Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.008G161900 Phaseolus vulgaris HOM05D006789 ORTHO05D008460 2.1e-112 409.1 214 100.0
VMungo0647G0732 Vigna mungo HOM05D006789 ORTHO05D008460 2.2e-101 372.5 210 91.4
Glyma.06G315000 Glycine max HOM05D006789 ORTHO05D008460 3.0e-90 335.5 211 83.9
Lj3g0008710 Lotus japonicus HOM05D006789 ORTHO05D008460 3.1e-87 325.5 201 81.6
Glyma.04G129000 Glycine max HOM05D006789 ORTHO05D008460 4.1e-87 325.1 203 84.7
Lalb_Chr15g0079361 Lupinus albus HOM05D006789 ORTHO05D008460 3.8e-85 318.5 205 82.0
TPR.G25521 Trifolium pratense HOM05D006789 ORTHO05D008460 1.8e-82 309.7 200 81.0
arahy.Tifrunner.gnm1.ann1.KMQ9TB Arachis hypogaea HOM05D006789 ORTHO05D008460 1.1e-81 307.0 205 78.5
arahy.Tifrunner.gnm1.ann1.G6AZCI Arachis hypogaea HOM05D006789 ORTHO05D008460 4.3e-81 305.1 205 78.0
Medtr3g006790 Medicago truncatula HOM05D006789 ORTHO05D008460 8.2e-80 300.8 201 79.1
Dinv24597 Davidia involucrata HOM05D006789 ORTHO05D008460 1.4e-76 290.0 199 75.4
Gorai.N006500 Gossypium raimondii HOM05D006789 ORTHO05D008460 9.4e-76 287.3 203 72.4
Gohir.A06G170900 Gossypium hirsutum HOM05D006789 ORTHO05D008460 1.6e-75 286.6 203 72.4
Atru.chr3.2036 Acer truncatum HOM05D006789 ORTHO05D008460 3.6e-75 285.4 203 72.4
Gohir.D06G178700 Gossypium hirsutum HOM05D006789 ORTHO05D008460 3.6e-75 285.4 203 71.9
Ciclev10029282m.g Citrus clementina HOM05D006789 ORTHO05D008460 6.1e-75 284.6 205 72.7
Hma1.2p1_0892F.1_g233210 Hydrangea macrophylla HOM05D006789 ORTHO05D008460 2.3e-74 282.7 199 73.9
TWI38G1707 Tripterygium wilfordii HOM05D006789 ORTHO05D008460 2.3e-74 282.7 208 70.2
Thecc.10G129500 Theobroma cacao HOM05D006789 ORTHO05D008460 1.5e-73 280.0 214 69.2
Duzib106G0468 Durio zibethinus HOM05D006789 ORTHO05D008460 1.3e-72 276.9 204 71.6
TAR633G0905 Trochodendron aralioides HOM05D006789 ORTHO05D008460 1.1e-71 273.9 200 70.0
PGR044G1098 Punica granatum HOM05D006789 ORTHO05D008460 1.4e-71 273.5 207 67.6
Haze_03403 Corylus avellana HOM05D006789 ORTHO05D008460 9.1e-71 270.8 228 64.9
CANSAT56G4131 Cannabis sativa HOM05D006789 ORTHO05D008460 1.3e-69 266.9 207 66.7
CsaV3_5G034990 Cucumis sativus L. HOM05D006789 ORTHO05D008460 1.7e-69 266.5 200 69.5
Potri.008G012100 Populus trichocarpa HOM05D006789 ORTHO05D008460 3.8e-69 265.4 204 68.6
CiPaw.14G037500 Carya illinoinensis HOM05D006789 ORTHO05D008460 6.5e-69 264.6 202 69.8
GSVIVG01027313001 Vitis vinifera HOM05D006789 ORTHO05D008460 6.5e-69 264.6 181 72.9
MELO3C012309.2 Cucumis melo HOM05D006789 ORTHO05D008460 8.5e-69 264.2 200 68.5
DCAR_006626 Daucus carota HOM05D006789 ORTHO05D008460 5.5e-68 261.5 208 67.3
Eucgr.J00312 Eucalyptus grandis HOM05D006789 ORTHO05D008460 5.5e-68 261.5 198 68.7
Sabra08G0007400 Salix brachista HOM05D006789 ORTHO05D008460 5.5e-68 261.5 206 65.5
SalBow4G0168 Salvia bowleyana HOM05D006789 ORTHO05D008460 5.5e-68 261.5 217 63.6
Oeu013184.1 Olea europaea HOM05D006789 ORTHO05D008460 7.2e-68 261.2 211 64.9
Manes.10G064901 Manihot esculenta HOM05D006789 ORTHO05D008460 2.1e-67 259.6 204 67.6
SGA_v2.0_scaffold196G40989 Striga asiatica HOM05D006789 ORTHO05D008460 2.1e-67 259.6 177 71.2
ClCG05G022140 Citrullus lanatus HOM05D006789 ORTHO05D008460 3.6e-67 258.8 206 66.0
MBI19_g19122_MAGBIO Magnolia biondii HOM05D006789 ORTHO05D008460 3.6e-67 258.8 204 65.7
Peaxi162Scf00217g00626 Petunia axillaris HOM05D006789 ORTHO05D008460 3.6e-67 258.8 201 66.7
MSTRG.5084 Avicennia marina HOM05D006789 ORTHO05D008460 4.7e-67 258.5 212 65.1
Prupe.2G061000 Prunus persica HOM05D006789 ORTHO05D008460 6.1e-67 258.1 210 67.1
vmacro13786 Vaccinium macrocarpon HOM05D006789 ORTHO05D008460 6.1e-67 258.1 226 64.2
Rhsim07G0072100 Rhododendron simsii HOM05D006789 ORTHO05D008460 5.2e-66 255.0 217 65.0
Lsat_1_v5_gn_2_28141 Lactuca sativa HOM05D006789 ORTHO05D008460 6.7e-66 254.6 200 66.5
SGA_v2.0_scaffold196G40996 Striga asiatica HOM05D006789 ORTHO05D008460 1.1e-65 253.8 177 70.1
HanXRQChr06g0181521 Helianthus annuus HOM05D006789 ORTHO05D008460 2.6e-65 252.7 200 66.5
Solyc10g039380.2 Solanum lycopersicum HOM05D006789 ORTHO05D008460 7.5e-65 251.1 184 69.0
Sopen10g012840 Solanum pennellii HOM05D006789 ORTHO05D008460 2.2e-64 249.6 184 68.5
MD02G1265000 Malus domestica HOM05D006789 ORTHO05D008460 8.2e-64 247.7 207 64.3
A10p31220 Brassica napus HOM05D006789 ORTHO05D008460 3.1e-63 245.7 210 61.9
BraA10t45166Z Brassica rapa HOM05D006789 ORTHO05D008460 3.1e-63 245.7 210 61.9
EL10Ac4g08777 Beta vulgaris HOM05D006789 ORTHO05D008460 5.3e-63 245.0 203 61.1
Sed0016797 Sechium edule HOM05D006789 ORTHO05D008460 9.1e-63 244.2 203 64.5
C09p71840 Brassica napus HOM05D006789 ORTHO05D008460 1.2e-62 243.8 210 61.4
BolC9t59933H Brassica oleracea HOM05D006789 ORTHO05D008460 1.6e-62 243.4 210 61.4
BcaC06g32200 Brassica carinata HOM05D006789 ORTHO05D008460 2.0e-62 243.0 209 60.3
Gorai.010G208300 Gossypium raimondii HOM05D006789 ORTHO05D008460 2.7e-62 242.7 156 76.9
Gorai.N006000 Gossypium raimondii HOM05D006789 ORTHO05D008460 4.5e-62 241.9 153 77.8
Sp6g37890 Schrenkiella parvula HOM05D006789 ORTHO05D008460 5.9e-62 241.5 210 60.0
COL.COLO4_28906 Corchorus olitorius HOM05D006789 ORTHO05D008460 7.7e-62 241.1 156 76.9
Thhalv10014633m.g Eutrema salsugineum HOM05D006789 ORTHO05D008460 1.0e-61 240.7 212 59.4
Nn2g14746 Nelumbo nucifera HOM05D006789 ORTHO05D008460 2.9e-61 239.2 177 68.4
Hund00694 Selenicereus undatus HOM05D006789 ORTHO05D008460 2.9e-61 239.2 200 62.0
THA.LOC104826955 Tarenaya hassleriana HOM05D006789 ORTHO05D008460 5.0e-61 238.4 213 59.6
AT5G04910 Arabidopsis thaliana HOM05D006789 ORTHO05D008460 1.9e-60 236.5 216 57.4
ECA238G4254 Erigeron canadensis HOM05D006789 ORTHO05D008460 1.9e-60 236.5 205 61.5
Sc22g0002280 Simmondsia chinensis HOM05D006789 ORTHO05D001455 1.9e-60 236.5 198 62.6
Carub.0006s0385 Capsella rubella HOM05D006789 ORTHO05D008460 3.2e-60 235.7 209 59.8
RcHm_v2.0_Chr1g0331321 Rosa chinensis HOM05D006789 ORTHO05D008460 3.2e-60 235.7 215 60.0
AL6G14600 Arabidopsis lyrata HOM05D006789 ORTHO05D008460 7.2e-60 234.6 216 57.4
Actinidia19614 Actinidia chinensis HOM05D000583 ORTHO05D000442 9.4e-60 234.2 172 71.5
Aqoxy1G00021 Aquilegia oxysepala HOM05D006789 ORTHO05D008460 2.1e-59 233.0 176 67.0
Hma1.2p1_0892F.1_g233220 Hydrangea macrophylla HOM05D006789 ORTHO05D008460 1.0e-58 230.7 150 78.0
CSS0000309 Camellia sinensis var. sinensis HOM05D006789 ORTHO05D008460 1.4e-58 230.3 280 50.0
PSO339G2606 Papaver somniferum HOM05D006789 ORTHO05D008460 1.4e-58 230.3 199 59.3
Os01g0265700 Oryza sativa ssp. japonica HOM05D006789 ORTHO05D008460 3.0e-58 229.2 177 65.5
FvH4_7g05010 Fragaria vesca HOM05D006789 ORTHO05D008460 6.8e-58 228.0 201 60.7
Cc02_g32010 Coffea canephora HOM05D006789 ORTHO05D008460 8.8e-58 227.6 155 71.6
PSO384G0303 Papaver somniferum HOM05D006789 ORTHO05D008460 3.4e-57 225.7 200 58.5
CDE08G0307 Ceratophyllum demersum HOM05D006789 ORTHO05D008460 4.4e-57 225.3 192 63.0
Nitab4.5_0004033g0070 Nicotiana tabacum HOM05D006789 ORTHO05D008460 4.4e-57 225.3 155 72.3
FAN06G2149 Fragaria x ananassa HOM05D006789 ORTHO05D008460 5.7e-57 224.9 207 58.9
Gohir.A06G170906 Gossypium hirsutum HOM05D006789 ORTHO05D008460 7.5e-57 224.6 154 73.4
Zm00001eb128210 Zea mays HOM05D006789 ORTHO05D008460 1.1e-55 220.7 174 64.9
Gohir.D06G178832 Gossypium hirsutum HOM05D006789 ORTHO05D008460 7.0e-55 218.0 156 70.5
Nitab4.5_0002156g0010 Nicotiana tabacum HOM05D006789 ORTHO05D008460 9.1e-55 217.6 154 70.8
Aa31LG11G5790 Aethionema arabicum HOM05D006789 ORTHO05D008460 2.0e-54 216.5 178 62.9
Lj7C491T7 Lonicera japonica HOM05D006789 ORTHO05D008460 2.0e-54 216.5 146 75.3
Sed0010043 Sechium edule HOM05D006789 ORTHO05D008460 2.7e-54 216.1 200 60.5
Migut.N01877 Erythranthe guttata HOM05D006789 ORTHO05D008460 1.3e-53 213.8 209 57.9
SEGI_32817 Sequoiadendron giganteum HOM05D006789 ORTHO05D008460 1.2e-51 207.2 156 64.1
MBI06_g23363_MAGBIO Magnolia biondii HOM05D006789 ORTHO05D008460 2.3e-50 203.0 148 68.9
FAN03G1759 Fragaria x ananassa HOM05D006789 ORTHO05D008460 3.0e-50 202.6 222 54.1
ATR0068G087 Amborella trichopoda HOM05D006789 ORTHO05D008460 2.6e-49 199.5 148 65.5
unitig_26.g9495 Utricularia gibba HOM05D006789 ORTHO05D008460 5.7e-49 198.4 207 52.7
Psat5g230200 Pisum sativum HOM05D006789 ORTHO05D008460 2.2e-48 196.4 119 84.9
Carub.0010s0003 Capsella rubella HOM05D006789 ORTHO05D008460 5.4e-47 191.8 163 60.7
MBI05_g14944_MAGBIO Magnolia biondii HOM05D006789 ORTHO05D008460 7.0e-47 191.4 145 66.2
FAN01G0280 Fragaria x ananassa HOM05D006789 ORTHO05D008460 5.0e-45 185.3 202 54.5
AUR62014306 Chenopodium quinoa HOM05D006789 ORTHO05D008460 4.1e-39 165.6 185 50.8
Ca_14025_v3 Cicer arietinum L. HOM05D006789 ORTHO05D008460 5.4e-39 165.2 114 75.4
Actinidia29655 Actinidia chinensis HOM05D006789 ORTHO05D008460 3.0e-37 159.5 195 51.8
Pp3c10_8520 Physcomitrium patens HOM05D006789 ORTHO05D008460 7.3e-36 154.8 209 42.6
Cfa010449 Carpinus fangiana HOM05D006789 ORTHO05D008460 9.5e-36 154.5 117 70.1
Gorai.010G208600 Gossypium raimondii HOM05D006789 ORTHO05D008460 6.8e-34 148.3 143 60.1
SMO364G0543 Selaginella moellendorffii HOM05D006789 ORTHO05D008460 3.2e-31 139.4 179 45.3
Mapoly0023s0087 Marchantia polymorpha HOM05D006789 ORTHO05D008460 2.7e-30 136.3 179 42.5
CARHR208350 Cardamine hirsuta HOM05D006789 ORTHO05D008460 3.5e-30 136.0 87 74.7
Phvul.005G010900 Phaseolus vulgaris HOM05D006789 ORTHO05D008460 3.9e-29 132.5 109 71.6
TAR633G1630 Trochodendron aralioides HOM05D006789 ORTHO05D008460 4.3e-28 129.0 81 79.0
TAR629G1007 Trochodendron aralioides HOM05D001508 ORTHO05D008460 1.2e-27 127.5 79 79.7
SMO353G0288 Selaginella moellendorffii HOM05D006789 ORTHO05D008460 6.8e-26 121.7 170 44.1
Cfa005731 Carpinus fangiana HOM05D012552 ORTHO05D018926 2.5e-20 103.2 91 60.4
Cfa006091 Carpinus fangiana HOM05D006789 ORTHO05D008460 2.8e-19 99.8 84 64.3
TAR636G3403 Trochodendron aralioides HOM05D006789 ORTHO05D008460 2.8e-19 99.8 71 70.4
CBR_g54451 Chara braunii HOM05D003248 ORTHO05D000301 7.6e-17 91.7 234 29.1
BcaB03g15210 Brassica carinata HOM05D006789 ORTHO05D008460 9.9e-17 91.3 74 63.5
Cfa010304 Carpinus fangiana HOM05D012552 ORTHO05D018926 7.3e-12 75.1 94 52.1
SHI21242 Sapria himalayana HOM05D006789 ORTHO05D008460 2.1e-11 73.6 56 62.5
Cre16.g683483 Chlamydomonas reinhardtii HOM05D006789 ORTHO05D008460 6.2e-11 72.0 103 37.9
AUR62034099 Chenopodium quinoa HOM05D006789 ORTHO05D008460 1.4e-10 70.9 61 59.0
SHI05402 Sapria himalayana HOM05D005149 ORTHO05D006251 2.0e-09 67.0 66 50.0
MCO03G486 Micromonas commoda HOM05D006789 ORTHO05D008460 7.8e-06 55.1 98 34.7


User provided reference genes

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