Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.008G196000 Phaseolus vulgaris HOM05D007512 ORTHO05D009524 8.1e-103 377.1 193 100.0
VMungo0647G1345 Vigna mungo HOM05D007512 ORTHO05D009524 3.2e-91 338.6 193 90.2
Glyma.02G283200 Glycine max HOM05D007512 ORTHO05D009524 5.8e-85 317.8 193 84.5
Psat2g017680 Pisum sativum HOM05D007512 ORTHO05D009524 2.3e-73 279.3 187 73.8
LjContig00049g0018887 Lotus japonicus HOM05D007512 ORTHO05D009524 3.0e-73 278.9 196 73.5
Ca_06252_v3 Cicer arietinum L. HOM05D007512 ORTHO05D009524 8.8e-73 277.3 182 76.9
Lalb_Chr11g0069491 Lupinus albus HOM05D007512 ORTHO05D009524 2.0e-69 266.2 187 73.3
TPR.G8778 Trifolium pratense HOM05D007512 ORTHO05D009524 4.7e-66 255.0 186 70.4
Medtr5g090740 Medicago truncatula HOM05D007512 ORTHO05D009524 1.1e-64 250.4 187 67.4
Cfa005459 Carpinus fangiana HOM05D007512 ORTHO05D009524 1.8e-62 243.0 205 62.0
Haze_01852 Corylus avellana HOM05D007512 ORTHO05D009524 1.8e-62 243.0 199 63.3
arahy.Tifrunner.gnm1.ann1.EFEG4J Arachis hypogaea HOM05D007512 ORTHO05D009524 6.5e-60 234.6 193 62.2
QL08p045474 Quercus lobata HOM05D007512 ORTHO05D009524 1.1e-59 233.8 185 64.3
GSVIVG01020824001 Vitis vinifera HOM05D007512 ORTHO05D009524 1.9e-59 233.0 186 65.1
CSS0030250 Camellia sinensis var. sinensis HOM05D007512 ORTHO05D009524 3.6e-58 228.8 182 63.7
MELO3C022965.2 Cucumis melo HOM05D007512 ORTHO05D009524 6.1e-58 228.0 184 60.9
Sed0022455 Sechium edule HOM05D007512 ORTHO05D009524 6.1e-58 228.0 186 59.7
CsaV3_4G032050 Cucumis sativus L. HOM05D007512 ORTHO05D009524 1.0e-57 227.3 184 60.3
ClCG11G016580 Citrullus lanatus HOM05D007512 ORTHO05D009524 1.4e-57 226.9 184 59.8
CiPaw.09G218400 Carya illinoinensis HOM05D007512 ORTHO05D009524 5.2e-57 224.9 197 59.9
RcHm_v2.0_Chr2g0152451 Rosa chinensis HOM05D007512 ORTHO05D009524 2.0e-56 223.0 184 62.0
Cpa.g.sc53.33 Carica papaya HOM05D007512 ORTHO05D009524 5.7e-56 221.5 188 61.2
Manes.12G132100 Manihot esculenta HOM05D007512 ORTHO05D009524 5.7e-56 221.5 190 59.5
Prupe.3G178900 Prunus persica HOM05D007512 ORTHO05D009524 5.7e-56 221.5 185 59.5
Sabra02G0045700 Salix brachista HOM05D007512 ORTHO05D009524 5.7e-56 221.5 184 59.8
Potri.002G056400 Populus trichocarpa HOM05D007512 ORTHO05D009524 1.7e-55 219.9 184 59.8
Nn7g38052 Nelumbo nucifera HOM05D007512 ORTHO05D009524 2.2e-55 219.5 189 60.3
Ciclev10032522m.g Citrus clementina HOM05D007512 ORTHO05D009524 4.8e-55 218.4 202 56.9
Nn7g38060 Nelumbo nucifera HOM05D007512 ORTHO05D009524 8.2e-55 217.6 189 59.8
Rhsim12G0013200 Rhododendron simsii HOM05D007512 ORTHO05D009524 5.3e-54 214.9 186 59.1
Sc23g0003420 Simmondsia chinensis HOM05D007512 ORTHO05D009524 2.6e-53 212.6 179 59.8
CAN.G946.8 Capsicum annuum HOM05D007512 ORTHO05D009524 1.3e-52 210.3 181 56.9
FvH4_6g38852 Fragaria vesca HOM05D007512 ORTHO05D009524 1.3e-52 210.3 179 59.8
TAR626G1484 Trochodendron aralioides HOM05D007512 ORTHO05D009524 1.3e-52 210.3 191 59.2
Nitab4.5_0007814g0010 Nicotiana tabacum HOM05D007512 ORTHO05D009524 1.7e-52 209.9 184 56.5
Peaxi162Scf00359g00113 Petunia axillaris HOM05D007512 ORTHO05D009524 1.7e-52 209.9 184 59.2
Nitab4.5_0001552g0120 Nicotiana tabacum HOM05D007512 ORTHO05D009524 3.8e-52 208.8 184 58.2
Lj1C588G3 Lonicera japonica HOM05D007512 ORTHO05D009524 1.5e-51 206.8 182 59.3
Eucgr.A02034 Eucalyptus grandis HOM05D007512 ORTHO05D009524 1.9e-51 206.5 161 64.0
Gohir.A11G061700 Gossypium hirsutum HOM05D007512 ORTHO05D009524 7.2e-51 204.5 178 58.4
Gorai.007G071100 Gossypium raimondii HOM05D007512 ORTHO05D009524 9.4e-51 204.1 178 58.4
Migut.J01325 Erythranthe guttata HOM05D007512 ORTHO05D009524 2.1e-50 203.0 188 56.4
Solyc07g044970.1 Solanum lycopersicum HOM05D007512 ORTHO05D009524 2.1e-50 203.0 184 56.0
PGSC0003DMG400045865 Solanum tuberosum HOM05D007512 ORTHO05D009524 2.1e-50 203.0 193 54.4
PGSC0003DMG402000923 Solanum tuberosum HOM05D007512 ORTHO05D009524 2.1e-50 203.0 193 54.4
CSS0045166 Camellia sinensis var. sinensis HOM05D007512 ORTHO05D009524 2.7e-50 202.6 183 59.6
Gohir.D11G065600 Gossypium hirsutum HOM05D007512 ORTHO05D009524 3.6e-50 202.2 178 57.9
Duzib147G0049 Durio zibethinus HOM05D007512 ORTHO05D009524 6.1e-50 201.4 183 56.8
Zm00001eb300410 Zea mays HOM05D007512 ORTHO05D009524 1.0e-49 200.7 188 56.4
AUR62004262 Chenopodium quinoa HOM05D007512 ORTHO05D009524 1.4e-49 200.3 185 54.6
MBI18_g45404_MAGBIO Magnolia biondii HOM05D007512 ORTHO05D009524 3.0e-49 199.1 183 55.2
Sopen07g023500 Solanum pennellii HOM05D007512 ORTHO05D009524 4.0e-49 198.7 184 54.9
Aqoxy1G01494 Aquilegia oxysepala HOM05D007512 ORTHO05D009524 6.8e-49 198.0 183 55.7
Gohir.D11G065833 Gossypium hirsutum HOM05D007512 ORTHO05D009524 8.8e-49 197.6 168 60.1
Thecc.01G167000 Theobroma cacao HOM05D007512 ORTHO05D009524 8.8e-49 197.6 176 57.4
TWI14G0908 Tripterygium wilfordii HOM05D007512 ORTHO05D009524 8.8e-49 197.6 194 54.1
Ah.05g175540 Amaranthus hybridus HOM05D007512 ORTHO05D009524 2.6e-48 196.1 188 53.7
ECA246G3016 Erigeron canadensis HOM05D007512 ORTHO05D009524 1.3e-47 193.7 185 56.8
Gohir.A11G061633 Gossypium hirsutum HOM05D007512 ORTHO05D009524 1.3e-47 193.7 178 55.6
AUR62042750 Chenopodium quinoa HOM05D007512 ORTHO05D009524 2.8e-47 192.6 176 54.5
Oeu021245.2 Olea europaea HOM05D007512 ORTHO05D009524 2.8e-47 192.6 181 55.2
HPP92_026664 Vanilla planifolia HOM05D007512 ORTHO05D009524 2.8e-47 192.6 185 54.6
unitig_747.g21446 Utricularia gibba HOM05D007512 ORTHO05D009524 3.7e-47 192.2 180 51.1
SGA_v2.0_scaffold45G17047 Striga asiatica HOM05D007512 ORTHO05D009524 7.0e-46 188.0 191 51.8
Os07g0160300 Oryza sativa ssp. japonica HOM05D007512 ORTHO05D009524 9.1e-46 187.6 194 53.6
COL.COLO4_29884 Corchorus olitorius HOM05D007512 ORTHO05D009524 2.7e-45 186.0 184 53.3
HanXRQChr05g0157121 Helianthus annuus HOM05D007512 ORTHO05D009524 2.7e-45 186.0 186 55.4
Dinv27197 Davidia involucrata HOM05D007512 ORTHO05D009524 5.9e-45 184.9 170 58.2
ATR0763G176 Amborella trichopoda HOM05D007512 ORTHO05D009524 8.5e-44 181.0 206 50.0
MBI18_g43440_MAGBIO Magnolia biondii HOM05D007512 ORTHO05D009524 1.2e-42 177.2 183 51.9
CAN.G358.11 Capsicum annuum HOM05D007512 ORTHO05D009524 2.6e-40 169.5 196 48.0
SEGI_32907 Sequoiadendron giganteum HOM05D007512 ORTHO05D009524 8.3e-39 164.5 175 48.6
AagrBONN_evm.TU.Sc2ySwM_368.3309 Anthoceros agrestis HOM05D007512 ORTHO05D009524 7.7e-37 157.9 184 45.7
Actinidia25705 Actinidia chinensis HOM05D007512 ORTHO05D009524 3.4e-32 142.5 170 49.4
Actinidia18710 Actinidia chinensis HOM05D007512 ORTHO05D009524 4.9e-31 138.7 178 42.7
Mapoly0032s0087 Marchantia polymorpha HOM05D007512 ORTHO05D009524 1.6e-29 133.7 208 39.4
Lsat_1_v5_gn_5_21320 Lactuca sativa HOM05D007512 ORTHO05D009524 1.1e-27 127.5 175 41.7
Nitab4.5_0000241g0240 Nicotiana tabacum HOM05D007512 ORTHO05D009524 1.5e-27 127.1 185 40.0
Actinidia25706 Actinidia chinensis HOM05D007512 ORTHO05D009524 2.5e-27 126.3 182 44.5
Actinidia24468 Actinidia chinensis HOM05D007512 ORTHO05D009524 3.3e-27 125.9 178 40.4
Atru.chr6.2019 Acer truncatum HOM05D007512 ORTHO05D009524 8.9e-25 117.9 91 57.1
Ca_06242_v3 Cicer arietinum L. HOM05D007512 ORTHO05D009524 3.4e-24 115.9 96 64.6
SMO367G0698 Selaginella moellendorffii HOM05D007512 ORTHO05D009524 5.8e-24 115.2 211 33.6
Actinidia24467 Actinidia chinensis HOM05D007512 ORTHO05D009524 1.3e-23 114.0 124 50.0
Pp3c26_9780 Physcomitrium patens HOM05D007512 ORTHO05D009524 1.3e-23 114.0 245 31.0
Pp3c3_10350 Physcomitrium patens HOM05D007512 ORTHO05D009524 3.7e-23 112.5 262 28.6
PGR142G3775 Punica granatum HOM05D007512 ORTHO05D009524 1.4e-22 110.5 189 38.6
CSS0013803 Camellia sinensis var. sinensis HOM05D007512 ORTHO05D009524 1.3e-20 104.0 187 35.8
Actinidia40448 Actinidia chinensis HOM05D007512 ORTHO05D009524 1.7e-20 103.6 181 36.5
Actinidia02493 Actinidia chinensis HOM05D007512 ORTHO05D009524 1.1e-19 100.9 182 35.2
Actinidia18709 Actinidia chinensis HOM05D007512 ORTHO05D009524 1.6e-18 97.1 172 32.6
Actinidia02491 Actinidia chinensis HOM05D007512 ORTHO05D009524 6.2e-18 95.1 184 34.2
Actinidia22804 Actinidia chinensis HOM05D007512 ORTHO05D009524 8.1e-18 94.7 177 32.2
TWI36G1125 Tripterygium wilfordii HOM05D007512 ORTHO05D009524 8.9e-17 91.3 163 34.4
FAN14G4311 Fragaria x ananassa HOM05D000876 ORTHO05D000285 7.5e-16 88.2 127 42.5
FvH4_6g38850 Fragaria vesca HOM05D000876 ORTHO05D000285 2.9e-15 86.3 85 54.1
Sabra01G0030800 Salix brachista HOM05D007512 ORTHO05D009524 2.7e-13 79.7 176 34.1
Duzib177G0331 Durio zibethinus HOM05D000125 ORTHO05D020513 7.3e-11 71.6 119 39.5
Actinidia09356 Actinidia chinensis HOM05D007512 ORTHO05D009524 1.2e-10 70.9 98 40.8
CSS0000822 Camellia sinensis var. sinensis HOM05D000125 ORTHO05D009524 4.7e-10 68.9 116 37.9
COL.COLO4_13576 Corchorus olitorius HOM05D007512 ORTHO05D020513 2.6e-08 63.2 110 37.3
Actinidia14260 Actinidia chinensis HOM05D007512 ORTHO05D009524 3.4e-08 62.8 76 42.1
Sabra09G0120600 Salix brachista HOM05D000125 ORTHO05D020513 5.8e-08 62.0 175 30.9


User provided reference genes

Program Settings