Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.008G169200 Phaseolus vulgaris HOM05D001663 ORTHO05D005717 3.9e-271 937.6 477 100.0
Ca_26536_v3 Cicer arietinum L. HOM05D001663 ORTHO05D005717 1.2e-245 852.8 477 90.8
Lj1g0004140 Lotus japonicus HOM05D001663 ORTHO05D005717 8.9e-244 846.7 477 90.4
TPR.G30426 Trifolium pratense HOM05D001663 ORTHO05D005717 2.9e-242 841.6 477 90.4
Medtr5g061040 Medicago truncatula HOM05D001663 ORTHO05D005717 3.3e-238 828.2 474 88.4
Glyma.13G085400 Glycine max HOM05D001663 ORTHO05D005717 4.3e-238 827.8 477 89.3
Lalb_Chr10g0102081 Lupinus albus HOM05D001663 ORTHO05D005717 2.8e-237 825.1 477 88.1
Lalb_Chr04g0253241 Lupinus albus HOM05D001663 ORTHO05D005717 8.7e-231 803.5 477 86.4
arahy.Tifrunner.gnm1.ann1.7M6WCL Arachis hypogaea HOM05D001663 ORTHO05D005717 9.9e-227 790.0 477 85.5
Dinv44724 Davidia involucrata HOM05D001663 ORTHO05D005717 2.5e-217 758.8 480 81.0
Ciclev10001001m.g Citrus clementina HOM05D001663 ORTHO05D005717 1.3e-213 746.5 480 79.4
FvH4_5g38340 Fragaria vesca HOM05D001663 ORTHO05D005717 6.3e-213 744.2 478 78.7
Prupe.1G508500 Prunus persica HOM05D001663 ORTHO05D005717 8.2e-213 743.8 480 79.0
FAN18G1299 Fragaria x ananassa HOM05D001663 ORTHO05D005717 2.4e-212 742.3 473 79.1
FAN08G2783 Fragaria x ananassa HOM05D001663 ORTHO05D005717 1.2e-211 740.0 473 79.1
GSVIVG01008963001 Vitis vinifera HOM05D001663 ORTHO05D005717 1.2e-211 740.0 480 78.5
Rhsim07G0199300 Rhododendron simsii HOM05D001663 ORTHO05D005717 1.3e-210 736.5 479 79.7
Glyma.14G167200 Glycine max HOM05D001663 ORTHO05D005717 2.9e-210 735.3 413 92.0
COL.COLO4_16510 Corchorus olitorius HOM05D001663 ORTHO05D005717 6.5e-210 734.2 480 79.2
FAN04G0194 Fragaria x ananassa HOM05D001663 ORTHO05D005717 8.4e-210 733.8 475 78.1
Duzib041G0602 Durio zibethinus HOM05D001663 ORTHO05D005717 1.4e-209 733.0 480 78.5
CSS0006833 Camellia sinensis var. sinensis HOM05D001663 ORTHO05D005717 2.5e-209 732.3 481 79.4
Manes.18G101600 Manihot esculenta HOM05D001663 ORTHO05D005717 3.2e-209 731.9 480 77.9
RhsimUnG0073000 Rhododendron simsii HOM05D001663 ORTHO05D005717 7.9e-208 727.2 479 79.3
Thecc.08G114700 Theobroma cacao HOM05D001663 ORTHO05D005717 3.9e-207 724.9 480 77.9
Nn5g28968 Nelumbo nucifera HOM05D001663 ORTHO05D005717 5.1e-207 724.5 480 77.1
TAR376G0684 Trochodendron aralioides HOM05D001663 ORTHO05D005717 4.3e-206 721.5 479 76.2
MD15G1361100 Malus domestica HOM05D001663 ORTHO05D005717 6.3e-205 717.6 475 77.9
Gorai.005G092500 Gossypium raimondii HOM05D001663 ORTHO05D005717 1.8e-204 716.1 480 76.9
Duzib093G0504 Durio zibethinus HOM05D001663 ORTHO05D005717 3.1e-204 715.3 480 76.5
vmacro04774 Vaccinium macrocarpon HOM05D001663 ORTHO05D005717 9.0e-204 713.8 516 72.7
Sabra02G0071900 Salix brachista HOM05D001663 ORTHO05D005717 1.2e-203 713.4 496 73.8
CiPaw.05G231300 Carya illinoinensis HOM05D001663 ORTHO05D005717 3.4e-203 711.8 480 76.5
MD08G1174500 Malus domestica HOM05D001663 ORTHO05D005717 5.9e-203 711.1 476 76.3
QL12p035556 Quercus lobata HOM05D001663 ORTHO05D005717 7.7e-203 710.7 477 76.1
Gohir.D05G269900 Gossypium hirsutum HOM05D001663 ORTHO05D005717 1.9e-201 706.1 480 75.6
Gorai.009G282600 Gossypium raimondii HOM05D001663 ORTHO05D005717 2.5e-201 705.7 480 75.6
Nn1g05239 Nelumbo nucifera HOM05D001663 ORTHO05D005717 2.5e-201 705.7 480 75.8
Eucgr.H00930 Eucalyptus grandis HOM05D001663 ORTHO05D005717 1.6e-200 703.0 480 74.8
Potri.002G090900 Populus trichocarpa HOM05D001663 ORTHO05D005717 1.6e-200 703.0 479 75.4
Hma1.2p1_0529F.1_g173150 Hydrangea macrophylla HOM05D001663 ORTHO05D005717 2.7e-200 702.2 481 75.5
Gohir.A02G075400 Gossypium hirsutum HOM05D001663 ORTHO05D005717 4.6e-200 701.4 480 75.0
Thhalv10028627m.g Eutrema salsugineum HOM05D001663 ORTHO05D005717 3.0e-199 698.7 478 73.8
Cpa.g.sc1782.1 Carica papaya HOM05D001663 ORTHO05D005717 3.9e-199 698.4 480 74.6
Nitab4.5_0001915g0140 Nicotiana tabacum HOM05D001663 ORTHO05D005717 2.5e-198 695.7 481 74.4
TWI12G1423 Tripterygium wilfordii HOM05D001663 ORTHO05D005717 9.7e-198 693.7 480 74.4
Nitab4.5_0004952g0050 Nicotiana tabacum HOM05D001663 ORTHO05D005717 2.2e-197 692.6 477 74.6
Sp6g09330 Schrenkiella parvula HOM05D001663 ORTHO05D005717 1.1e-196 690.3 478 73.2
HanXRQChr05g0162261 Helianthus annuus HOM05D001663 ORTHO05D005717 3.1e-196 688.7 481 74.0
PGSC0003DMG400027563 Solanum tuberosum HOM05D001663 ORTHO05D005717 2.6e-195 685.6 485 72.4
TWI56G1202 Tripterygium wilfordii HOM05D001663 ORTHO05D005717 3.4e-195 685.3 480 73.5
CAN.G617.5 Capsicum annuum HOM05D001663 ORTHO05D005717 4.5e-195 684.9 485 72.6
Solyc04g072440.4 Solanum lycopersicum HOM05D001663 ORTHO05D005717 4.5e-195 684.9 485 72.8
Migut.C00211 Erythranthe guttata HOM05D001663 ORTHO05D005717 1.0e-194 683.7 478 73.6
Sopen04g028600 Solanum pennellii HOM05D001663 ORTHO05D005717 1.0e-194 683.7 485 72.6
THA.LOC104813136 Tarenaya hassleriana HOM05D001663 ORTHO05D005717 1.3e-194 683.3 478 73.4
Gohir.D02G082500 Gossypium hirsutum HOM05D001663 ORTHO05D005717 1.7e-194 682.9 480 74.2
Aa31LG9G14450 Aethionema arabicum HOM05D001663 ORTHO05D005717 2.9e-194 682.2 481 73.2
Cc10_g06030 Coffea canephora HOM05D001663 ORTHO05D005717 3.8e-194 681.8 481 70.3
BcaC04g20910 Brassica carinata HOM05D001663 ORTHO05D005717 5.0e-194 681.4 478 72.0
C09p38040 Brassica napus HOM05D001663 ORTHO05D005717 5.0e-194 681.4 478 72.0
BolC9t56640H Brassica oleracea HOM05D001663 ORTHO05D005717 5.0e-194 681.4 478 72.0
A09p30170 Brassica napus HOM05D001663 ORTHO05D005717 6.5e-194 681.0 478 71.5
THA.LOC104816946 Tarenaya hassleriana HOM05D001663 ORTHO05D005717 8.5e-194 680.6 482 73.4
Aqoxy3G00244 Aquilegia oxysepala HOM05D001663 ORTHO05D005717 1.4e-193 679.9 511 69.1
Haze_00550 Corylus avellana HOM05D001663 ORTHO05D005717 1.9e-193 679.5 480 74.6
BcaB01g01352 Brassica carinata HOM05D001663 ORTHO05D005717 3.6e-192 675.2 478 71.8
CANSAT25G1457 Cannabis sativa HOM05D001663 ORTHO05D005717 7.9e-192 674.1 479 72.7
PSO210G6007 Papaver somniferum HOM05D001663 ORTHO05D005717 7.9e-192 674.1 480 72.9
CARHR259570 Cardamine hirsuta HOM05D001663 ORTHO05D005717 1.0e-191 673.7 478 71.3
ECA246G3782 Erigeron canadensis HOM05D001663 ORTHO05D005717 3.0e-191 672.2 478 72.6
PSO447G0047 Papaver somniferum HOM05D001663 ORTHO05D005717 3.0e-191 672.2 480 72.5
AT4G08540 Arabidopsis thaliana HOM05D001663 ORTHO05D005717 1.5e-190 669.8 478 71.5
PGR042G1550 Punica granatum HOM05D001663 ORTHO05D005717 3.3e-190 668.7 478 72.6
Psat2g076640 Pisum sativum HOM05D001663 ORTHO05D005717 3.7e-189 665.2 442 80.1
RcHm_v2.0_Chr7g0240361 Rosa chinensis HOM05D001663 ORTHO05D005717 6.3e-189 664.5 422 79.6
DCAR_003554 Daucus carota HOM05D001663 ORTHO05D005717 1.1e-188 663.7 471 72.0
Carub.0006s2708 Capsella rubella HOM05D001663 ORTHO05D005717 2.0e-187 659.4 478 71.3
EL10Ac8g18308 Beta vulgaris HOM05D001663 ORTHO05D005717 2.9e-186 655.6 478 70.1
MSTRG.24955 Avicennia marina HOM05D001663 ORTHO05D005717 5.5e-185 651.4 478 70.9
Ah.09g230050 Amaranthus hybridus HOM05D001663 ORTHO05D005717 1.8e-183 646.4 478 69.7
Cfa015941 Carpinus fangiana HOM05D001663 ORTHO05D005717 5.2e-183 644.8 474 73.2
SalBow7G1241 Salvia bowleyana HOM05D001663 ORTHO05D005717 1.2e-179 633.6 534 64.0
Lsat_1_v5_gn_6_102021 Lactuca sativa HOM05D001663 ORTHO05D005717 6.1e-176 621.3 487 67.1
MELO3C008130.2 Cucumis melo HOM05D001663 ORTHO05D005717 3.7e-173 612.1 478 68.0
AL6G42350 Arabidopsis lyrata HOM05D001663 ORTHO05D005717 3.1e-172 609.0 478 66.7
CsaV3_2G033570 Cucumis sativus L. HOM05D001663 ORTHO05D005717 1.6e-171 606.7 479 67.4
SGA_v2.0_scaffold48G18009 Striga asiatica HOM05D001663 ORTHO05D005717 3.5e-171 605.5 477 66.5
MSTRG.947 Avicennia marina HOM05D001663 ORTHO05D005717 4.5e-171 605.1 477 67.3
Peaxi162Scf00756g00434 Petunia axillaris HOM05D001663 ORTHO05D005717 1.3e-170 603.6 483 66.3
Lj6A263G20 Lonicera japonica HOM05D001663 ORTHO05D005717 8.5e-170 600.9 480 67.5
BraA09t38581Z Brassica rapa HOM05D001663 ORTHO05D005717 2.5e-169 599.4 578 57.3
Sed0003415 Sechium edule HOM05D001663 ORTHO05D005717 4.7e-168 595.1 478 66.1
AUR62033240 Chenopodium quinoa HOM05D001663 ORTHO05D005717 1.0e-167 594.0 424 71.5
FAN13G3230 Fragaria x ananassa HOM05D001663 ORTHO05D005717 1.4e-167 593.6 478 66.3
Actinidia29571 Actinidia chinensis HOM05D001663 ORTHO05D005717 1.5e-166 590.1 443 71.3
ClCG11G008030 Citrullus lanatus HOM05D001663 ORTHO05D005717 2.6e-166 589.3 499 65.1
CSS0003227 Camellia sinensis var. sinensis HOM05D001663 ORTHO05D005717 2.4e-164 582.8 376 79.8
Atru.chr13.1295 Acer truncatum HOM05D001663 ORTHO05D005717 4.7e-160 568.5 376 79.5
Hund26324 Selenicereus undatus HOM05D001663 ORTHO05D005717 2.0e-155 553.1 384 73.2
Sc18g0007560 Simmondsia chinensis HOM05D001663 ORTHO05D005717 2.1e-152 543.1 377 72.1
ATR0564G349 Amborella trichopoda HOM05D001663 ORTHO05D005717 8.3e-149 531.2 485 58.8
Dinv13062 Davidia involucrata HOM05D001663 ORTHO05D005717 1.0e-146 524.2 339 79.6
AUR62021323 Chenopodium quinoa HOM05D001663 ORTHO05D005717 1.7e-138 496.9 478 57.1
Gohir.A05G268300 Gossypium hirsutum HOM05D001663 ORTHO05D005717 5.4e-132 475.3 312 77.2
Oeu035400.3 Olea europaea HOM05D001663 ORTHO05D005717 1.7e-125 453.8 810 38.5
CDE05G2350 Ceratophyllum demersum HOM05D001663 ORTHO05D005717 1.9e-124 450.3 346 67.1
MBI02_g34272_MAGBIO Magnolia biondii HOM05D001663 ORTHO05D005717 6.0e-123 445.3 311 73.0
HPP92_009232 Vanilla planifolia HOM05D001663 ORTHO05D005717 1.7e-122 443.7 377 60.2
unitig_747.g21547 Utricularia gibba HOM05D001663 ORTHO05D005717 2.0e-118 430.3 479 51.8
Carub.0002s2479 Capsella rubella HOM05D001663 ORTHO05D005717 3.0e-114 416.4 458 52.0
VMungo0647G1200 Vigna mungo HOM05D001663 ORTHO05D005717 1.3e-112 411.0 228 93.0
arahy.Tifrunner.gnm1.ann1.8X036G Arachis hypogaea HOM05D001663 ORTHO05D005717 1.6e-112 410.6 247 85.0
AL2G38170 Arabidopsis lyrata HOM05D001663 ORTHO05D005717 8.1e-112 408.3 452 51.8
CARHR071380 Cardamine hirsuta HOM05D001663 ORTHO05D005717 8.1e-112 408.3 448 50.7
Sp5g33060 Schrenkiella parvula HOM05D001663 ORTHO05D005717 5.5e-108 395.6 450 50.9
AT1G77890 Arabidopsis thaliana HOM05D001663 ORTHO05D005717 7.9e-107 391.7 452 50.9
BolC6t40206H Brassica oleracea HOM05D001663 ORTHO05D005717 1.3e-106 391.0 456 49.3
arahy.Tifrunner.gnm1.ann1.ZLN6KV Arachis hypogaea HOM05D001663 ORTHO05D005717 8.7e-106 388.3 240 84.6
BraA07t31838Z Brassica rapa HOM05D001663 ORTHO05D005717 2.5e-105 386.7 456 48.7
Aa31LG4G7980 Aethionema arabicum HOM05D001663 ORTHO05D005717 4.8e-104 382.5 471 47.8
BcaB03g15913 Brassica carinata HOM05D001663 ORTHO05D005717 2.0e-102 377.1 456 48.7
Zm00001eb327970 Zea mays HOM05D001663 ORTHO05D005717 2.7e-99 366.7 445 46.5
A07p43160 Brassica napus HOM05D001663 ORTHO05D005717 7.9e-99 365.2 369 53.4
C06p51850 Brassica napus HOM05D001663 ORTHO05D005717 1.0e-98 364.8 375 52.8
Zm00001eb109770 Zea mays HOM05D001663 ORTHO05D005717 2.0e-94 350.5 408 48.5
Os07g0626300 Oryza sativa ssp. japonica HOM05D001663 ORTHO05D005717 1.0e-93 348.2 423 47.8
Pp3c5_11170 Physcomitrium patens HOM05D001663 ORTHO05D005717 1.5e-86 324.3 487 40.7
Thhalv10018451m.g Eutrema salsugineum HOM05D001663 ORTHO05D005717 5.5e-84 315.8 450 45.6
Actinidia33165 Actinidia chinensis HOM05D001663 ORTHO05D005717 1.7e-80 304.3 250 64.4
Mapoly0103s0077 Marchantia polymorpha HOM05D001663 ORTHO05D005717 1.4e-71 274.6 489 36.2
SEGI_08259 Sequoiadendron giganteum HOM05D001663 ORTHO05D005717 6.8e-58 229.2 315 44.1
SEGI_31098 Sequoiadendron giganteum HOM05D001663 ORTHO05D005717 6.5e-53 212.6 221 52.9
MBI02_g34271_MAGBIO Magnolia biondii HOM05D001663 ORTHO05D005717 1.9e-52 211.1 176 64.8
BcaC08g47627 Brassica carinata HOM05D001663 ORTHO05D005717 2.9e-45 187.2 203 48.8
AagrBONN_evm.TU.Sc2ySwM_344.1096 Anthoceros agrestis HOM05D001663 ORTHO05D005717 1.6e-43 181.4 431 32.7
CBR_g4197 Chara braunii HOM05D001663 ORTHO05D005717 1.6e-38 164.9 513 29.0
Atru.chr13.1296 Acer truncatum HOM05D001663 ORTHO05D005717 3.0e-37 160.6 102 77.5
Actinidia33166 Actinidia chinensis HOM05D001663 ORTHO05D005717 1.4e-31 141.7 106 67.0
CDE05G1781 Ceratophyllum demersum HOM05D001663 ORTHO05D005717 1.6e-19 101.7 90 56.7
Dinv13063 Davidia involucrata HOM05D001663 ORTHO05D005717 3.0e-13 80.9 62 71.0
Zm00001eb031630 Zea mays HOM05D001663 ORTHO05D005717 3.3e-12 77.4 142 33.1
SEGI_07227 Sequoiadendron giganteum HOM05D001663 ORTHO05D015595 5.8e-09 66.6 84 40.5
HanXRQChr01g0001151 Helianthus annuus HOM05D001663 ORTHO05D005717 9.3e-07 59.3 141 36.9


User provided reference genes

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