Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.008G176900 Phaseolus vulgaris HOM05D008046 ORTHO05D004477 1.2e-71 273.5 186 100.0
VMungo0647G1155 Vigna mungo HOM05D008046 ORTHO05D004477 6.7e-54 214.5 184 72.8
Glyma.14G177400 Glycine max HOM05D008046 ORTHO05D004477 1.3e-44 183.7 195 71.8
Glyma.02G209200 Glycine max HOM05D008046 ORTHO05D004477 1.1e-43 180.6 198 67.2
Lalb_Chr10g0102531 Lupinus albus HOM05D008046 ORTHO05D004477 1.5e-24 117.1 192 47.9
VMungo1383G2321 Vigna mungo HOM05D008046 ORTHO05D004477 2.3e-17 93.2 60 73.3
Lalb_Chr23g0270371 Lupinus albus HOM05D008046 ORTHO05D004477 2.9e-17 92.8 189 48.1
Phvul.009G032900 Phaseolus vulgaris HOM05D008046 ORTHO05D004477 1.5e-16 90.5 172 48.3
TPR.G24247 Trifolium pratense HOM05D008046 ORTHO05D004477 1.5e-16 90.5 189 44.4
Lj1g0004298 Lotus japonicus HOM05D008046 ORTHO05D004477 3.6e-15 85.9 187 46.5
Medtr5g064640 Medicago truncatula HOM05D008046 ORTHO05D004477 4.7e-15 85.5 168 44.0
Glyma.06G100900 Glycine max HOM05D008046 ORTHO05D004477 1.8e-14 83.6 166 52.4
Glyma.04G099200 Glycine max HOM05D008046 ORTHO05D004477 9.8e-13 77.8 175 45.1
Lalb_Chr08g0242201 Lupinus albus HOM05D008046 ORTHO05D004477 1.3e-12 77.4 190 48.9
Psat0s5249g0040 Pisum sativum HOM05D008046 ORTHO05D004477 5.4e-11 72.0 165 46.7
Oeu048965.1 Olea europaea HOM05D008046 ORTHO05D004477 9.2e-11 71.2 142 45.8
QL02p002440 Quercus lobata HOM05D008046 ORTHO05D004477 9.2e-11 71.2 151 48.3
GSVIVG01009081001 Vitis vinifera HOM05D008046 ORTHO05D004477 2.3e-09 66.6 146 46.6
Potri.002G100500 Populus trichocarpa HOM05D008046 ORTHO05D004477 3.0e-09 66.2 46 67.4
Cc10_g06700 Coffea canephora HOM05D008046 ORTHO05D004477 3.9e-09 65.9 143 45.5
TAR381G0533 Trochodendron aralioides HOM05D008046 ORTHO05D004477 6.6e-09 65.1 154 44.8
TWI12G0518 Tripterygium wilfordii HOM05D008046 ORTHO05D004477 8.6e-09 64.7 166 39.2
Thecc.08G102400 Theobroma cacao HOM05D008046 ORTHO05D004477 1.1e-08 64.3 164 46.3
Gohir.A01G132600 Gossypium hirsutum HOM05D008046 ORTHO05D004477 1.5e-08 63.9 145 35.9
Manes.02G149300 Manihot esculenta HOM05D008046 ORTHO05D004477 1.5e-08 63.9 160 51.9
Duzib093G0605 Durio zibethinus HOM05D008046 ORTHO05D004477 1.9e-08 63.5 167 51.5
Sabra02G0078700 Salix brachista HOM05D008046 ORTHO05D004477 1.9e-08 63.5 45 68.9
Duzib041G0197 Durio zibethinus HOM05D008046 ORTHO05D004477 2.5e-08 63.2 57 61.4
Gohir.A02G076800 Gossypium hirsutum HOM05D008046 ORTHO05D004477 2.5e-08 63.2 57 64.9
Gorai.005G094600 Gossypium raimondii HOM05D008046 ORTHO05D004477 2.5e-08 63.2 57 64.9
Manes.18G064000 Manihot esculenta HOM05D008046 ORTHO05D004477 2.5e-08 63.2 51 58.8
Duzib116G0877 Durio zibethinus HOM05D008046 ORTHO05D004477 4.3e-08 62.4 161 42.2
CSS0041686 Camellia sinensis var. sinensis HOM05D008046 ORTHO05D004477 9.5e-08 61.2 136 39.7
Gohir.D02G084000 Gossypium hirsutum HOM05D008046 ORTHO05D004477 9.5e-08 61.2 57 63.2
Medtr3g099490 Medicago truncatula HOM05D008046 ORTHO05D004477 9.5e-08 61.2 159 48.4
CSS0046665 Camellia sinensis var. sinensis HOM05D008046 ORTHO05D004477 1.2e-07 60.8 136 39.0
Prupe.1G522800 Prunus persica HOM05D018381 ORTHO05D004477 1.2e-07 60.8 181 40.3
TAR625G0942 Trochodendron aralioides HOM05D008046 ORTHO05D004477 1.2e-07 60.8 149 33.6
Potri.005G161700 Populus trichocarpa HOM05D008046 ORTHO05D004477 1.6e-07 60.5 150 50.0
COL.COLO4_12009 Corchorus olitorius HOM05D008046 ORTHO05D004477 2.1e-07 60.1 145 41.4
FAN04G3140 Fragaria x ananassa HOM05D018381 ORTHO05D004477 2.1e-07 60.1 42 59.5
FAN13G0458 Fragaria x ananassa HOM05D018381 ORTHO05D004477 2.1e-07 60.1 42 59.5
FAN18G3731 Fragaria x ananassa HOM05D018381 ORTHO05D004477 2.1e-07 60.1 42 59.5
FvH4_5g36590 Fragaria vesca HOM05D018381 ORTHO05D004477 2.8e-07 59.7 42 59.5
FAN08G1425 Fragaria x ananassa HOM05D018381 ORTHO05D004477 2.8e-07 59.7 42 59.5
SalBow5G1479 Salvia bowleyana HOM05D008046 ORTHO05D004477 2.8e-07 59.7 41 68.3
CSS0034401 Camellia sinensis var. sinensis HOM05D008046 ORTHO05D004477 3.6e-07 59.3 46 63.0
CSS0039341 Camellia sinensis var. sinensis HOM05D008046 ORTHO05D004477 3.6e-07 59.3 46 63.0
Haze_18268 Corylus avellana HOM05D008046 ORTHO05D004477 3.6e-07 59.3 36 75.0
Haze_18269 Corylus avellana HOM05D008046 ORTHO05D004477 3.6e-07 59.3 36 75.0
Hma1.2p1_1148F.1_g261600 Hydrangea macrophylla HOM05D008046 ORTHO05D004477 4.7e-07 58.9 160 40.0
Nn1g05455 Nelumbo nucifera HOM05D008046 ORTHO05D004477 4.7e-07 58.9 40 65.0
MSTRG.3689 Avicennia marina HOM05D008046 ORTHO05D004477 6.2e-07 58.5 43 60.5
Nn5g30002 Nelumbo nucifera HOM05D008176 ORTHO05D004477 6.2e-07 58.5 148 28.4
CsaV3_2G029890 Cucumis sativus L. HOM05D037353 ORTHO05D034654 8.0e-07 58.2 46 58.7
Lsat_1_v5_gn_6_104300 Lactuca sativa HOM05D008046 ORTHO05D004477 8.0e-07 58.2 33 75.8
SGA_v2.0_scaffold45G17135 Striga asiatica HOM05D010872 ORTHO05D004477 8.0e-07 58.2 56 55.4
CiPaw.15G046100 Carya illinoinensis HOM05D008046 ORTHO05D004477 1.1e-06 57.8 178 41.6
Gorai.002G141100 Gossypium raimondii HOM05D008046 ORTHO05D004477 1.4e-06 57.4 144 43.1
Sopen06g012470 Solanum pennellii HOM05D046744 ORTHO05D051269 1.8e-06 57.0 50 56.0
TAR628G0226 Trochodendron aralioides HOM05D008046 ORTHO05D004477 1.8e-06 57.0 30 80.0
CANSAT25G2152 Cannabis sativa HOM05D008046 ORTHO05D004477 2.3e-06 56.6 68 48.5
PGR031G3049 Punica granatum HOM05D008046 ORTHO05D004477 2.3e-06 56.6 41 61.0
CDE05G1898 Ceratophyllum demersum HOM05D000157 ORTHO05D000691 3.1e-06 56.2 52 50.0
Aqoxy6G00716 Aquilegia oxysepala HOM05D008046 ORTHO05D004477 4.0e-06 55.8 36 66.7
TWI36G0888 Tripterygium wilfordii HOM05D008046 ORTHO05D004477 4.0e-06 55.8 38 63.2
Gohir.A06G033600 Gossypium hirsutum HOM05D037684 ORTHO05D004477 6.8e-06 55.1 32 75.0
Gohir.D06G034500 Gossypium hirsutum HOM05D037684 ORTHO05D004477 6.8e-06 55.1 32 75.0
Gorai.010G038000 Gossypium raimondii HOM05D037684 ORTHO05D004477 6.8e-06 55.1 32 75.0
THA.LOC104809723 Tarenaya hassleriana HOM05D009138 ORTHO05D011294 6.8e-06 55.1 38 68.4
CiPaw.16G033000 Carya illinoinensis HOM05D008046 ORTHO05D004477 8.9e-06 54.7 54 59.3
Solyc04g074680.1 Solanum lycopersicum HOM05D010872 ORTHO05D004477 8.9e-06 54.7 61 49.2
THA.LOC104800226 Tarenaya hassleriana HOM05D009138 ORTHO05D011294 8.9e-06 54.7 48 54.2
unitig_32.g11784 Utricularia gibba HOM05D008046 ORTHO05D004477 8.9e-06 54.7 47 57.4


User provided reference genes

Program Settings