Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.008G183900 Phaseolus vulgaris HOM05D006739 ORTHO05D008402 1.5e-86 324.7 212 100.0
VMungo0647G1229 Vigna mungo HOM05D006739 ORTHO05D008402 3.5e-59 233.8 212 81.6
Glyma.14G184200 Glycine max HOM05D006739 ORTHO05D008402 3.4e-54 217.2 213 73.7
Glyma.02G216900 Glycine max HOM05D006739 ORTHO05D008402 2.1e-51 208.0 212 73.6
VMungo0647G0534 Vigna mungo HOM05D006739 ORTHO05D008402 1.5e-46 191.8 212 57.1
Phvul.008G184000 Phaseolus vulgaris HOM05D006739 ORTHO05D008402 1.1e-41 175.6 212 59.4
Ca_05489_v3 Cicer arietinum L. HOM05D006739 ORTHO05D008402 6.6e-34 149.8 214 52.3
Ca_29619_v3 Cicer arietinum L. HOM05D006739 ORTHO05D008402 6.6e-34 149.8 214 52.3
Glyma.14G184300 Glycine max HOM05D006739 ORTHO05D008402 7.6e-30 136.3 111 68.5
Haze_22495 Corylus avellana HOM05D006739 ORTHO05D008402 3.9e-26 124.0 138 51.4
arahy.Tifrunner.gnm1.ann1.M3C1JT Arachis hypogaea HOM05D006739 ORTHO05D008402 8.7e-26 122.9 198 40.4
Cfa013823 Carpinus fangiana HOM05D006739 ORTHO05D008402 1.9e-25 121.7 139 48.2
arahy.Tifrunner.gnm1.ann1.CH37P4 Arachis hypogaea HOM05D006739 ORTHO05D008402 7.3e-25 119.8 179 50.3
CiPaw.08G057600 Carya illinoinensis HOM05D006739 ORTHO05D008402 8.1e-24 116.3 143 48.3
MD08G1206600 Malus domestica HOM05D006739 ORTHO05D008402 7.6e-22 109.8 184 64.7
QL12p039876 Quercus lobata HOM05D006739 ORTHO05D008402 1.3e-21 109.0 133 48.1
Ciclev10000605m.g Citrus clementina HOM05D006739 ORTHO05D008402 1.7e-21 108.6 133 46.6
Phvul.009G145100 Phaseolus vulgaris HOM05D006739 ORTHO05D008402 5.5e-20 103.6 115 55.7
Atru.chr13.953 Acer truncatum HOM05D006739 ORTHO05D008402 9.3e-20 102.8 180 61.7
Sc15g0003370 Simmondsia chinensis HOM05D006739 ORTHO05D008402 3.5e-19 100.9 106 54.7
TAR152G0001 Trochodendron aralioides HOM05D006739 ORTHO05D008402 4.6e-19 100.5 125 48.0
VMungo1309G0048 Vigna mungo HOM05D006739 ORTHO05D008402 4.6e-19 100.5 115 54.8
Lj1g0027306 Lotus japonicus HOM05D006739 ORTHO05D008402 5.1e-18 97.1 117 51.3
MD15G1390100 Malus domestica HOM05D006739 ORTHO05D008402 1.1e-17 95.9 106 52.8
RcHm_v2.0_Chr7g0233521 Rosa chinensis HOM05D006739 ORTHO05D008402 7.4e-17 93.2 102 50.0
CSS0036090 Camellia sinensis var. sinensis HOM05D006739 ORTHO05D008402 9.6e-17 92.8 117 47.9
Glyma.06G092600 Glycine max HOM05D006739 ORTHO05D008402 9.6e-17 92.8 110 53.6
Glyma.04G090900 Glycine max HOM05D006739 ORTHO05D008402 2.8e-16 91.3 109 54.1
Eucgr.F02164 Eucalyptus grandis HOM05D006739 ORTHO05D008402 1.1e-15 89.4 99 51.5
TAR628G0153 Trochodendron aralioides HOM05D006739 ORTHO05D008402 2.4e-15 88.2 108 49.1
Actinidia10267 Actinidia chinensis HOM05D006739 ORTHO05D008402 3.1e-15 87.8 178 46.6
Aa31LG1G4990 Aethionema arabicum HOM05D006739 ORTHO05D008402 2.6e-14 84.7 92 51.1
Dinv44882 Davidia involucrata HOM05D006739 ORTHO05D008402 5.8e-14 83.6 98 49.0
Hund26855 Selenicereus undatus HOM05D006739 ORTHO05D008402 1.0e-13 82.8 122 45.1
FvH4_5g34030 Fragaria vesca HOM05D006739 ORTHO05D008402 1.3e-13 82.4 121 43.8
FAN18G3137 Fragaria x ananassa HOM05D006739 ORTHO05D008402 1.3e-13 82.4 121 43.8
FAN08G0673 Fragaria x ananassa HOM05D006739 ORTHO05D008402 1.7e-13 82.0 121 43.8
Lsat_1_v5_gn_1_781 Lactuca sativa HOM05D006739 ORTHO05D008402 2.9e-13 81.3 90 53.3
Hma1.2p1_0010F.1_g006410 Hydrangea macrophylla HOM05D006739 ORTHO05D008402 4.9e-13 80.5 100 47.0
Potri.002G109500 Populus trichocarpa HOM05D006739 ORTHO05D008402 4.9e-13 80.5 109 45.0
Prupe.1G539000 Prunus persica HOM05D006739 ORTHO05D008402 6.5e-13 80.1 97 50.5
Sabra02G0086200 Salix brachista HOM05D006739 ORTHO05D008402 6.5e-13 80.1 91 49.5
CSS0033703 Camellia sinensis var. sinensis HOM05D006739 ORTHO05D008402 8.4e-13 79.7 108 45.4
EL10Ac1g00466 Beta vulgaris HOM05D006739 ORTHO05D008402 1.4e-12 79.0 109 44.0
TWI56G0071 Tripterygium wilfordii HOM05D006739 ORTHO05D008402 1.4e-12 79.0 110 42.7
AT1G09900 Arabidopsis thaliana HOM05D006739 ORTHO05D008402 4.2e-12 77.4 92 48.9
Duzib093G0111 Durio zibethinus HOM05D006739 ORTHO05D008402 5.5e-12 77.0 107 45.8
Carub.0001s0928 Capsella rubella HOM05D006739 ORTHO05D008402 7.1e-12 76.6 113 43.4
MBI16_g36544_MAGBIO Magnolia biondii HOM05D006739 ORTHO05D008402 9.3e-12 76.3 107 44.9
Nitab4.5_0002667g0060 Nicotiana tabacum HOM05D006739 ORTHO05D008402 9.3e-12 76.3 100 46.0
Manes.05G187600 Manihot esculenta HOM05D006739 ORTHO05D008402 1.2e-11 75.9 102 45.1
ClCG08G011830 Citrullus lanatus HOM05D006739 ORTHO05D008402 1.6e-11 75.5 90 50.0
Sed0004950 Sechium edule HOM05D006739 ORTHO05D008402 2.1e-11 75.1 88 48.9
ATR0800G015 Amborella trichopoda HOM05D006739 ORTHO05D008402 2.7e-11 74.7 64 57.8
THA.LOC104816789 Tarenaya hassleriana HOM05D006739 ORTHO05D008402 2.7e-11 74.7 89 47.2
Thecc.08G075400 Theobroma cacao HOM05D006739 ORTHO05D008402 2.7e-11 74.7 95 48.4
DCAR_019326 Daucus carota HOM05D006739 ORTHO05D008402 3.5e-11 74.3 103 42.7
ECA247G1663 Erigeron canadensis HOM05D006739 ORTHO05D008402 4.6e-11 73.9 90 48.9
CARHR009960 Cardamine hirsuta HOM05D006739 ORTHO05D008402 1.0e-10 72.8 91 48.4
AL1G20500 Arabidopsis lyrata HOM05D006739 ORTHO05D008402 1.3e-10 72.4 92 45.7
BcaC05g24834 Brassica carinata HOM05D006739 ORTHO05D008402 1.3e-10 72.4 63 58.7
CsaV3_2G030450 Cucumis sativus L. HOM05D006739 ORTHO05D008402 1.3e-10 72.4 92 44.6
Migut.N00013 Erythranthe guttata HOM05D006739 ORTHO05D008402 1.3e-10 72.4 107 43.0
HanXRQChr11g0324241 Helianthus annuus HOM05D006739 ORTHO05D008402 1.8e-10 72.0 115 36.5
COL.COLO4_35303 Corchorus olitorius HOM05D006739 ORTHO05D008402 2.3e-10 71.6 88 50.0
Nitab4.5_0002667g0050 Nicotiana tabacum HOM05D006739 ORTHO05D008402 2.3e-10 71.6 97 45.4
Sp1g08530 Schrenkiella parvula HOM05D006739 ORTHO05D008402 2.3e-10 71.6 90 47.8
Oeu020282.1 Olea europaea HOM05D006739 ORTHO05D008402 3.0e-10 71.2 60 56.7
A06p06610 Brassica napus HOM05D006739 ORTHO05D008402 3.9e-10 70.9 81 48.1
CDE07G2071 Ceratophyllum demersum HOM05D006739 ORTHO05D008402 3.9e-10 70.9 121 35.5
AUR62019126 Chenopodium quinoa HOM05D006739 ORTHO05D008402 3.9e-10 70.9 76 50.0
PGR042G0142 Punica granatum HOM05D006739 ORTHO05D008402 3.9e-10 70.9 73 49.3
AUR62014385 Chenopodium quinoa HOM05D006739 ORTHO05D008402 5.1e-10 70.5 116 40.5
Aqoxy5G01872 Aquilegia oxysepala HOM05D006739 ORTHO05D008402 6.7e-10 70.1 114 38.6
BraA06t23875Z Brassica rapa HOM05D006739 ORTHO05D008402 6.7e-10 70.1 81 48.1
MSTRG.24837 Avicennia marina HOM05D006739 ORTHO05D008402 8.7e-10 69.7 90 46.7
MELO3C011106.2 Cucumis melo HOM05D006739 ORTHO05D008402 8.7e-10 69.7 92 45.7
C05p08020 Brassica napus HOM05D006739 ORTHO05D008402 1.1e-09 69.3 82 47.6
BolC5t29554H Brassica oleracea HOM05D006739 ORTHO05D008402 1.1e-09 69.3 81 48.1
Sopen06g003030 Solanum pennellii HOM05D006739 ORTHO05D008402 1.1e-09 69.3 64 56.2
PGSC0003DMG400014713 Solanum tuberosum HOM05D006739 ORTHO05D008402 1.1e-09 69.3 64 56.2
PGSC0003DMG400027357 Solanum tuberosum HOM05D006739 ORTHO05D008402 1.1e-09 69.3 64 56.2
Peaxi162Scf01212g00003 Petunia axillaris HOM05D006739 ORTHO05D008402 1.9e-09 68.6 89 44.9
TAR381G0861 Trochodendron aralioides HOM05D006739 ORTHO05D008402 1.9e-09 68.6 93 43.0
PSO761G0270 Papaver somniferum HOM05D006739 ORTHO05D008402 2.5e-09 68.2 43 67.4
Gohir.D06G029600 Gossypium hirsutum HOM05D006739 ORTHO05D008402 4.3e-09 67.4 87 43.7
Gorai.010G032500 Gossypium raimondii HOM05D006739 ORTHO05D008402 4.3e-09 67.4 87 43.7
PSO700G0042 Papaver somniferum HOM05D006739 ORTHO05D008402 5.7e-09 67.0 81 44.4
Gohir.A06G030375 Gossypium hirsutum HOM05D006739 ORTHO05D008402 9.6e-09 66.2 87 42.5
Ah.05g171720 Amaranthus hybridus HOM05D006739 ORTHO05D008402 1.3e-08 65.9 116 36.2
Hund26854 Selenicereus undatus HOM05D006739 ORTHO05D008402 1.3e-08 65.9 186 31.2
ATR0736G141 Amborella trichopoda HOM05D007620 ORTHO05D009568 2.1e-08 65.1 73 46.6
Cc10_g08260 Coffea canephora HOM05D008425 ORTHO05D010555 2.1e-08 65.1 109 69.7
Oeu012210.1 Olea europaea HOM05D006739 ORTHO05D008402 2.1e-08 65.1 74 68.9
Rhsim07G0214200 Rhododendron simsii HOM05D006739 ORTHO05D008402 2.8e-08 64.7 108 40.7
CAN.G941.26 Capsicum annuum HOM05D006739 ORTHO05D008402 6.3e-08 63.5 41 68.3
CDE04G0064 Ceratophyllum demersum HOM05D006739 ORTHO05D008402 6.3e-08 63.5 96 42.7
Dinv22007 Davidia involucrata HOM05D006739 ORTHO05D008402 8.2e-08 63.2 109 69.7
Actinidia19612 Actinidia chinensis HOM05D006739 ORTHO05D008402 1.1e-07 62.8 41 65.9
CDE01G0171 Ceratophyllum demersum HOM05D007620 ORTHO05D009568 1.4e-07 62.4 59 42.4
CDE06G1140 Ceratophyllum demersum HOM05D002753 ORTHO05D003097 1.8e-07 62.0 96 41.7
Ca_15539_v3 Cicer arietinum L. HOM05D006739 ORTHO05D008402 1.8e-07 62.0 88 42.0
vmacro04630 Vaccinium macrocarpon HOM05D006739 ORTHO05D008402 1.8e-07 62.0 93 40.9
SalBow5G4649 Salvia bowleyana HOM05D006739 ORTHO05D008402 2.4e-07 61.6 64 50.0
CDE04G2606 Ceratophyllum demersum HOM05D007620 ORTHO05D009568 4.1e-07 60.8 76 43.4
Psat5g018720 Pisum sativum HOM05D006739 ORTHO05D008402 4.1e-07 60.8 91 46.2
Duzib116G0618 Durio zibethinus HOM05D006739 ORTHO05D008402 5.3e-07 60.5 86 45.3
Actinidia19611 Actinidia chinensis HOM05D006739 ORTHO05D008402 9.0e-07 59.7 102 39.2
RcHm_v2.0_Chr3g0449651 Rosa chinensis HOM05D007620 ORTHO05D009568 9.0e-07 59.7 109 37.6
Dinv24674 Davidia involucrata HOM05D007620 ORTHO05D009568 1.5e-06 58.9 80 43.8
AL3G14890 Arabidopsis lyrata HOM05D007620 ORTHO05D009568 4.5e-06 57.4 141 29.1
MBI16_g14339_MAGBIO Magnolia biondii HOM05D006739 ORTHO05D008402 5.9e-06 57.0 39 61.5
TPR.G15758 Trifolium pratense HOM05D000069 ORTHO05D001849 5.9e-06 57.0 98 38.8
DCAR_012846 Daucus carota HOM05D006739 ORTHO05D008402 7.6e-06 56.6 98 35.7
Manes.08G053900 Manihot esculenta HOM05D007620 ORTHO05D009568 7.6e-06 56.6 80 42.5
C05p62520 Brassica napus HOM05D007620 ORTHO05D009568 1.0e-05 56.2 130 30.8


User provided reference genes

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