Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.008G161700 Phaseolus vulgaris HOM05D006792 ORTHO05D008489 2.3e-60 235.3 118 100.0
Phvul.L001959 Phaseolus vulgaris HOM05D006792 ORTHO05D008489 1.9e-54 215.7 124 88.7
VMungo0720G1195 Vigna mungo HOM05D006792 ORTHO05D008489 2.7e-48 195.3 149 70.5
Glyma.20G204600 Glycine max HOM05D006792 ORTHO05D008489 8.6e-47 190.3 123 82.9
Glyma.09G029200 Glycine max HOM05D006792 ORTHO05D008489 2.2e-42 175.6 124 75.8
Psat6g128400 Pisum sativum HOM05D006792 ORTHO05D008489 2.2e-42 175.6 127 70.9
Lj5g0003340 Lotus japonicus HOM05D006792 ORTHO05D008489 6.4e-42 174.1 113 77.9
TPR.G28895 Trifolium pratense HOM05D006792 ORTHO05D008489 1.1e-41 173.3 127 72.4
Medtr1g075100 Medicago truncatula HOM05D006792 ORTHO05D008489 2.4e-41 172.2 128 70.3
Ca_09830_v3 Cicer arietinum L. HOM05D002720 ORTHO05D002901 3.2e-41 171.8 130 66.2
Lalb_Chr06g0172721 Lupinus albus HOM05D006792 ORTHO05D008489 4.1e-41 171.4 120 73.3
arahy.Tifrunner.gnm1.ann1.LP5K48 Arachis hypogaea HOM05D006792 ORTHO05D008489 2.1e-40 169.1 115 73.0
COL.COLO4_26447 Corchorus olitorius HOM05D006792 ORTHO05D008489 2.7e-40 168.7 112 75.9
arahy.Tifrunner.gnm1.ann1.LDJ6K5 Arachis hypogaea HOM05D006792 ORTHO05D008489 6.0e-40 167.5 115 73.0
Nitab4.5_0000074g0180 Nicotiana tabacum HOM05D006792 ORTHO05D008489 7.8e-40 167.2 120 70.0
Nitab4.5_0009129g0010 Nicotiana tabacum HOM05D006792 ORTHO05D008489 7.8e-40 167.2 123 69.1
Eucgr.L00645 Eucalyptus grandis HOM05D006792 ORTHO05D008489 1.0e-39 166.8 116 75.9
CAN.G1110.13 Capsicum annuum HOM05D006792 ORTHO05D008489 1.3e-39 166.4 123 68.3
Gohir.A06G015700 Gossypium hirsutum HOM05D006792 ORTHO05D008489 2.3e-39 165.6 112 74.1
Manes.10G083100 Manihot esculenta HOM05D006792 ORTHO05D008489 2.3e-39 165.6 120 73.3
Potri.014G035300 Populus trichocarpa HOM05D006792 ORTHO05D008489 2.3e-39 165.6 113 72.6
CiPaw.15G064100 Carya illinoinensis HOM05D006792 ORTHO05D008489 3.0e-39 165.2 113 73.5
Prupe.1G390300 Prunus persica HOM05D006792 ORTHO05D008489 3.9e-39 164.9 125 71.2
Solyc10g006520.3 Solanum lycopersicum HOM05D006792 ORTHO05D008489 3.9e-39 164.9 123 68.3
Sopen10g002470 Solanum pennellii HOM05D006792 ORTHO05D008489 3.9e-39 164.9 123 68.3
Atru.chr13.615 Acer truncatum HOM05D006792 ORTHO05D008489 5.1e-39 164.5 116 71.6
Ciclev10002498m.g Citrus clementina HOM05D006792 ORTHO05D008489 5.1e-39 164.5 115 70.4
AT5G06430 Arabidopsis thaliana HOM05D006792 ORTHO05D008489 6.6e-39 164.1 123 69.9
MD15G1036100 Malus domestica HOM05D006792 ORTHO05D008489 6.6e-39 164.1 121 71.1
PGSC0003DMG400014433 Solanum tuberosum HOM05D006792 ORTHO05D008489 6.6e-39 164.1 123 67.5
Peaxi162Scf00324g00610 Petunia axillaris HOM05D006792 ORTHO05D008489 8.6e-39 163.7 123 67.5
Aa31LG5G9340 Aethionema arabicum HOM05D006792 ORTHO05D008489 1.1e-38 163.3 125 68.0
CSS0036679 Camellia sinensis var. sinensis HOM05D006792 ORTHO05D008489 1.5e-38 162.9 119 70.6
Cpa.g.sc376.3 Carica papaya HOM05D006792 ORTHO05D008489 1.5e-38 162.9 122 68.0
AUR62021223 Chenopodium quinoa HOM05D006792 ORTHO05D008489 1.5e-38 162.9 120 67.5
Duzib041G0477 Durio zibethinus HOM05D006792 ORTHO05D008489 1.5e-38 162.9 121 69.4
Actinidia15267 Actinidia chinensis HOM05D006792 ORTHO05D008489 1.9e-38 162.5 122 67.2
CSS0036769 Camellia sinensis var. sinensis HOM05D006792 ORTHO05D008489 1.9e-38 162.5 119 70.6
ClCG08G015590 Citrullus lanatus HOM05D006792 ORTHO05D008489 1.9e-38 162.5 113 70.8
Carub.0006s0531 Capsella rubella HOM05D006792 ORTHO05D008489 2.5e-38 162.2 123 68.3
AUR62016018 Chenopodium quinoa HOM05D006792 ORTHO05D008489 2.5e-38 162.2 120 67.5
Cc10_g03850 Coffea canephora HOM05D006792 ORTHO05D008489 2.5e-38 162.2 124 67.7
Sed0017537 Sechium edule HOM05D006792 ORTHO05D008489 2.5e-38 162.2 120 68.3
Haze_17574 Corylus avellana HOM05D006792 ORTHO05D008489 3.3e-38 161.8 119 69.7
FvH4_2g40760 Fragaria vesca HOM05D006792 ORTHO05D008489 3.3e-38 161.8 125 68.0
FAN15G1697 Fragaria x ananassa HOM05D006792 ORTHO05D008489 3.3e-38 161.8 125 68.0
FAN27G1218 Fragaria x ananassa HOM05D006792 ORTHO05D008489 3.3e-38 161.8 125 68.0
Carub.0006s0578 Capsella rubella HOM05D006792 ORTHO05D008489 5.6e-38 161.0 119 69.7
Dinv35992 Davidia involucrata HOM05D006792 ORTHO05D008489 5.6e-38 161.0 113 71.7
Lj4A777T61 Lonicera japonica HOM05D006792 ORTHO05D008489 5.6e-38 161.0 112 71.4
TWI36G0635 Tripterygium wilfordii HOM05D006792 ORTHO05D008489 5.6e-38 161.0 113 72.6
Gohir.D06G013900 Gossypium hirsutum HOM05D006792 ORTHO05D008489 7.3e-38 160.6 112 72.3
Sc02g0006830 Simmondsia chinensis HOM05D006792 ORTHO05D008489 7.3e-38 160.6 112 71.4
QL02p006151 Quercus lobata HOM05D006792 ORTHO05D008489 9.5e-38 160.2 112 71.4
Thecc.08G014600 Theobroma cacao HOM05D006792 ORTHO05D008489 9.5e-38 160.2 112 71.4
EL10Ac3g05711 Beta vulgaris HOM05D006792 ORTHO05D008489 1.2e-37 159.8 113 69.0
BcaC06g32576 Brassica carinata HOM05D006792 ORTHO05D008489 1.2e-37 159.8 121 69.4
A10p29960 Brassica napus HOM05D006792 ORTHO05D008489 1.6e-37 159.5 121 68.6
BolC9t59782H Brassica oleracea HOM05D006792 ORTHO05D008489 1.6e-37 159.5 121 68.6
CARHR285910 Cardamine hirsuta HOM05D006792 ORTHO05D008489 1.6e-37 159.5 119 68.1
SGA_v2.0_scaffold127G34009 Striga asiatica HOM05D006792 ORTHO05D008489 1.6e-37 159.5 113 71.7
SGA_v2.0_scaffold217G42431 Striga asiatica HOM05D006792 ORTHO05D008489 1.6e-37 159.5 113 71.7
THA.LOC104803789 Tarenaya hassleriana HOM05D006792 ORTHO05D008489 1.6e-37 159.5 114 70.2
Cfa018502 Carpinus fangiana HOM05D006792 ORTHO05D008489 2.1e-37 159.1 121 69.4
SalBow1G1949 Salvia bowleyana HOM05D006792 ORTHO05D008489 2.1e-37 159.1 114 66.7
SalBow6G5080 Salvia bowleyana HOM05D006792 ORTHO05D008489 2.1e-37 159.1 114 66.7
Sp6g36430 Schrenkiella parvula HOM05D006792 ORTHO05D008489 2.1e-37 159.1 123 67.5
Hund23634 Selenicereus undatus HOM05D006792 ORTHO05D008489 2.8e-37 158.7 120 66.7
Ah.07g209080 Amaranthus hybridus HOM05D006792 ORTHO05D008489 3.6e-37 158.3 113 68.1
BcaC06g32375 Brassica carinata HOM05D006792 ORTHO05D008489 3.6e-37 158.3 112 69.6
C09p70370 Brassica napus HOM05D006792 ORTHO05D008489 3.6e-37 158.3 112 69.6
BraA10t45035Z Brassica rapa HOM05D006792 ORTHO05D008489 3.6e-37 158.3 121 67.8
DCAR_008785 Daucus carota HOM05D006792 ORTHO05D008489 3.6e-37 158.3 120 66.7
Duzib093G1402 Durio zibethinus HOM05D006792 ORTHO05D008489 3.6e-37 158.3 112 70.5
Thhalv10014748m.g Eutrema salsugineum HOM05D006792 ORTHO05D008489 3.6e-37 158.3 123 68.3
Rhsim06G0045800 Rhododendron simsii HOM05D006792 ORTHO05D008489 3.6e-37 158.3 120 66.7
Aqoxy5G01393 Aquilegia oxysepala HOM05D006792 ORTHO05D008489 4.7e-37 157.9 122 67.2
Migut.C00611 Erythranthe guttata HOM05D006792 ORTHO05D008489 4.7e-37 157.9 113 70.8
AL6G16520 Arabidopsis lyrata HOM05D006792 ORTHO05D008489 8.1e-37 157.1 119 66.4
PSO170G4587 Papaver somniferum HOM05D006792 ORTHO05D008489 8.1e-37 157.1 122 64.8
PGR031G1503 Punica granatum HOM05D006792 ORTHO05D008489 8.1e-37 157.1 112 69.6
PGR031G1590 Punica granatum HOM05D006792 ORTHO05D008489 8.1e-37 157.1 112 69.6
TAR381G0050 Trochodendron aralioides HOM05D006792 ORTHO05D008489 1.1e-36 156.8 122 68.0
AL6G16990 Arabidopsis lyrata HOM05D006792 ORTHO05D008489 1.4e-36 156.4 119 66.4
MELO3C010894.2 Cucumis melo HOM05D006792 ORTHO05D008489 1.4e-36 156.4 120 65.8
Nn5g30170 Nelumbo nucifera HOM05D006792 ORTHO05D008489 1.8e-36 156.0 113 69.0
TAR625G1025 Trochodendron aralioides HOM05D006792 ORTHO05D008489 1.8e-36 156.0 112 68.8
CsaV3_2G028180 Cucumis sativus L. HOM05D006792 ORTHO05D008489 2.3e-36 155.6 120 65.8
RcHm_v2.0_Chr6g0299831 Rosa chinensis HOM05D006792 ORTHO05D008489 4.0e-36 154.8 115 67.8
GSVIVG01009569001 Vitis vinifera HOM05D006792 ORTHO05D008489 4.0e-36 154.8 123 65.0
Lsat_1_v5_gn_4_124401 Lactuca sativa HOM05D006792 ORTHO05D008489 6.8e-36 154.1 116 63.8
vmacro21565 Vaccinium macrocarpon HOM05D006792 ORTHO05D008489 2.6e-35 152.1 122 63.9
CDE07G1453 Ceratophyllum demersum HOM05D006792 ORTHO05D008489 7.6e-35 150.6 113 66.4
ECA232G0465 Erigeron canadensis HOM05D006792 ORTHO05D008489 1.3e-34 149.8 111 64.0
unitig_19.g30007 Utricularia gibba HOM05D006792 ORTHO05D008489 2.2e-34 149.1 114 62.3
HPP92_009608 Vanilla planifolia HOM05D006792 ORTHO05D008489 6.4e-34 147.5 112 64.3
HanXRQChr09g0268121 Helianthus annuus HOM05D006792 ORTHO05D008489 1.1e-33 146.7 112 60.7
CANSAT56G4245 Cannabis sativa HOM05D006792 ORTHO05D008489 4.1e-33 144.8 102 70.6
Sabra14G0025200 Salix brachista HOM05D006792 ORTHO05D008489 6.0e-32 141.0 100 70.0
SMO184G0001 Selaginella moellendorffii HOM05D006792 ORTHO05D008489 1.8e-28 129.4 112 58.9
Os11g0592900 Oryza sativa ssp. japonica HOM05D006792 ORTHO05D008489 2.9e-26 122.1 111 56.8
Pp3c14_7090 Physcomitrium patens HOM05D006792 ORTHO05D008489 3.8e-26 121.7 112 52.7
ATR0225G026 Amborella trichopoda HOM05D006792 ORTHO05D008489 1.4e-25 119.8 98 61.2
unitig_8.g5015 Utricularia gibba HOM05D006792 ORTHO05D008489 7.1e-25 117.5 105 56.2
Mapoly0072s0021 Marchantia polymorpha HOM05D006792 ORTHO05D008489 1.3e-23 113.2 127 45.7
Zm00001eb167650 Zea mays HOM05D006792 ORTHO05D008489 9.6e-22 107.1 142 43.0
CBR_g61518 Chara braunii HOM05D006792 ORTHO05D008489 4.8e-21 104.8 107 49.5
Phvul.004G112200 Phaseolus vulgaris HOM05D006792 ORTHO05D008489 1.6e-16 89.7 49 91.8
MSTRG.1327 Avicennia marina HOM05D006792 ORTHO05D008489 2.7e-16 89.0 59 74.6
CDE04G1657 Ceratophyllum demersum HOM05D006792 ORTHO05D008489 7.9e-16 87.4 73 58.9
Oeu040900.1 Olea europaea HOM05D006792 ORTHO05D008489 7.9e-16 87.4 59 71.2
Gorai.010G016600 Gossypium raimondii HOM05D006792 ORTHO05D008489 3.9e-15 85.1 59 71.2
Rhsim06G0045400 Rhododendron simsii HOM05D000500 ORTHO05D000367 9.6e-14 80.5 67 59.7
QL03p014147 Quercus lobata HOM05D006792 ORTHO05D008489 2.1e-13 79.3 72 56.9
Eucgr.E03397 Eucalyptus grandis HOM05D006792 ORTHO05D008489 2.8e-13 79.0 66 60.6
Rhsim06G0045200 Rhododendron simsii HOM05D000500 ORTHO05D000367 4.0e-12 75.1 70 55.7
MD08G1060400 Malus domestica HOM05D006792 ORTHO05D008489 2.0e-11 72.8 47 70.2
CARHR206180 Cardamine hirsuta HOM05D006792 ORTHO05D008489 2.3e-07 59.3 48 62.5


User provided reference genes

Program Settings