Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.008G165800 Phaseolus vulgaris HOM05D006768 ORTHO05D008436 1.8e-46 189.1 113 100.0
Glyma.14G163200 Glycine max HOM05D006768 ORTHO05D008436 5.7e-40 167.5 113 92.9
Glyma.13G082200 Glycine max HOM05D006768 ORTHO05D008436 2.2e-39 165.6 113 91.2
arahy.Tifrunner.gnm1.ann1.BFT67J Arachis hypogaea HOM05D006768 ORTHO05D008436 2.4e-38 162.2 114 83.3
arahy.Tifrunner.gnm1.ann1.V4QE5E Arachis hypogaea HOM05D006768 ORTHO05D008436 2.4e-38 162.2 114 83.3
VMungo0647G1658 Vigna mungo HOM05D006768 ORTHO05D008436 7.0e-38 160.6 106 92.5
CANSAT25G0473 Cannabis sativa HOM05D006768 ORTHO05D008436 5.0e-36 154.5 114 87.7
Lalb_Chr04g0253331 Lupinus albus HOM05D006768 ORTHO05D008436 8.5e-36 153.7 114 82.5
Psat2g079320 Pisum sativum HOM05D006768 ORTHO05D008436 4.2e-35 151.4 113 78.8
TPR.G8510 Trifolium pratense HOM05D006768 ORTHO05D008436 9.5e-35 150.2 113 76.1
Medtr5g059100 Medicago truncatula HOM05D006768 ORTHO05D008436 5.2e-33 144.4 107 79.4
CSS0001196 Camellia sinensis var. sinensis HOM05D006768 ORTHO05D008436 6.8e-33 144.1 114 75.4
Ciclev10002911m.g Citrus clementina HOM05D006768 ORTHO05D008436 6.8e-33 144.1 113 70.8
Nitab4.5_0010364g0020 Nicotiana tabacum HOM05D006768 ORTHO05D008436 1.2e-32 143.3 114 69.3
BraA03t12013Z Brassica rapa HOM05D006768 ORTHO05D008436 1.5e-32 142.9 114 75.4
EL10Ac1g00013 Beta vulgaris HOM05D006768 ORTHO05D008436 2.6e-32 142.1 113 64.6
Prupe.1G502600 Prunus persica HOM05D006768 ORTHO05D008436 3.4e-32 141.7 114 74.6
BcaB01g02871 Brassica carinata HOM05D006768 ORTHO05D008436 4.4e-32 141.4 114 69.3
FvH4_2g26460 Fragaria vesca HOM05D006768 ORTHO05D008436 4.4e-32 141.4 114 73.7
RcHm_v2.0_Chr6g0295131 Rosa chinensis HOM05D006768 ORTHO05D008436 4.4e-32 141.4 114 73.7
CARHR259330 Cardamine hirsuta HOM05D006768 ORTHO05D008436 7.5e-32 140.6 114 78.9
Hma1.2p1_0009F.1_g006320 Hydrangea macrophylla HOM05D006768 ORTHO05D008436 7.5e-32 140.6 117 64.1
Thhalv10029535m.g Eutrema salsugineum HOM05D006768 ORTHO05D008436 1.3e-31 139.8 114 70.2
Manes.02G160800 Manihot esculenta HOM05D006768 ORTHO05D008436 1.3e-31 139.8 114 66.7
Manes.18G074850 Manihot esculenta HOM05D006768 ORTHO05D008436 1.3e-31 139.8 114 66.7
Solyc11g013100.2 Solanum lycopersicum HOM05D006768 ORTHO05D008436 1.3e-31 139.8 114 65.8
Sopen11g008160 Solanum pennellii HOM05D006768 ORTHO05D008436 1.3e-31 139.8 114 65.8
CAN.G342.8 Capsicum annuum HOM05D006768 ORTHO05D008436 1.7e-31 139.4 114 65.8
Sp6g09840 Schrenkiella parvula HOM05D006768 ORTHO05D008436 1.7e-31 139.4 115 75.7
BcaC01g04777 Brassica carinata HOM05D006768 ORTHO05D008436 2.2e-31 139.0 114 75.4
BolC3t15699H Brassica oleracea HOM05D006768 ORTHO05D008436 2.2e-31 139.0 114 75.4
CiPaw.06G026900 Carya illinoinensis HOM05D006768 ORTHO05D008436 2.2e-31 139.0 114 68.4
FAN24G3387 Fragaria x ananassa HOM05D006768 ORTHO05D008436 2.2e-31 139.0 114 72.8
Sed0001868 Sechium edule HOM05D006768 ORTHO05D008436 2.2e-31 139.0 116 64.7
Lj1g0025240 Lotus japonicus HOM05D006768 ORTHO05D008436 4.9e-31 137.9 115 73.9
MELO3C011580.2 Cucumis melo HOM05D006768 ORTHO05D008436 6.3e-31 137.5 116 63.8
ClCG08G005390 Citrullus lanatus HOM05D006768 ORTHO05D008436 8.3e-31 137.1 116 63.8
PGR044G1209 Punica granatum HOM05D006768 ORTHO05D008436 8.3e-31 137.1 114 64.9
THA.LOC104817125 Tarenaya hassleriana HOM05D006768 ORTHO05D008436 8.3e-31 137.1 114 77.2
MSTRG.25394 Avicennia marina HOM05D006768 ORTHO05D008436 1.1e-30 136.7 113 65.5
Hma1.2p1_0073F.1_g038410 Hydrangea macrophylla HOM05D006768 ORTHO05D008436 1.1e-30 136.7 113 69.0
AUR62004718 Chenopodium quinoa HOM05D006768 ORTHO05D008436 1.4e-30 136.3 114 69.3
Gohir.D05G235400 Gossypium hirsutum HOM05D006768 ORTHO05D008436 1.8e-30 136.0 113 62.8
AT4G08230 Arabidopsis thaliana HOM05D006768 ORTHO05D008436 2.4e-30 135.6 114 78.1
Potri.005G174700 Populus trichocarpa HOM05D006768 ORTHO05D008436 2.4e-30 135.6 114 65.8
CAN.G2.37 Capsicum annuum HOM05D006768 ORTHO05D008436 3.1e-30 135.2 114 64.0
Lsat_1_v5_gn_4_25061 Lactuca sativa HOM05D006768 ORTHO05D008436 3.1e-30 135.2 113 68.1
Hund27041 Selenicereus undatus HOM05D006768 ORTHO05D008436 3.1e-30 135.2 113 69.0
Migut.C01157 Erythranthe guttata HOM05D006768 ORTHO05D008436 4.1e-30 134.8 114 71.1
PGSC0003DMG400014092 Solanum tuberosum HOM05D006768 ORTHO05D008436 4.1e-30 134.8 114 63.2
CSS0006116 Camellia sinensis var. sinensis HOM05D006768 ORTHO05D008436 5.4e-30 134.4 114 63.2
COL.COLO4_38328 Corchorus olitorius HOM05D006768 ORTHO05D008436 5.4e-30 134.4 114 65.8
Thecc.08G120600 Theobroma cacao HOM05D006768 ORTHO05D008436 7.0e-30 134.0 113 65.5
Cpa.g.sc36.24 Carica papaya HOM05D006768 ORTHO05D008436 9.2e-30 133.7 113 66.4
Gohir.A05G233000 Gossypium hirsutum HOM05D006768 ORTHO05D008436 9.2e-30 133.7 113 65.5
Potri.002G086600 Populus trichocarpa HOM05D006768 ORTHO05D008436 9.2e-30 133.7 114 64.9
TWI56G0584 Tripterygium wilfordii HOM05D006768 ORTHO05D008436 9.2e-30 133.7 113 67.3
Duzib116G0009 Durio zibethinus HOM05D006768 ORTHO05D008436 1.2e-29 133.3 112 62.5
Gohir.D02G081200 Gossypium hirsutum HOM05D006768 ORTHO05D008436 1.2e-29 133.3 114 62.3
Gorai.005G090800 Gossypium raimondii HOM05D006768 ORTHO05D008436 1.6e-29 132.9 112 61.6
AL6G41870 Arabidopsis lyrata HOM05D006768 ORTHO05D008436 2.0e-29 132.5 114 76.3
Carub.0006s2676 Capsella rubella HOM05D006768 ORTHO05D008436 3.5e-29 131.7 114 74.6
FAN15G1404 Fragaria x ananassa HOM05D006768 ORTHO05D008436 4.5e-29 131.3 109 72.5
vmacro00812 Vaccinium macrocarpon HOM05D006768 ORTHO05D008436 5.9e-29 131.0 114 62.3
HanXRQChr08g0223691 Helianthus annuus HOM05D006768 ORTHO05D008436 7.8e-29 130.6 114 63.2
RhsimUnG0095400 Rhododendron simsii HOM05D006768 ORTHO05D008436 7.8e-29 130.6 107 71.0
Nitab4.5_0005357g0030 Nicotiana tabacum HOM05D006768 ORTHO05D008436 1.0e-28 130.2 108 66.7
TWI12G0503 Tripterygium wilfordii HOM05D006768 ORTHO05D008436 1.0e-28 130.2 114 79.8
A03p28000 Brassica napus HOM05D006768 ORTHO05D008436 1.3e-28 129.8 108 75.0
C03p33820 Brassica napus HOM05D006768 ORTHO05D008436 1.3e-28 129.8 108 75.0
Gohir.A02G074000 Gossypium hirsutum HOM05D006768 ORTHO05D008436 1.3e-28 129.8 115 66.1
Atru.chr13.1393 Acer truncatum HOM05D006768 ORTHO05D008436 1.7e-28 129.4 107 70.1
Cc10_g11060 Coffea canephora HOM05D006768 ORTHO05D008436 1.7e-28 129.4 108 69.4
Duzib041G0323 Durio zibethinus HOM05D006768 ORTHO05D008436 1.7e-28 129.4 113 64.6
Dinv27347 Davidia involucrata HOM05D006768 ORTHO05D008436 2.3e-28 129.0 106 65.1
Aqoxy6G00156 Aquilegia oxysepala HOM05D006768 ORTHO05D008436 2.9e-28 128.6 113 61.9
unitig_21.g20584 Utricularia gibba HOM05D006768 ORTHO05D008436 3.8e-28 128.3 113 65.5
HanXRQChr16g0527071 Helianthus annuus HOM05D006768 ORTHO05D008436 5.0e-28 127.9 113 64.6
CsaV3_6G003570 Cucumis sativus L. HOM05D006768 ORTHO05D008436 2.5e-27 125.6 110 62.7
GSVIVG01008909001 Vitis vinifera HOM05D006768 ORTHO05D008436 2.5e-27 125.6 122 59.0
ECA234G1078 Erigeron canadensis HOM05D006768 ORTHO05D008436 3.3e-27 125.2 112 68.8
TAR625G0411 Trochodendron aralioides HOM05D006768 ORTHO05D008436 9.5e-27 123.6 112 61.6
PSO170G4432 Papaver somniferum HOM05D006768 ORTHO05D008436 2.1e-26 122.5 114 64.9
PSO528G0064 Papaver somniferum HOM05D006768 ORTHO05D008436 2.1e-26 122.5 114 64.9
THA.LOC104806813 Tarenaya hassleriana HOM05D006768 ORTHO05D008436 2.1e-26 122.5 113 73.5
SalBow7G0914 Salvia bowleyana HOM05D006768 ORTHO05D008436 2.8e-26 122.1 107 60.7
SalBow7G4665 Salvia bowleyana HOM05D006768 ORTHO05D008436 2.8e-26 122.1 107 60.7
ECA233G5727 Erigeron canadensis HOM05D006768 ORTHO05D008436 4.7e-26 121.3 113 62.8
MBI06_g02573_MAGBIO Magnolia biondii HOM05D006768 ORTHO05D008436 8.0e-26 120.6 106 66.0
Gorai.009G243700 Gossypium raimondii HOM05D006768 ORTHO05D008436 1.4e-25 119.8 108 58.3
QL09p036660 Quercus lobata HOM05D006768 ORTHO05D008436 3.0e-25 118.6 113 63.7
Os03g0263700 Oryza sativa ssp. japonica HOM05D006768 ORTHO05D008436 4.0e-25 118.2 114 71.9
Sc23g0000800 Simmondsia chinensis HOM05D006768 ORTHO05D008436 4.0e-25 118.2 103 68.9
Sabra02G0068000 Salix brachista HOM05D006768 ORTHO05D008436 5.2e-25 117.9 108 62.0
MD08G1168400 Malus domestica HOM05D006768 ORTHO05D008436 2.0e-24 115.9 95 70.5
Haze_00489 Corylus avellana HOM05D006768 ORTHO05D008436 2.6e-24 115.5 65 87.7
Zm00001eb398080 Zea mays HOM05D006768 ORTHO05D008436 3.4e-24 115.2 114 69.3
SGA_v2.0_scaffold24G10479 Striga asiatica HOM05D006768 ORTHO05D008436 1.3e-23 113.2 114 52.6
TAR376G1039 Trochodendron aralioides HOM05D000018 ORTHO05D001920 8.3e-23 110.5 103 61.2
Zm00001eb011610 Zea mays HOM05D006768 ORTHO05D008436 1.8e-22 109.4 114 68.4
CDE04G1345 Ceratophyllum demersum HOM05D006768 ORTHO05D008436 3.2e-22 108.6 112 57.1
CDE08G1444 Ceratophyllum demersum HOM05D006768 ORTHO05D008436 5.4e-22 107.8 112 62.5
HPP92_011177 Vanilla planifolia HOM05D006768 ORTHO05D008436 7.0e-22 107.5 113 59.3
FAN20G0213 Fragaria x ananassa HOM05D000048 ORTHO05D004674 2.7e-21 105.5 101 66.3
Ca_28007_v3 Cicer arietinum L. HOM05D006768 ORTHO05D008436 3.5e-21 105.1 81 81.5
Eucgr.F04346 Eucalyptus grandis HOM05D006768 ORTHO05D008436 3.5e-21 105.1 90 68.9
Sabra05G0131800 Salix brachista HOM05D006768 ORTHO05D008436 8.6e-20 100.5 97 58.8
CSS0018251 Camellia sinensis var. sinensis HOM05D006768 ORTHO05D008436 1.5e-19 99.8 64 78.1
FAN27G1871 Fragaria x ananassa HOM05D000048 ORTHO05D004674 2.5e-19 99.0 57 86.0
SEGI_37020 Sequoiadendron giganteum HOM05D006768 ORTHO05D008436 8.9e-17 90.5 112 53.6
Aa31LG9G14330 Aethionema arabicum HOM05D006768 ORTHO05D008436 3.2e-14 82.0 58 69.0
AUR62023633 Chenopodium quinoa HOM05D006768 ORTHO05D008436 2.7e-13 79.0 76 68.4
Mapoly0043s0020 Marchantia polymorpha HOM05D006768 ORTHO05D008436 1.1e-11 73.6 115 50.4
Nitab4.5_0001142g0120 Nicotiana tabacum HOM05D006768 ORTHO05D008436 5.6e-11 71.2 105 44.8
AagrBONN_evm.TU.Sc2ySwM_344.1603 Anthoceros agrestis HOM05D006768 ORTHO05D008436 7.3e-11 70.9 104 53.8
Peaxi162Scf00000g61010 Petunia axillaris HOM05D006768 ORTHO05D008436 9.5e-11 70.5 76 56.6
Pp3c13_12030 Physcomitrium patens HOM05D006768 ORTHO05D008436 1.5e-08 63.2 109 47.7
SMO308G0024 Selaginella moellendorffii HOM05D006768 ORTHO05D008436 1.9e-06 56.2 114 49.1


User provided reference genes

Program Settings