Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.008G198000 Phaseolus vulgaris HOM05D011707 ORTHO05D000181 1.3e-57 226.1 112 100.0
Phvul.001G062200 Phaseolus vulgaris HOM05D011707 ORTHO05D000181 1.3e-55 219.5 110 98.2
Phvul.008G197914 Phaseolus vulgaris HOM05D011707 ORTHO05D000181 2.8e-55 218.4 112 97.3
Phvul.001G062500 Phaseolus vulgaris HOM05D011707 ORTHO05D000181 4.8e-55 217.6 112 96.4
Phvul.008G198200 Phaseolus vulgaris HOM05D011707 ORTHO05D000181 5.8e-53 210.7 111 94.6
Phvul.001G062400 Phaseolus vulgaris HOM05D011707 ORTHO05D000181 2.9e-52 208.4 110 93.6
Phvul.008G198100 Phaseolus vulgaris HOM05D011707 ORTHO05D000181 2.9e-44 181.8 112 84.8
Phvul.008G198500 Phaseolus vulgaris HOM05D000275 ORTHO05D000181 1.4e-33 146.4 116 62.1
Phvul.001G062300 Phaseolus vulgaris HOM05D000275 ORTHO05D000181 3.0e-33 145.2 116 61.2
Phvul.008G198414 Phaseolus vulgaris HOM05D000275 ORTHO05D000181 3.9e-33 144.8 116 61.2
Phvul.008G198300 Phaseolus vulgaris HOM05D000275 ORTHO05D000181 1.5e-32 142.9 116 59.5
Phvul.008G197700 Phaseolus vulgaris HOM05D000275 ORTHO05D000181 4.8e-31 137.9 117 57.3
Phvul.008G197800 Phaseolus vulgaris HOM05D000275 ORTHO05D000181 1.4e-30 136.3 118 57.6
Phvul.008G198900 Phaseolus vulgaris HOM05D000275 ORTHO05D000181 2.4e-30 135.6 117 58.1
Phvul.008G198700 Phaseolus vulgaris HOM05D000275 ORTHO05D000181 1.7e-28 129.4 116 56.9
Phvul.008G198400 Phaseolus vulgaris HOM05D000275 ORTHO05D000181 2.2e-28 129.0 118 55.1
VMungo0068G0001 Vigna mungo HOM05D011707 ORTHO05D000181 9.4e-27 123.6 112 54.5
Phvul.001G062350 Phaseolus vulgaris HOM05D011707 ORTHO05D000181 1.0e-25 120.2 116 55.2
VMungo0647G1529 Vigna mungo HOM05D011707 ORTHO05D000181 1.1e-24 116.7 111 48.6
Phvul.008G198600 Phaseolus vulgaris HOM05D000275 ORTHO05D000181 4.8e-23 111.3 94 54.3
Phvul.008G198800 Phaseolus vulgaris HOM05D011707 ORTHO05D000181 3.5e-21 105.1 94 50.0
VMungo0647G2571 Vigna mungo HOM05D011707 ORTHO05D000181 1.3e-20 103.2 118 48.3
VMungo0647G2261 Vigna mungo HOM05D011707 ORTHO05D000181 2.2e-20 102.4 103 50.5
Glyma.14G032800 Glycine max HOM05D000275 ORTHO05D000181 8.8e-17 90.5 104 44.2
VMungo0647G1858 Vigna mungo HOM05D011707 ORTHO05D000181 1.2e-16 90.1 104 47.1
Glyma.09G055000 Glycine max HOM05D000275 ORTHO05D000181 2.8e-15 85.5 104 39.4
Glyma.09G055100 Glycine max HOM05D000275 ORTHO05D000181 2.8e-15 85.5 104 39.4
VMungo0647G0074 Vigna mungo HOM05D000275 ORTHO05D000181 1.2e-13 80.1 107 35.5
VMungo1292G0001 Vigna mungo HOM05D000275 ORTHO05D000181 1.6e-13 79.7 105 36.2
Lalb_Chr17g0348091 Lupinus albus HOM05D000275 ORTHO05D000181 1.7e-12 76.3 116 38.8
Lalb_Chr06g0169701 Lupinus albus HOM05D000275 ORTHO05D000181 6.1e-10 67.8 116 32.8
RcHm_v2.0_Chr1g0347601 Rosa chinensis HOM05D000275 ORTHO05D000181 3.0e-09 65.5 89 32.6
CANSAT56G2214 Cannabis sativa HOM05D000275 ORTHO05D000181 1.2e-08 63.5 97 32.0
Lalb_Chr06g0169691 Lupinus albus HOM05D000275 ORTHO05D000181 1.5e-08 63.2 106 35.8
Duzib268G1181 Durio zibethinus HOM05D000275 ORTHO05D000181 2.6e-08 62.4 116 28.4
Os11g0115100 Oryza sativa ssp. japonica HOM05D000275 ORTHO05D000181 4.4e-08 61.6 109 29.4
Os12g0114800 Oryza sativa ssp. japonica HOM05D000275 ORTHO05D000181 4.4e-08 61.6 109 29.4
Lalb_Chr06g0169671 Lupinus albus HOM05D000275 ORTHO05D000181 5.7e-08 61.2 113 34.5
Medtr7g073100 Medicago truncatula HOM05D000275 ORTHO05D000181 5.7e-08 61.2 115 31.3
CANSAT56G1709 Cannabis sativa HOM05D000275 ORTHO05D000181 7.5e-08 60.8 107 30.8
Manes.02G187100 Manihot esculenta HOM05D000275 ORTHO05D000181 7.5e-08 60.8 103 30.1
Peaxi162Scf00786g00431 Petunia axillaris HOM05D000275 ORTHO05D000181 7.5e-08 60.8 119 30.3
Sc01g0002760 Simmondsia chinensis HOM05D000275 ORTHO05D000181 7.5e-08 60.8 110 35.5
Solyc02g087910.3 Solanum lycopersicum HOM05D000275 ORTHO05D000181 7.5e-08 60.8 107 27.1
Lalb_Chr06g0169681 Lupinus albus HOM05D000275 ORTHO05D000181 9.8e-08 60.5 113 33.6
Glyma.03G257200 Glycine max HOM05D000275 ORTHO05D000181 1.7e-07 59.7 97 28.9
Manes.01G246800 Manihot esculenta HOM05D000275 ORTHO05D000181 1.7e-07 59.7 109 32.1
Manes.05G053800 Manihot esculenta HOM05D000275 ORTHO05D000181 1.7e-07 59.7 108 29.6
Medtr7g073060 Medicago truncatula HOM05D000275 ORTHO05D000181 1.7e-07 59.7 115 31.3
SGA_v2.0_scaffold153G36907 Striga asiatica HOM05D000275 ORTHO05D000181 1.7e-07 59.7 110 29.1
Cpa.g.sc9.342 Carica papaya HOM05D000275 ORTHO05D000181 2.2e-07 59.3 101 30.7
Lalb_Chr07g0188491 Lupinus albus HOM05D000275 ORTHO05D003378 2.2e-07 59.3 102 32.4
Manes.05G054000 Manihot esculenta HOM05D000275 ORTHO05D000181 2.2e-07 59.3 110 29.1
Peaxi162Scf00435g00041 Petunia axillaris HOM05D000275 ORTHO05D000181 2.2e-07 59.3 92 32.6
Solyc08g067530.1 Solanum lycopersicum HOM05D000275 ORTHO05D000181 2.2e-07 59.3 107 28.0
CiPaw.02G040200 Carya illinoinensis HOM05D000275 ORTHO05D000181 2.8e-07 58.9 90 32.2
Hma1.2p1_0295F.1_g116650 Hydrangea macrophylla HOM05D000275 ORTHO05D000181 2.8e-07 58.9 100 32.0
Peaxi162Scf00775g00022 Petunia axillaris HOM05D000275 ORTHO05D000181 2.8e-07 58.9 92 32.6
CANSAT35G0820 Cannabis sativa HOM05D000275 ORTHO05D000181 3.7e-07 58.5 110 31.8
CANSAT35G1040 Cannabis sativa HOM05D000275 ORTHO05D000181 3.7e-07 58.5 110 31.8
COL.COLO4_28960 Corchorus olitorius HOM05D000275 ORTHO05D000181 3.7e-07 58.5 118 28.8
PSO063G5480 Papaver somniferum HOM05D000275 ORTHO05D000181 3.7e-07 58.5 109 23.9
PSO832G2396 Papaver somniferum HOM05D000275 ORTHO05D000181 3.7e-07 58.5 109 23.9
DCAR_009799 Daucus carota HOM05D000275 ORTHO05D000181 4.8e-07 58.2 93 30.1
Glyma.09G275500 Glycine max HOM05D000275 ORTHO05D000181 4.8e-07 58.2 109 29.4
Lalb_Chr07g0188501 Lupinus albus HOM05D000275 ORTHO05D003378 4.8e-07 58.2 105 34.3
Potri.014G098000 Populus trichocarpa HOM05D000275 ORTHO05D000181 4.8e-07 58.2 107 29.0
TAR369G0622 Trochodendron aralioides HOM05D000275 ORTHO05D000181 4.8e-07 58.2 110 29.1
CANSAT54G1314 Cannabis sativa HOM05D000275 ORTHO05D000181 6.3e-07 57.8 105 30.5
Sopen08g021470 Solanum pennellii HOM05D000275 ORTHO05D000181 6.3e-07 57.8 107 28.0
COL.COLO4_12457 Corchorus olitorius HOM05D000275 ORTHO05D000181 8.3e-07 57.4 118 28.8
Manes.05G053700 Manihot esculenta HOM05D000275 ORTHO05D000181 8.3e-07 57.4 105 28.6
PGSC0003DMG400016102 Solanum tuberosum HOM05D000275 ORTHO05D000181 8.3e-07 57.4 104 26.0
COL.COLO4_23388 Corchorus olitorius HOM05D000275 ORTHO05D000181 1.1e-06 57.0 118 28.8
MD17G1131400 Malus domestica HOM05D000275 ORTHO05D000181 1.1e-06 57.0 118 26.3
Manes.02G010200 Manihot esculenta HOM05D000275 ORTHO05D000181 1.1e-06 57.0 108 28.7
Prupe.2G187100 Prunus persica HOM05D000275 ORTHO05D000181 1.1e-06 57.0 111 36.0
THA.LOC104819466 Tarenaya hassleriana HOM05D000275 ORTHO05D000181 1.1e-06 57.0 110 25.5
Actinidia22157 Actinidia chinensis HOM05D000275 ORTHO05D000181 1.8e-06 56.2 107 29.9
Cpa.g.sc9.341 Carica papaya HOM05D000275 ORTHO05D000181 1.8e-06 56.2 115 28.7
CiPaw.09G100900 Carya illinoinensis HOM05D006508 ORTHO05D003378 1.8e-06 56.2 96 27.1
Medtr7g073030 Medicago truncatula HOM05D000275 ORTHO05D000181 1.8e-06 56.2 99 32.3
Peaxi162Scf00001g06113 Petunia axillaris HOM05D000275 ORTHO05D000181 1.8e-06 56.2 116 28.4
TAR627G0711 Trochodendron aralioides HOM05D000275 ORTHO05D000181 1.8e-06 56.2 116 27.6
TAR627G1030 Trochodendron aralioides HOM05D000275 ORTHO05D000181 1.8e-06 56.2 116 27.6
arahy.Tifrunner.gnm1.ann1.RH0ZME Arachis hypogaea HOM05D000275 ORTHO05D000181 2.4e-06 55.8 124 26.6
AUR62006384 Chenopodium quinoa HOM05D000275 ORTHO05D000181 2.4e-06 55.8 110 29.1
Ca_29546_v3 Cicer arietinum L. HOM05D000275 ORTHO05D000181 2.4e-06 55.8 103 30.1
Sopen02g032630 Solanum pennellii HOM05D000275 ORTHO05D000181 2.4e-06 55.8 94 26.6
Ciclev10033516m.g Citrus clementina HOM05D000275 ORTHO05D000181 3.1e-06 55.5 113 26.5
COL.COLO4_15105 Corchorus olitorius HOM05D000275 ORTHO05D000181 3.1e-06 55.5 93 28.0
Haze_25363 Corylus avellana HOM05D033107 ORTHO05D000181 3.1e-06 55.5 97 30.9
Migut.J00046 Erythranthe guttata HOM05D000275 ORTHO05D000181 3.1e-06 55.5 105 31.4
Lj1g0027523 Lotus japonicus HOM05D000275 ORTHO05D000181 3.1e-06 55.5 116 25.9
CANSAT35G0430 Cannabis sativa HOM05D000275 ORTHO05D000181 4.1e-06 55.1 103 29.1
Gorai.004G071100 Gossypium raimondii HOM05D000275 ORTHO05D000181 4.1e-06 55.1 115 25.2
MBI02_g15133_MAGBIO Magnolia biondii HOM05D000275 ORTHO05D000181 4.1e-06 55.1 107 27.1
PSO407G0041 Papaver somniferum HOM05D000275 ORTHO05D000181 4.1e-06 55.1 115 26.1
Potri.011G021900 Populus trichocarpa HOM05D000275 ORTHO05D003378 4.1e-06 55.1 81 34.6
Cc02_g25070 Coffea canephora HOM05D000275 ORTHO05D000181 5.4e-06 54.7 116 27.6
Gohir.D08G068000 Gossypium hirsutum HOM05D000275 ORTHO05D000181 5.4e-06 54.7 115 25.2
Medtr7g072930 Medicago truncatula HOM05D000275 ORTHO05D000181 5.4e-06 54.7 115 30.4
Atru.chr8.2399 Acer truncatum HOM05D000275 ORTHO05D000181 7.0e-06 54.3 110 28.2
Lsat_1_v5_gn_5_152421 Lactuca sativa HOM05D000275 ORTHO05D000181 7.0e-06 54.3 93 31.2
Actinidia22158 Actinidia chinensis HOM05D000275 ORTHO05D000181 9.1e-06 53.9 64 32.8
CAN.G206.145 Capsicum annuum HOM05D000275 ORTHO05D000181 9.1e-06 53.9 105 25.7
Ca_07194_v3 Cicer arietinum L. HOM05D000275 ORTHO05D000181 9.1e-06 53.9 115 24.3
Nn5g26861 Nelumbo nucifera HOM05D000275 ORTHO05D000181 9.1e-06 53.9 112 27.7
Phvul.006G112211 Phaseolus vulgaris HOM05D000275 ORTHO05D000181 9.1e-06 53.9 97 28.9


User provided reference genes

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