.6e-33 145.6 116 62.1
Phvul.001G062300 Phaseolus vulgaris HOM05D000275 ORTHO05D000181 5.7e-33 144.4 116 61.2
Phvul.008G198414 Phaseolus vulgaris HOM05D000275 ORTHO05D000181 7.5e-33 144.1 116 61.2
Phvul.008G198300 Phaseolus vulgaris HOM05D000275 ORTHO05D000181 2.8e-32 142.1 116 59.5
Phvul.008G197700 Phaseolus vulgaris HOM05D000275 ORTHO05D000181 7.0e-31 137.5 117 58.1
Phvul.008G197800 Phaseolus vulgaris HOM05D000275 ORTHO05D000181 2.0e-30 136.0 117 58.1
Phvul.008G198900 Phaseolus vulgaris HOM05D000275 ORTHO05D000181 4.5e-30 134.8 117 58.1
Phvul.008G198400 Phaseolus vulgaris HOM05D000275 ORTHO05D000181 2.5e-28 129.0 117 55.6
Phvul.008G198700 Phaseolus vulgaris HOM05D000275 ORTHO05D000181 3.3e-28 128.6 116 56.9
VMungo0068G0001 Vigna mungo HOM05D011707 ORTHO05D000181 2.0e-25 119.4 111 53.2
Phvul.001G062350 Phaseolus vulgaris HOM05D011707 ORTHO05D000181 2.2e-24 115.9 116 54.3
VMungo0647G1529 Vigna mungo HOM05D011707 ORTHO05D000181 1.9e-23 112.8 111 47.7
Phvul.008G198600 Phaseolus vulgaris HOM05D000275 ORTHO05D000181 2.4e-23 112.5 92 54.3
Phvul.008G198800 Phaseolus vulgaris HOM05D011707 ORTHO05D000181 3.9e-21 105.1 94 48.9
VMungo0647G2571 Vigna mungo HOM05D011707 ORTHO05D000181 7.3e-20 100.9 117 48.7
VMungo0647G2261 Vigna mungo HOM05D011707 ORTHO05D000181 2.1e-19 99.4 103 51.5
VMungo0647G1858 Vigna mungo HOM05D011707 ORTHO05D000181 2.3e-18 95.9 102 49.0
Glyma.14G032800 Glycine max HOM05D000275 ORTHO05D000181 3.4e-17 92.0 104 45.2
Glyma.09G055000 Glycine max HOM05D000275 ORTHO05D000181 6.0e-14 81.3 104 38.5
Glyma.09G055100 Glycine max HOM05D000275 ORTHO05D000181 6.0e-14 81.3 104 38.5
Lalb_Chr17g0348091 Lupinus albus HOM05D000275 ORTHO05D000181 3.0e-13 79.0 115 38.3
VMungo1292G0001 Vigna mungo HOM05D000275 ORTHO05D000181 9.5e-12 73.9 104 34.6
Lalb_Chr06g0169701 Lupinus albus HOM05D000275 ORTHO05D000181 1.6e-11 73.2 115 33.9
VMungo0647G0074 Vigna mungo HOM05D000275 ORTHO05D000181 1.6e-11 73.2 105 33.3
RcHm_v2.0_Chr1g0347601 Rosa chinensis HOM05D000275 ORTHO05D000181 1.2e-09 67.0 106 32.1
Lalb_Chr06g0169691 Lupinus albus HOM05D000275 ORTHO05D000181 2.6e-09 65.9 104 36.5
Sc01g0002760 Simmondsia chinensis HOM05D000275 ORTHO05D000181 3.4e-09 65.5 88 37.5
Cfa023540 Carpinus fangiana HOM05D000112 ORTHO05D001327 4.4e-09 65.1 112 26.8
Glyma.03G257200 Glycine max HOM05D000275 ORTHO05D000181 4.4e-09 65.1 94 34.0
CANSAT56G2214 Cannabis sativa HOM05D000275 ORTHO05D000181 5.8e-09 64.7 78 33.3
Lalb_Chr07g0188481 Lupinus albus HOM05D000275 ORTHO05D003378 7.5e-09 64.3 83 38.6
MD09G1144900 Malus domestica HOM05D000275 ORTHO05D000181 9.9e-09 63.9 115 28.7
Solyc02g087910.3 Solanum lycopersicum HOM05D000275 ORTHO05D000181 1.7e-08 63.2 115 28.7
CANSAT56G1709 Cannabis sativa HOM05D000275 ORTHO05D000181 2.2e-08 62.8 103 32.0
Lalb_Chr06g0169671 Lupinus albus HOM05D000275 ORTHO05D000181 2.2e-08 62.8 111 34.2
MD17G1131400 Malus domestica HOM05D000275 ORTHO05D000181 2.2e-08 62.8 115 26.1
SGA_v2.0_scaffold153G36907 Striga asiatica HOM05D000275 ORTHO05D000181 2.2e-08 62.8 115 32.2
THA.LOC104804434 Tarenaya hassleriana HOM05D000275 ORTHO05D000181 2.2e-08 62.8 118 30.5
THA.LOC104804435 Tarenaya hassleriana HOM05D000275 ORTHO05D000181 2.2e-08 62.8 118 30.5
Aqoxy4G00405 Aquilegia oxysepala HOM05D000275 ORTHO05D000181 2.9e-08 62.4 114 28.9
Lalb_Chr07g0188491 Lupinus albus HOM05D000275 ORTHO05D003378 2.9e-08 62.4 83 37.3
Manes.01G246800 Manihot esculenta HOM05D000275 ORTHO05D000181 2.9e-08 62.4 91 35.2
Peaxi162Scf00786g00431 Petunia axillaris HOM05D000275 ORTHO05D000181 2.9e-08 62.4 118 29.7
CiPaw.02G040200 Carya illinoinensis HOM05D000275 ORTHO05D000181 3.7e-08 62.0 90 33.3
Lalb_Chr06g0169681 Lupinus albus HOM05D000275 ORTHO05D000181 3.7e-08 62.0 111 33.3
Lalb_Chr07g0188501 Lupinus albus HOM05D000275 ORTHO05D003378 3.7e-08 62.0 84 40.5
Solyc08g067530.1 Solanum lycopersicum HOM05D000275 ORTHO05D000181 3.7e-08 62.0 115 30.4
Medtr7g073100 Medicago truncatula HOM05D000275 ORTHO05D000181 4.9e-08 61.6 114 31.6
COL.COLO4_28960 Corchorus olitorius HOM05D000275 ORTHO05D000181 6.4e-08 61.2 114 29.8
Duzib268G1181 Durio zibethinus HOM05D000275 ORTHO05D000181 6.4e-08 61.2 116 28.4
TAR369G0622 Trochodendron aralioides HOM05D000275 ORTHO05D000181 6.4e-08 61.2 110 29.1
Ca_07194_v3 Cicer arietinum L. HOM05D000275 ORTHO05D000181 8.3e-08 60.8 109 26.6
Medtr7g072930 Medicago truncatula HOM05D000275 ORTHO05D000181 8.3e-08 60.8 113 31.0
CANSAT35G0820 Cannabis sativa HOM05D000275 ORTHO05D000181 1.1e-07 60.5 115 29.6
CANSAT35G1040 Cannabis sativa HOM05D000275 ORTHO05D000181 1.1e-07 60.5 115 29.6
CANSAT54G1314 Cannabis sativa HOM05D000275 ORTHO05D000181 1.1e-07 60.5 78 34.6
COL.COLO4_23388 Corchorus olitorius HOM05D000275 ORTHO05D000181 1.1e-07 60.5 114 30.7
Gohir.A13G235300 Gossypium hirsutum HOM05D000275 ORTHO05D000181 1.1e-07 60.5 91 33.0
Gorai.004G071100 Gossypium raimondii HOM05D000275 ORTHO05D000181 1.1e-07 60.5 113 25.7
Sopen08g021470 Solanum pennellii HOM05D000275 ORTHO05D000181 1.1e-07 60.5 115 30.4
AUR62029718 Chenopodium quinoa HOM05D000275 ORTHO05D000181 1.4e-07 60.1 93 32.3
AUR62029719 Chenopodium quinoa HOM05D000275 ORTHO05D000181 1.4e-07 60.1 93 32.3
COL.COLO4_12457 Corchorus olitorius HOM05D000275 ORTHO05D000181 1.4e-07 60.1 114 29.8
Gohir.D08G068000 Gossypium hirsutum HOM05D000275 ORTHO05D000181 1.4e-07 60.1 113 25.7
Hma1.2p1_0295F.1_g116650 Hydrangea macrophylla HOM05D000275 ORTHO05D000181 1.4e-07 60.1 94 33.0
PGSC0003DMG400016102 Solanum tuberosum HOM05D000275 ORTHO05D000181 1.4e-07 60.1 108 27.8
Manes.02G187100 Manihot esculenta HOM05D000275 ORTHO05D000181 1.9e-07 59.7 106 29.2
Atru.chr8.2399 Acer truncatum HOM05D000275 ORTHO05D000181 2.4e-07 59.3 109 31.2
Dinv33752 Davidia involucrata HOM05D000275 ORTHO05D000181 2.4e-07 59.3 113 29.2
Nn5g26861 Nelumbo nucifera HOM05D000275 ORTHO05D000181 2.4e-07 59.3 111 29.7
Os11g0115100 Oryza sativa ssp. japonica HOM05D000275 ORTHO05D000181 2.4e-07 59.3 107 28.0
Os12g0114800 Oryza sativa ssp. japonica HOM05D000275 ORTHO05D000181 2.4e-07 59.3 107 28.0
Prupe.2G187100 Prunus persica HOM05D000275 ORTHO05D000181 2.4e-07 59.3 112 33.9
THA.LOC104819466 Tarenaya hassleriana HOM05D000275 ORTHO05D000181 2.4e-07 59.3 115 27.0
Medtr7g073060 Medicago truncatula HOM05D000275 ORTHO05D000181 3.2e-07 58.9 114 30.7
Phvul.006G112211 Phaseolus vulgaris HOM05D000275 ORTHO05D000181 3.2e-07 58.9 97 30.9
PGR031G0583 Punica granatum HOM05D000275 ORTHO05D000181 3.2e-07 58.9 108 33.3
Lj5g0006148 Lotus japonicus HOM05D000275 ORTHO05D000181 4.1e-07 58.5 114 31.6
TAR636G0501 Trochodendron aralioides HOM05D000275 ORTHO05D000181 4.1e-07 58.5 100 32.0
Aqoxy4G00389 Aquilegia oxysepala HOM05D000275 ORTHO05D000181 5.4e-07 58.2 114 28.9
AUR62006384 Chenopodium quinoa HOM05D000275 ORTHO05D000181 5.4e-07 58.2 108 29.6
COL.COLO4_15105 Corchorus olitorius HOM05D000275 ORTHO05D000181 5.4e-07 58.2 93 29.0
Glyma.09G275500 Glycine max HOM05D000275 ORTHO05D000181 5.4e-07 58.2 110 30.9
Lj1g0027523 Lotus japonicus HOM05D000275 ORTHO05D000181 5.4e-07 58.2 103 28.2
Manes.05G053800 Manihot esculenta HOM05D000275 ORTHO05D000181 5.4e-07 58.2 107 32.7
Manes.05G054000 Manihot esculenta HOM05D000275 ORTHO05D000181 5.4e-07 58.2 107 31.8
Actinidia22157 Actinidia chinensis HOM05D000275 ORTHO05D000181 7.1e-07 57.8 98 30.6
arahy.Tifrunner.gnm1.ann1.943YTE Arachis hypogaea HOM05D000275 ORTHO05D000181 7.1e-07 57.8 93 30.1
Potri.014G098000 Populus trichocarpa HOM05D000275 ORTHO05D000181 7.1e-07 57.8 117 29.1
Sopen02g032630 Solanum pennellii HOM05D000275 ORTHO05D000181 7.1e-07 57.8 102 28.4
Cpa.g.sc9.341 Carica papaya HOM05D000275 ORTHO05D000181 9.2e-07 57.4 113 27.4
Cpa.g.sc9.342 Carica papaya HOM05D000275 ORTHO05D000181 9.2e-07 57.4 105 26.7
Cpa.g.sc9.343 Carica papaya HOM05D000275 ORTHO05D000181 9.2e-07 57.4 115 25.2
Cpa.g.sc9.347 Carica papaya HOM05D000275 ORTHO05D000181 9.2e-07 57.4 116 28.4
Cpa.g.sc9.350 Carica papaya HOM05D000275 ORTHO05D000181 9.2e-07 57.4 114 28.9
Ciclev10010357m.g Citrus clementina HOM05D000275 ORTHO05D000181 9.2e-07 57.4 110 28.2
FAN05G0531 Fragaria x ananassa HOM05D000275 ORTHO05D000181 9.2e-07 57.4 92 31.5
FAN05G4904 Fragaria x ananassa HOM05D000275 ORTHO05D000181 9.2e-07 57.4 92 31.5
Hma1.2p1_0674F.1_g201640 Hydrangea macrophylla HOM05D000275 ORTHO05D000181 9.2e-07 57.4 114 27.2
Lj5g0008467 Lotus japonicus HOM05D000275 ORTHO05D000181 9.2e-07 57.4 113 31.9
Psat7g234080 Pisum sativum HOM05D000275 ORTHO05D000181 9.2e-07 57.4 115 27.8
PGSC0003DMG400016105 Solanum tuberosum HOM05D000275 ORTHO05D000181 9.2e-07 57.4 96 31.2
ATR0765G001 Amborella trichopoda HOM05D000275 ORTHO05D000181 1.2e-06 57.0 79 35.4
Ca_29546_v3 Cicer arietinum L. HOM05D000275 ORTHO05D000181 1.2e-06 57.0 103 31.1
MBI02_g15133_MAGBIO Magnolia biondii HOM05D000275 ORTHO05D000181 1.2e-06 57.0 103 28.2
Ciclev10017229m.g Citrus clementina HOM05D000275 ORTHO05D000181 1.6e-06 56.6 115 28.7
DCAR_009799 Daucus carota HOM05D000275 ORTHO05D000181 1.6e-06 56.6 93 26.9
Nitab4.5_0006615g0020 Nicotiana tabacum HOM05D000275 ORTHO05D000181 1.6e-06 56.6 114 28.9
Solyc08g067540.1 Solanum lycopersicum HOM05D000275 ORTHO05D000181 1.6e-06 56.6 115 28.7
arahy.Tifrunner.gnm1.ann1.L8Z3CA Arachis hypogaea HOM05D000275 ORTHO05D000181 2.1e-06 56.2 89 31.5
EL10Ac7g17082 Beta vulgaris HOM05D000275 ORTHO05D000181 2.1e-06 56.2 89 29.2
CAN.G62.7 Capsicum annuum HOM05D000275 ORTHO05D000181 2.1e-06 56.2 106 28.3
Nn1g08527 Nelumbo nucifera HOM05D000275 ORTHO05D000181 2.1e-06 56.2 108 29.6
Nitab4.5_0000564g0110 Nicotiana tabacum HOM05D000275 ORTHO05D000181 2.1e-06 56.2 115 30.4
PSO063G5480 Papaver somniferum HOM05D000275 ORTHO05D000181 2.1e-06 56.2 109 24.8
PSO407G0041 Papaver somniferum HOM05D000275 ORTHO05D000181 2.1e-06 56.2 103 28.2
PSO832G2396 Papaver somniferum HOM05D000275 ORTHO05D000181 2.1e-06 56.2 109 24.8
Peaxi162Scf00129g00232 Petunia axillaris HOM05D000275 ORTHO05D000181 2.1e-06 56.2 105 26.7
Psat0s1251g0040 Pisum sativum HOM05D000275 ORTHO05D000181 2.1e-06 56.2 89 29.2
Psat3g119560 Pisum sativum HOM05D000275 ORTHO05D000181 2.1e-06 56.2 89 29.2
PGSC0003DMG400044985 Solanum tuberosum HOM05D000275 ORTHO05D000181 2.1e-06 56.2 101 32.7
CANSAT35G1608 Cannabis sativa HOM05D000275 ORTHO05D000181 2.7e-06 55.8 104 32.7
Hma1.2p1_0674F.1_g201620 Hydrangea macrophylla HOM05D000275 ORTHO05D000181 2.7e-06 55.8 104 26.0
Lsat_1_v5_gn_5_152421 Lactuca sativa HOM05D000275 ORTHO05D000181 2.7e-06 55.8 100 32.0
Manes.05G053700 Manihot esculenta HOM05D000275 ORTHO05D000181 2.7e-06 55.8 113 31.0
Medtr7g073030 Medicago truncatula HOM05D000275 ORTHO05D000181 2.7e-06 55.8 98 31.6
PSO170G2327 Papaver somniferum HOM05D000275 ORTHO05D000181 2.7e-06 55.8 112 29.5
Prupe.4G217000 Prunus persica HOM05D000275 ORTHO05D003378 2.7e-06 55.8 98 27.6
ATR0213G029 Amborella trichopoda HOM05D000275 ORTHO05D000181 3.5e-06 55.5 79 34.2
arahy.Tifrunner.gnm1.ann1.RH0ZME Arachis hypogaea HOM05D000275 ORTHO05D000181 3.5e-06 55.5 114 28.1
A03p21370 Brassica napus HOM05D000275 ORTHO05D000181 3.5e-06 55.5 107 30.8
Ca_07200_v3 Cicer arietinum L. HOM05D000275 ORTHO05D000181 3.5e-06 55.5 109 24.8
Medtr7g073150 Medicago truncatula HOM05D000275 ORTHO05D000181 3.5e-06 55.5 119 29.4
PGSC0003DMG400001322 Solanum tuberosum HOM05D000275 ORTHO05D000181 3.5e-06 55.5 91 28.6
TWI59G0131 Tripterygium wilfordii HOM05D000275 ORTHO05D000181 3.5e-06 55.5 107 27.1
VMungo0540G1752 Vigna mungo HOM05D000275 ORTHO05D000181 3.5e-06 55.5 94 30.9
Atru.chr5.658 Acer truncatum HOM05D000275 ORTHO05D000181 4.6e-06 55.1 102 28.4
arahy.Tifrunner.gnm1.ann1.XQ75JC Arachis hypogaea HOM05D000275 ORTHO05D000181 4.6e-06 55.1 116 27.6
EL10Ac1g02050 Beta vulgaris HOM05D000275 ORTHO05D000181 4.6e-06 55.1 99 31.3
CANSAT35G1080 Cannabis sativa HOM05D000275 ORTHO05D000181 4.6e-06 55.1 110 29.1
Cpa.g.sc9.345 Carica papaya HOM05D000275 ORTHO05D000181 4.6e-06 55.1 115 26.1
Ciclev10033516m.g Citrus clementina HOM05D000275 ORTHO05D000181 4.6e-06 55.1 110 26.4
Lj3g0010875 Lotus japonicus HOM05D000275 ORTHO05D000181 4.6e-06 55.1 100 28.0
Nitab4.5_0006615g0010 Nicotiana tabacum HOM05D000275 ORTHO05D000181 4.6e-06 55.1 114 28.1
Sopen06g024080 Solanum pennellii HOM05D000275 ORTHO05D000181 4.6e-06 55.1 101 32.7
CAN.G986.13 Capsicum annuum HOM05D000275 ORTHO05D000181 6.0e-06 54.7 122 24.6
Cpa.g.sc9.340 Carica papaya HOM05D000275 ORTHO05D000181 6.0e-06 54.7 108 26.9
FAN09G2966 Fragaria x ananassa HOM05D000275 ORTHO05D000181 6.0e-06 54.7 92 30.4
Peaxi162Scf00435g00041 Petunia axillaris HOM05D000275 ORTHO05D000181 6.0e-06 54.7 88 30.7
QL07p032189 Quercus lobata HOM05D000275 ORTHO05D000181 6.0e-06 54.7 115 30.4
ATR1127G082 Amborella trichopoda HOM05D000275 ORTHO05D000181 7.8e-06 54.3 104 30.8
CAN.G206.145 Capsicum annuum HOM05D000275 ORTHO05D000181 7.8e-06 54.3 113 25.7
Dinv43624 Davidia involucrata HOM05D000275 ORTHO05D000181 7.8e-06 54.3 114 26.3
ECA236G3396 Erigeron canadensis HOM05D000275 ORTHO05D000181 7.8e-06 54.3 116 27.6
Migut.J00046 Erythranthe guttata HOM05D000275 ORTHO05D000181 7.8e-06 54.3 105 30.5
Peaxi162Scf00775g00022 Petunia axillaris HOM05D000275 ORTHO05D000181 7.8e-06 54.3 88 30.7
QL09p053525 Quercus lobata HOM05D000275 ORTHO05D000181 7.8e-06 54.3 104 30.8


User provided reference genes

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