Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.008G182701 Phaseolus vulgaris HOM05D004648 ORTHO05D307582 2.5e-41 172.6 107 100.0
VMungo0647G0422 Vigna mungo HOM05D004648 ORTHO05D005782 2.5e-30 136.0 94 88.3
Glyma.14G182600 Glycine max HOM05D004648 ORTHO05D005782 2.0e-22 109.8 95 82.1
Lalb_Chr04g0252771 Lupinus albus HOM05D004648 ORTHO05D005782 2.0e-14 83.2 97 49.5
Cfa013807 Carpinus fangiana HOM05D004648 ORTHO05D005782 2.6e-14 82.8 87 54.0
Cpa.g.sc21.29 Carica papaya HOM05D004648 ORTHO05D005782 1.7e-13 80.1 87 51.7
Solyc04g076470.1 Solanum lycopersicum HOM05D004648 ORTHO05D005782 2.8e-13 79.3 99 44.4
Sopen04g030220 Solanum pennellii HOM05D004648 ORTHO05D005782 2.8e-13 79.3 99 44.4
PGSC0003DMG401009338 Solanum tuberosum HOM05D004648 ORTHO05D005782 1.1e-12 77.4 99 43.4
Ca_16010_v3 Cicer arietinum L. HOM05D004648 ORTHO05D005782 1.4e-12 77.0 99 44.4
ClCG08G011630 Citrullus lanatus HOM05D004648 ORTHO05D005782 2.4e-12 76.3 86 45.3
Nitab4.5_0000131g0120 Nicotiana tabacum HOM05D000239 ORTHO05D000484 2.4e-12 76.3 88 47.7
Nitab4.5_0011537g0010 Nicotiana tabacum HOM05D004648 ORTHO05D005782 2.4e-12 76.3 88 47.7
QL09p018000 Quercus lobata HOM05D004648 ORTHO05D005782 2.4e-12 76.3 87 50.6
Sabra02G0087800 Salix brachista HOM05D004648 ORTHO05D005782 4.1e-12 75.5 87 47.1
MSTRG.24425 Avicennia marina HOM05D004648 ORTHO05D005782 7.0e-12 74.7 83 47.0
CiPaw.08G056600 Carya illinoinensis HOM05D004648 ORTHO05D005782 7.0e-12 74.7 86 48.8
MELO3C011082.2 Cucumis melo HOM05D004648 ORTHO05D005782 9.1e-12 74.3 86 44.2
CsaV3_2G030200 Cucumis sativus L. HOM05D004648 ORTHO05D005782 9.1e-12 74.3 86 44.2
Potri.002G111300 Populus trichocarpa HOM05D004648 ORTHO05D005782 1.2e-11 73.9 87 46.0
Atru.chr13.996 Acer truncatum HOM05D004648 ORTHO05D005782 2.6e-11 72.8 86 45.3
COL.COLO4_35262 Corchorus olitorius HOM05D004648 ORTHO05D005782 3.5e-11 72.4 86 44.2
Sed0006831 Sechium edule HOM05D004648 ORTHO05D005782 3.5e-11 72.4 87 43.7
Psat5g049360 Pisum sativum HOM05D004648 ORTHO05D005782 4.5e-11 72.0 99 41.4
Thecc.08G072400 Theobroma cacao HOM05D004648 ORTHO05D005782 5.9e-11 71.6 86 44.2
FvH4_5g34561 Fragaria vesca HOM05D004648 ORTHO05D005782 7.7e-11 71.2 93 45.2
TPR.G6370 Trifolium pratense HOM05D004648 ORTHO05D005782 7.7e-11 71.2 99 41.4
Duzib093G0339 Durio zibethinus HOM05D004648 ORTHO05D005782 1.7e-10 70.1 86 43.0
Gohir.A05G219000 Gossypium hirsutum HOM05D004648 ORTHO05D005782 2.9e-10 69.3 86 43.0
Gohir.D05G221700 Gossypium hirsutum HOM05D004648 ORTHO05D005782 2.9e-10 69.3 86 43.0
Gorai.009G228900 Gossypium raimondii HOM05D004648 ORTHO05D005782 2.9e-10 69.3 86 43.0
Nn5g29856 Nelumbo nucifera HOM05D004648 ORTHO05D005782 2.9e-10 69.3 90 46.7
RcHm_v2.0_Chr7g0235251 Rosa chinensis HOM05D004648 ORTHO05D005782 2.9e-10 69.3 89 44.9
TAR376G0132 Trochodendron aralioides HOM05D004648 ORTHO05D005782 2.9e-10 69.3 87 44.8
Lj1g0017346 Lotus japonicus HOM05D004648 ORTHO05D005782 5.0e-10 68.6 99 39.4
CANSAT25G1975 Cannabis sativa HOM05D004648 ORTHO05D005782 6.5e-10 68.2 86 43.0
PSO541G6255 Papaver somniferum HOM05D004648 ORTHO05D005782 6.5e-10 68.2 88 43.2
Medtr3g100100 Medicago truncatula HOM05D004648 ORTHO05D005782 1.1e-09 67.4 99 41.4
Oeu054771.1 Olea europaea HOM05D004648 ORTHO05D005782 1.1e-09 67.4 88 43.2
CAN.G475.10 Capsicum annuum HOM05D004648 ORTHO05D005782 1.5e-09 67.0 66 45.5
Cc10_g08430 Coffea canephora HOM05D004648 ORTHO05D005782 1.5e-09 67.0 87 39.1
Duzib041G0289 Durio zibethinus HOM05D004648 ORTHO05D005782 1.9e-09 66.6 86 41.9
TAR628G0215 Trochodendron aralioides HOM05D004648 ORTHO05D005782 2.5e-09 66.2 86 44.2
Peaxi162Scf00454g10013 Petunia axillaris HOM05D004648 ORTHO05D005782 3.2e-09 65.9 87 42.5
Migut.N02848 Erythranthe guttata HOM05D004648 ORTHO05D005782 7.2e-09 64.7 85 45.9
Lalb_Chr08g0242581 Lupinus albus HOM05D004648 ORTHO05D005782 7.2e-09 64.7 107 35.5
vmacro04645 Vaccinium macrocarpon HOM05D004648 ORTHO05D005782 7.2e-09 64.7 92 39.1
Eucgr.F00428 Eucalyptus grandis HOM05D004648 ORTHO05D005782 9.4e-09 64.3 86 41.9
SalBow5G0620 Salvia bowleyana HOM05D004648 ORTHO05D005782 1.6e-08 63.5 86 40.7
Glyma.04G095900 Glycine max HOM05D004648 ORTHO05D005782 2.1e-08 63.2 99 39.4
Aqoxy6G00847 Aquilegia oxysepala HOM05D004648 ORTHO05D005782 2.7e-08 62.8 88 40.9
MD15G1387400 Malus domestica HOM05D004648 ORTHO05D005782 2.7e-08 62.8 90 41.1
Prupe.1G533800 Prunus persica HOM05D004648 ORTHO05D005782 2.7e-08 62.8 88 42.0
SalBow5G1021 Salvia bowleyana HOM05D004648 ORTHO05D005782 3.6e-08 62.4 86 39.5
Dinv13591 Davidia involucrata HOM05D004648 ORTHO05D005782 8.0e-08 61.2 92 41.3
Glyma.06G097600 Glycine max HOM05D004648 ORTHO05D005782 8.0e-08 61.2 88 43.2
MD08G1200200 Malus domestica HOM05D004648 ORTHO05D005782 8.0e-08 61.2 90 40.0
Actinidia06509 Actinidia chinensis HOM05D004648 ORTHO05D005782 1.4e-07 60.5 84 41.7
SGA_v2.0_scaffold48G17844 Striga asiatica HOM05D004648 ORTHO05D005782 1.4e-07 60.5 85 41.2
Actinidia19623 Actinidia chinensis HOM05D004648 ORTHO05D005782 1.8e-07 60.1 88 39.8
Lsat_1_v5_gn_8_20321 Lactuca sativa HOM05D004648 ORTHO05D005782 3.0e-07 59.3 55 47.3
Manes.05G189800 Manihot esculenta HOM05D004648 ORTHO05D005782 3.0e-07 59.3 111 36.0
Phvul.009G035900 Phaseolus vulgaris HOM05D004648 ORTHO05D005782 3.0e-07 59.3 99 37.4
Prupe.6G203100 Prunus persica HOM05D004648 ORTHO05D005782 3.0e-07 59.3 87 36.8
SGA_v2.0_scaffold45G17227 Striga asiatica HOM05D004648 ORTHO05D005782 3.0e-07 59.3 85 38.8
VMungo1309G1710 Vigna mungo HOM05D004648 ORTHO05D005782 3.0e-07 59.3 99 36.4
EL10Ac6g15193 Beta vulgaris HOM05D004648 ORTHO05D005782 4.0e-07 58.9 57 49.1
DCAR_009556 Daucus carota HOM05D004648 ORTHO05D005782 4.0e-07 58.9 82 36.6
HanXRQChr09g0250941 Helianthus annuus HOM05D004648 ORTHO05D005782 6.7e-07 58.2 88 33.0
Rhsim10G0173500 Rhododendron simsii HOM05D004648 ORTHO05D005782 6.7e-07 58.2 110 35.5
MD15G1310800 Malus domestica HOM05D004648 ORTHO05D005782 8.8e-07 57.8 87 35.6
HanXRQChr02g0046211 Helianthus annuus HOM05D004648 ORTHO05D005782 1.5e-06 57.0 84 34.5
PGR042G2328 Punica granatum HOM05D004648 ORTHO05D005782 1.5e-06 57.0 88 38.6
CSS0043130 Camellia sinensis var. sinensis HOM05D004648 ORTHO05D005782 2.0e-06 56.6 86 41.9
Ciclev10002461m.g Citrus clementina HOM05D004648 ORTHO05D005782 2.0e-06 56.6 55 52.7
TWI12G1102 Tripterygium wilfordii HOM05D004648 ORTHO05D005782 2.0e-06 56.6 88 38.6
EL10Ac2g03122 Beta vulgaris HOM05D004648 ORTHO05D005782 2.6e-06 56.2 57 47.4
ECA247G1048 Erigeron canadensis HOM05D004648 ORTHO05D005782 2.6e-06 56.2 82 31.7
Migut.K00806 Erythranthe guttata HOM05D004648 ORTHO05D005782 2.6e-06 56.2 86 36.0
Hma1.2p1_0802F.1_g220630 Hydrangea macrophylla HOM05D004648 ORTHO05D005782 2.6e-06 56.2 57 45.6
CSS0033796 Camellia sinensis var. sinensis HOM05D004648 ORTHO05D005782 4.4e-06 55.5 86 40.7
FvH4_1g19520 Fragaria vesca HOM05D004648 ORTHO05D005782 4.4e-06 55.5 87 37.9
RcHm_v2.0_Chr2g0111021 Rosa chinensis HOM05D004648 ORTHO05D005782 4.4e-06 55.5 87 36.8
Ah.03g139860 Amaranthus hybridus HOM05D004648 ORTHO05D005782 5.7e-06 55.1 57 45.6
CDE02G1147 Ceratophyllum demersum HOM05D004648 ORTHO05D005782 5.7e-06 55.1 86 38.4
AUR62017983 Chenopodium quinoa HOM05D004648 ORTHO05D005782 5.7e-06 55.1 88 38.6
Sc26g0002990 Simmondsia chinensis HOM05D004648 ORTHO05D005782 5.7e-06 55.1 83 34.9
Sc26g0003620 Simmondsia chinensis HOM05D004648 ORTHO05D005782 5.7e-06 55.1 83 34.9
AUR62003673 Chenopodium quinoa HOM05D004648 ORTHO05D005782 7.5e-06 54.7 88 38.6
QL06p035918 Quercus lobata HOM05D004648 ORTHO05D005782 7.5e-06 54.7 89 32.6
Cc07_g14000 Coffea canephora HOM05D004648 ORTHO05D005782 9.7e-06 54.3 55 43.6
Sc26g0002870 Simmondsia chinensis HOM05D004648 ORTHO05D005782 9.7e-06 54.3 82 34.1


User provided reference genes

Program Settings