Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.008G180900 Phaseolus vulgaris HOM05D000157 ORTHO05D307481 1.2e-144 516.5 272 100.0
VMungo1127G2212 Vigna mungo HOM05D000157 ORTHO05D011823 2.5e-09 67.0 45 64.4
Phvul.011G129900 Phaseolus vulgaris HOM05D000157 ORTHO05D011823 5.6e-09 65.9 136 34.6
arahy.Tifrunner.gnm1.ann1.CF6KXU Arachis hypogaea HOM05D000157 ORTHO05D000311 2.1e-08 63.9 77 44.2
arahy.Tifrunner.gnm1.ann1.DI0R83 Arachis hypogaea HOM05D000157 ORTHO05D000311 2.1e-08 63.9 77 44.2
Phvul.011G087200 Phaseolus vulgaris HOM05D000157 ORTHO05D011823 2.1e-08 63.9 45 62.2
Phvul.011G171000 Phaseolus vulgaris HOM05D000157 ORTHO05D011823 2.4e-07 60.5 159 30.2
Lalb_Chr17g0348501 Lupinus albus HOM05D001172 ORTHO05D001128 4.0e-07 59.7 136 30.1
Phvul.011G087400 Phaseolus vulgaris HOM05D000074 ORTHO05D011823 5.3e-07 59.3 38 63.2
Sp4g10760 Schrenkiella parvula HOM05D000157 ORTHO05D000311 5.3e-07 59.3 73 34.2
Lalb_Chr19g0136851 Lupinus albus HOM05D000157 ORTHO05D011823 9.0e-07 58.5 55 45.5
Phvul.011G115800 Phaseolus vulgaris HOM05D000157 ORTHO05D011823 9.0e-07 58.5 38 63.2
AL4G22280 Arabidopsis lyrata HOM05D000157 ORTHO05D000311 1.2e-06 58.2 54 44.4
Phvul.011G168900 Phaseolus vulgaris HOM05D000157 ORTHO05D011823 1.2e-06 58.2 137 30.7
A07p18450 Brassica napus HOM05D000157 ORTHO05D000311 1.5e-06 57.8 51 45.1
Phvul.011G169222 Phaseolus vulgaris HOM05D000157 ORTHO05D011823 1.5e-06 57.8 45 57.8
Glyma.11G191800 Glycine max HOM05D000157 ORTHO05D011823 2.0e-06 57.4 45 53.3
Phvul.011G115900 Phaseolus vulgaris HOM05D000157 ORTHO05D011823 2.0e-06 57.4 41 58.5
Sc06g0003420 Simmondsia chinensis HOM05D000157 ORTHO05D000747 2.0e-06 57.4 44 40.9
AT2G27940 Arabidopsis thaliana HOM05D000157 ORTHO05D000311 2.6e-06 57.0 54 42.6
Phvul.011G170400 Phaseolus vulgaris HOM05D000157 ORTHO05D011823 2.6e-06 57.0 45 57.8
Phvul.011G170600 Phaseolus vulgaris HOM05D000157 ORTHO05D011823 2.6e-06 57.0 45 57.8
Phvul.011G171100 Phaseolus vulgaris HOM05D000157 ORTHO05D011823 2.6e-06 57.0 45 57.8
Phvul.011G171300 Phaseolus vulgaris HOM05D000157 ORTHO05D011823 2.6e-06 57.0 45 57.8
Phvul.011G171522 Phaseolus vulgaris HOM05D000157 ORTHO05D011823 2.6e-06 57.0 45 57.8
Glyma.02G291200 Glycine max HOM05D001172 ORTHO05D001128 3.4e-06 56.6 90 33.3
QL03p039421 Quercus lobata HOM05D000157 ORTHO05D000311 3.4e-06 56.6 48 54.2
MSTRG.18709 Avicennia marina HOM05D000157 ORTHO05D000311 4.5e-06 56.2 46 52.2
Thhalv10017824m.g Eutrema salsugineum HOM05D000157 ORTHO05D000295 4.5e-06 56.2 54 38.9
PSO017G0865 Papaver somniferum HOM05D000157 ORTHO05D004871 4.5e-06 56.2 82 34.1
Phvul.011G087300 Phaseolus vulgaris HOM05D000074 ORTHO05D011823 4.5e-06 56.2 34 67.6
SGA_v2.0_scaffold50G18561 Striga asiatica HOM05D000157 ORTHO05D000691 4.5e-06 56.2 49 51.0
unitig_27.g25114 Utricularia gibba HOM05D000086 ORTHO05D000311 4.5e-06 56.2 47 48.9
BraA07t29561Z Brassica rapa HOM05D000157 ORTHO05D000311 5.8e-06 55.8 51 43.1
HanXRQChr15g0495921 Helianthus annuus HOM05D000157 ORTHO05D000691 5.8e-06 55.8 69 40.6
Phvul.011G170500 Phaseolus vulgaris HOM05D000157 ORTHO05D011823 5.8e-06 55.8 45 57.8
Rhsim13G0102000 Rhododendron simsii HOM05D000086 ORTHO05D000311 5.8e-06 55.8 47 48.9
Ciclev10010481m.g Citrus clementina HOM05D000086 ORTHO05D001065 7.6e-06 55.5 47 46.8
COL.COLO4_22252 Corchorus olitorius HOM05D000086 ORTHO05D010642 7.6e-06 55.5 71 38.0
Dinv42662 Davidia involucrata HOM05D000157 ORTHO05D000691 7.6e-06 55.5 88 34.1
Duzib205G1777 Durio zibethinus HOM05D000354 ORTHO05D000717 7.6e-06 55.5 64 43.8
Gorai.008G016600 Gossypium raimondii HOM05D000086 ORTHO05D000431 7.6e-06 55.5 90 35.6
Oeu008366.1 Olea europaea HOM05D000157 ORTHO05D000311 1.0e-05 55.1 54 40.7
Oeu056661.1 Olea europaea HOM05D000157 ORTHO05D000311 1.0e-05 55.1 52 48.1


User provided reference genes

Program Settings