Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.008G191300 Phaseolus vulgaris HOM05D006785 ORTHO05D006259 6.6e-99 364.8 304 100.0
Glyma.02G287000 Glycine max HOM05D006785 ORTHO05D006259 1.4e-69 267.3 326 70.9
VMungo0647G1995 Vigna mungo HOM05D006785 ORTHO05D006259 8.7e-59 231.5 325 60.3
Glyma.14G027900 Glycine max HOM05D006785 ORTHO05D006259 1.9e-58 230.3 326 70.9
Lalb_Chr10g0106721 Lupinus albus HOM05D006785 ORTHO05D006259 8.4e-38 161.8 327 47.1
Ca_06284_v3 Cicer arietinum L. HOM05D006785 ORTHO05D006259 1.3e-35 154.5 326 46.0
LjContig00310g0014416 Lotus japonicus HOM05D006785 ORTHO05D006259 7.4e-34 148.7 350 49.7
Medtr5g091710 Medicago truncatula HOM05D006785 ORTHO05D006259 2.2e-33 147.1 326 43.6
TPR.G12660 Trifolium pratense HOM05D006785 ORTHO05D006259 8.2e-33 145.2 327 46.8
Lalb_Chr17g0348301 Lupinus albus HOM05D006785 ORTHO05D006259 7.7e-31 138.7 314 43.6
Psat2g015800 Pisum sativum HOM05D006785 ORTHO05D006259 1.3e-30 137.9 326 50.6
Manes.01G127500 Manihot esculenta HOM05D006785 ORTHO05D006259 2.5e-29 133.7 307 41.7
ClCG02G018390 Citrullus lanatus HOM05D006785 ORTHO05D006259 1.0e-27 128.3 309 40.8
arahy.Tifrunner.gnm1.ann1.PX2Y9B Arachis hypogaea HOM05D006785 ORTHO05D006259 1.1e-26 124.8 318 41.8
TWI59G0461 Tripterygium wilfordii HOM05D006785 ORTHO05D006259 2.5e-26 123.6 308 37.7
CsaV3_6G015830 Cucumis sativus L. HOM05D006785 ORTHO05D006259 5.7e-26 122.5 309 39.5
Manes.02G084200 Manihot esculenta HOM05D006785 ORTHO05D006259 1.8e-24 117.5 329 35.9
arahy.Tifrunner.gnm1.ann1.W4MS3F Arachis hypogaea HOM05D006785 ORTHO05D006259 3.4e-23 113.2 325 41.5
Sed0020726 Sechium edule HOM05D006785 ORTHO05D006259 3.4e-23 113.2 309 40.1
MD09G1151900 Malus domestica HOM05D006785 ORTHO05D006259 3.9e-19 99.8 256 34.4
QL08p044083 Quercus lobata HOM05D006785 ORTHO05D006259 6.7e-19 99.0 323 35.6
Eucgr.A01969 Eucalyptus grandis HOM05D006785 ORTHO05D006259 5.7e-18 95.9 342 43.9
Sed0007746 Sechium edule HOM05D006785 ORTHO05D006259 2.2e-17 94.0 309 35.9
CiPaw.03G189000 Carya illinoinensis HOM05D006785 ORTHO05D006259 3.7e-17 93.2 308 42.2
CANSAT64G1891 Cannabis sativa HOM05D006785 ORTHO05D006259 6.3e-17 92.4 333 36.3
Potri.005G201400 Populus trichocarpa HOM05D006785 ORTHO05D006259 6.3e-17 92.4 239 47.7
Cfa021376 Carpinus fangiana HOM05D006785 ORTHO05D006259 2.4e-16 90.5 329 36.2
MELO3C019688.2 Cucumis melo HOM05D006785 ORTHO05D006259 3.1e-16 90.1 309 35.0
Carub.0001s0590 Capsella rubella HOM05D006785 ORTHO05D006259 4.1e-16 89.7 200 34.5
THA.LOC104800823 Tarenaya hassleriana HOM05D006785 ORTHO05D006259 4.1e-16 89.7 172 38.4
Thhalv10009835m.g Eutrema salsugineum HOM05D006785 ORTHO05D006259 1.6e-15 87.8 199 44.2
Gorai.008G098200 Gossypium raimondii HOM05D006785 ORTHO05D006259 5.9e-15 85.9 213 34.3
AT1G06530 Arabidopsis thaliana HOM05D006785 ORTHO05D006259 7.7e-15 85.5 191 36.6
Gohir.D12G068400 Gossypium hirsutum HOM05D006785 ORTHO05D006259 2.2e-14 84.0 213 34.3
CARHR006150 Cardamine hirsuta HOM05D006785 ORTHO05D006259 3.8e-14 83.2 202 35.1
arahy.Tifrunner.gnm1.ann1.SE4LXZ Arachis hypogaea HOM05D006785 ORTHO05D006259 6.5e-14 82.4 247 33.6
Gohir.A05G378800 Gossypium hirsutum HOM05D006785 ORTHO05D006259 1.5e-13 81.3 169 35.5
Haze_13495 Corylus avellana HOM05D006785 ORTHO05D006259 1.9e-13 80.9 329 35.3
Gohir.D04G036800 Gossypium hirsutum HOM05D006785 ORTHO05D006259 1.9e-13 80.9 169 36.1
Gorai.012G041600 Gossypium raimondii HOM05D006785 ORTHO05D006259 4.2e-13 79.7 169 35.5
THA.LOC104802276 Tarenaya hassleriana HOM05D006785 ORTHO05D006259 7.2e-13 79.0 255 31.4
Dinv07090 Davidia involucrata HOM05D006785 ORTHO05D006259 9.4e-13 78.6 324 28.4
MD17G1139500 Malus domestica HOM05D006785 ORTHO05D006259 9.4e-13 78.6 258 31.8
Sp4g24990 Schrenkiella parvula HOM05D006785 ORTHO05D006259 6.1e-12 75.9 327 30.0
Gohir.A12G079000 Gossypium hirsutum HOM05D006785 ORTHO05D006259 1.0e-11 75.1 203 32.5
Thecc.01G161700 Theobroma cacao HOM05D006785 ORTHO05D006259 1.0e-11 75.1 197 33.5
Lalb_Chr05g0211951 Lupinus albus HOM05D006785 ORTHO05D006259 1.4e-11 74.7 210 31.0
BraA05t19307Z Brassica rapa HOM05D006785 ORTHO05D006259 1.8e-11 74.3 249 30.1
Sp1g05290 Schrenkiella parvula HOM05D006785 ORTHO05D006259 1.8e-11 74.3 120 40.8
C04p03820 Brassica napus HOM05D006785 ORTHO05D006259 5.2e-11 72.8 246 29.7
Actinidia32516 Actinidia chinensis HOM05D006785 ORTHO05D006259 2.0e-10 70.9 336 25.9
PGR042G2728 Punica granatum HOM05D006785 ORTHO05D006259 4.4e-10 69.7 332 26.5
BolC4t22018H Brassica oleracea HOM05D006785 ORTHO05D006259 5.7e-10 69.3 246 29.3
FAN02G2853 Fragaria x ananassa HOM05D006785 ORTHO05D006259 7.5e-10 68.9 324 31.8
FAN14G2666 Fragaria x ananassa HOM05D006785 ORTHO05D006259 1.3e-09 68.2 323 31.3
Aa31LG10G13400 Aethionema arabicum HOM05D006785 ORTHO05D006259 1.7e-09 67.8 189 40.7
Thhalv10006112m.g Eutrema salsugineum HOM05D006785 ORTHO05D006259 1.7e-09 67.8 106 41.5
CSS0028256 Camellia sinensis var. sinensis HOM05D006785 ORTHO05D006259 3.7e-09 66.6 367 25.6
CSS0047125 Camellia sinensis var. sinensis HOM05D006785 ORTHO05D006259 3.7e-09 66.6 367 25.6
C05p04790 Brassica napus HOM05D006785 ORTHO05D006259 3.1e-08 63.5 212 28.8
Duzib264G0099 Durio zibethinus HOM05D006785 ORTHO05D006259 3.1e-08 63.5 148 34.5
Nn3g20927 Nelumbo nucifera HOM05D006785 ORTHO05D006259 4.1e-08 63.2 326 25.8
Carub.0005s2562 Capsella rubella HOM05D006785 ORTHO05D006259 1.2e-07 61.6 331 31.1
FAN09G1973 Fragaria x ananassa HOM05D006785 ORTHO05D006259 3.5e-07 60.1 324 26.2
Cpa.g.sc50.80 Carica papaya HOM05D006785 ORTHO05D006259 4.5e-07 59.7 340 30.3
Actinidia11204 Actinidia chinensis HOM05D006785 ORTHO05D006259 5.9e-07 59.3 154 33.8
Migut.M00503 Erythranthe guttata HOM05D009485 ORTHO05D006259 5.9e-07 59.3 199 31.2
FAN05G2931 Fragaria x ananassa HOM05D006785 ORTHO05D006259 7.7e-07 58.9 324 26.2
Atru.chr6.2094 Acer truncatum HOM05D006785 ORTHO05D006259 1.7e-06 57.8 210 29.5
Prupe.3G172600 Prunus persica HOM05D006785 ORTHO05D006259 2.2e-06 57.4 193 40.4
Gohir.A11G224802 Gossypium hirsutum HOM05D006785 ORTHO05D006259 2.9e-06 57.0 109 37.6
RcHm_v2.0_Chr2g0151481 Rosa chinensis HOM05D006785 ORTHO05D006259 2.9e-06 57.0 323 31.9
DCAR_013314 Daucus carota HOM05D006785 ORTHO05D006259 3.8e-06 56.6 229 27.1
Lj1P620T12 Lonicera japonica HOM05D006785 ORTHO05D006259 3.8e-06 56.6 282 37.9
VMungo1127G0096 Vigna mungo HOM05D000219 ORTHO05D000226 3.8e-06 56.6 69 59.4
AL1G16560 Arabidopsis lyrata HOM05D006785 ORTHO05D006259 5.0e-06 56.2 115 33.9
BcaB02g06783 Brassica carinata HOM05D006785 ORTHO05D006259 5.0e-06 56.2 190 32.6
TAR627G0640 Trochodendron aralioides HOM05D006785 ORTHO05D006259 6.5e-06 55.8 133 33.1
MBI10_g42732_MAGBIO Magnolia biondii HOM05D006785 ORTHO05D006259 8.5e-06 55.5 102 35.3
Oeu036701.1 Olea europaea HOM05D006851 ORTHO05D008844 8.5e-06 55.5 205 31.2


User provided reference genes

Program Settings