Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.008G161400 Phaseolus vulgaris HOM05D011778 ORTHO05D012624 3.0e-164 582.4 459 100.0
VMungo0647G2372 Vigna mungo HOM05D011778 ORTHO05D012624 2.6e-83 313.5 461 54.7
Glyma.04G129700 Glycine max HOM05D011778 ORTHO05D012624 4.2e-81 306.2 471 60.1
Glyma.06G315700 Glycine max HOM05D011778 ORTHO05D012624 2.3e-71 273.9 474 57.8
Glyma.04G129900 Glycine max HOM05D011778 ORTHO05D012624 1.0e-39 168.7 158 55.7
Medtr3g007480 Medicago truncatula HOM05D011778 ORTHO05D012624 3.1e-36 157.1 469 45.6
Psat5g229640 Pisum sativum HOM05D011778 ORTHO05D012624 7.7e-35 152.5 465 49.7
Lj3g0018117 Lotus japonicus HOM05D011778 ORTHO05D012624 3.0e-31 140.6 487 45.4
Lalb_Chr18g0049101 Lupinus albus HOM05D011778 ORTHO05D012624 7.5e-30 136.0 476 30.9
Glyma.06G315202 Glycine max HOM05D011778 ORTHO05D012624 5.4e-28 129.8 151 53.6
Lalb_Chr15g0079601 Lupinus albus HOM05D011778 ORTHO05D012624 1.5e-25 121.7 462 29.2
TPR.G25508 Trifolium pratense HOM05D011778 ORTHO05D012624 7.3e-25 119.4 94 57.4
Psat5g230000 Pisum sativum HOM05D011778 ORTHO05D012624 1.2e-22 112.1 117 49.6
arahy.Tifrunner.gnm1.ann1.1W2EAK Arachis hypogaea HOM05D011778 ORTHO05D012624 1.3e-13 82.0 198 34.8
VMungo1127G1301 Vigna mungo HOM05D022505 ORTHO05D012624 6.4e-13 79.7 453 24.9
arahy.Tifrunner.gnm1.ann1.XJN7SY Arachis hypogaea HOM05D011778 ORTHO05D012624 2.4e-12 77.8 201 34.3
TPR.G618 Trifolium pratense HOM05D011778 ORTHO05D012624 2.4e-12 77.8 80 55.0
MD02G1259500 Malus domestica HOM05D000881 ORTHO05D000666 5.4e-12 76.6 201 25.9
FAN06G2536 Fragaria x ananassa HOM05D000881 ORTHO05D000666 1.7e-10 71.6 172 29.1
Potri.008G014000 Populus trichocarpa HOM05D027296 ORTHO05D037401 3.9e-10 70.5 197 31.0
Sabra08G0008700 Salix brachista HOM05D010059 ORTHO05D011752 2.5e-09 67.8 191 30.4
SGA_v2.0_scaffold196G40977 Striga asiatica HOM05D000881 ORTHO05D000666 2.5e-09 67.8 181 30.4
BolC9t59936H Brassica oleracea HOM05D000881 ORTHO05D000666 4.3e-09 67.0 88 36.4
BcaB05g21742 Brassica carinata HOM05D000881 ORTHO05D000666 7.3e-09 66.2 88 39.8
Eucgr.G02656 Eucalyptus grandis HOM05D000881 ORTHO05D000666 7.3e-09 66.2 124 31.5
Manes.10G070600 Manihot esculenta HOM05D000881 ORTHO05D000666 9.5e-09 65.9 151 29.1
A10p31250 Brassica napus HOM05D000881 ORTHO05D000666 1.2e-08 65.5 88 35.2
C09p71870 Brassica napus HOM05D000881 ORTHO05D000666 1.6e-08 65.1 88 35.2
AL6G14570 Arabidopsis lyrata HOM05D000881 ORTHO05D000666 2.1e-08 64.7 88 36.4
BcaNung05155 Brassica carinata HOM05D000881 ORTHO05D000666 2.1e-08 64.7 88 36.4
A03p01910 Brassica napus HOM05D000881 ORTHO05D000666 2.1e-08 64.7 88 36.4
BraA03t09561Z Brassica rapa HOM05D000881 ORTHO05D000666 2.1e-08 64.7 88 36.4
FAN03G3143 Fragaria x ananassa HOM05D000881 ORTHO05D000666 2.1e-08 64.7 197 27.4
Carub.0006s0381 Capsella rubella HOM05D000881 ORTHO05D000666 3.6e-08 63.9 88 37.5
Thhalv10014066m.g Eutrema salsugineum HOM05D000881 ORTHO05D000666 4.7e-08 63.5 88 36.4
Lj3g0025354 Lotus japonicus HOM05D000881 ORTHO05D000666 4.7e-08 63.5 130 30.8
BcaB01g05921 Brassica carinata HOM05D000881 ORTHO05D000666 6.2e-08 63.2 88 35.2
C03p02280 Brassica napus HOM05D000881 ORTHO05D000666 6.2e-08 63.2 88 35.2
RcHm_v2.0_Chr1g0331581 Rosa chinensis HOM05D000881 ORTHO05D000666 6.2e-08 63.2 194 28.4
TPR.G144 Trifolium pratense HOM05D000881 ORTHO05D000666 6.2e-08 63.2 89 34.8
VMungo0251G0666 Vigna mungo HOM05D000907 ORTHO05D000753 8.1e-08 62.8 164 28.0
AT5G04890 Arabidopsis thaliana HOM05D000881 ORTHO05D000666 1.1e-07 62.4 88 35.2
BolC2t06177H Brassica oleracea HOM05D010059 ORTHO05D000666 1.1e-07 62.4 82 40.2
Medtr3g007660 Medicago truncatula HOM05D000881 ORTHO05D000666 1.1e-07 62.4 89 37.1
Migut.N01922 Erythranthe guttata HOM05D000881 ORTHO05D000666 1.4e-07 62.0 144 29.2
Sp6g37930 Schrenkiella parvula HOM05D000881 ORTHO05D000666 1.4e-07 62.0 88 35.2
Lj3g0025880 Lotus japonicus HOM05D000881 ORTHO05D000666 1.8e-07 61.6 91 35.2
Prupe.2G065600 Prunus persica HOM05D000881 ORTHO05D000666 1.8e-07 61.6 197 26.4
Sed0019713 Sechium edule HOM05D000881 ORTHO05D000666 1.8e-07 61.6 93 33.3
BcaC06g32196 Brassica carinata HOM05D000881 ORTHO05D000666 2.3e-07 61.2 88 33.0
Glyma.08G229900 Glycine max HOM05D022505 ORTHO05D012624 2.3e-07 61.2 141 36.9
Lsat_1_v5_gn_1_87140 Lactuca sativa HOM05D000881 ORTHO05D000666 2.3e-07 61.2 89 38.2
QL04p049792 Quercus lobata HOM05D000881 ORTHO05D000666 2.3e-07 61.2 154 31.8
FvH4_7g05240 Fragaria vesca HOM05D000881 ORTHO05D000666 3.1e-07 60.8 197 26.4
Glyma.06G316200 Glycine max HOM05D000881 ORTHO05D000666 3.1e-07 60.8 203 32.0
HanXRQChr17g0559031 Helianthus annuus HOM05D000881 ORTHO05D000666 4.0e-07 60.5 88 38.6
Glyma.15G216700 Glycine max HOM05D000881 ORTHO05D000666 5.2e-07 60.1 199 27.1
TWI38G1417 Tripterygium wilfordii HOM05D000881 ORTHO05D000666 5.2e-07 60.1 88 36.4
Cc00_g20150 Coffea canephora HOM05D000881 ORTHO05D000666 6.8e-07 59.7 150 29.3
BcaC03g13137 Brassica carinata HOM05D000881 ORTHO05D000666 8.9e-07 59.3 82 39.0
C02p02100 Brassica napus HOM05D000881 ORTHO05D000666 8.9e-07 59.3 82 39.0
Sopen01g040670 Solanum pennellii HOM05D000881 ORTHO05D000666 8.9e-07 59.3 90 33.3
Phvul.011G184400 Phaseolus vulgaris HOM05D022505 ORTHO05D012624 1.2e-06 58.9 141 39.0
BraA02t04826Z Brassica rapa HOM05D000881 ORTHO05D000666 1.5e-06 58.5 82 39.0
Manes.14G075100 Manihot esculenta HOM05D000881 ORTHO05D000666 2.0e-06 58.2 88 35.2
Peaxi162Scf00647g00136 Petunia axillaris HOM05D000881 ORTHO05D000666 2.6e-06 57.8 122 32.0
Potri.008G013800 Populus trichocarpa HOM05D000881 ORTHO05D000666 2.6e-06 57.8 195 26.2
Actinidia21135 Actinidia chinensis HOM05D001769 ORTHO05D001695 3.4e-06 57.4 144 27.8
arahy.Tifrunner.gnm1.ann1.GLLM5N Arachis hypogaea HOM05D000881 ORTHO05D000666 3.4e-06 57.4 196 25.0
CARHR208380 Cardamine hirsuta HOM05D000881 ORTHO05D000080 3.4e-06 57.4 88 34.1
CSS0037632 Camellia sinensis var. sinensis HOM05D000881 ORTHO05D000666 4.4e-06 57.0 93 34.4
Glyma.08G230000 Glycine max HOM05D000881 ORTHO05D000666 4.4e-06 57.0 189 25.9
MD07G1061000 Malus domestica HOM05D000881 ORTHO05D000666 4.4e-06 57.0 180 26.7
Phvul.001G133500 Phaseolus vulgaris HOM05D022505 ORTHO05D012624 4.4e-06 57.0 49 51.0
Psat5g229840 Pisum sativum HOM05D000881 ORTHO05D000666 5.8e-06 56.6 89 32.6
TWI31G1146 Tripterygium wilfordii HOM05D000881 ORTHO05D000666 7.5e-06 56.2 88 35.2
Phvul.005G011300 Phaseolus vulgaris HOM05D000881 ORTHO05D000666 9.9e-06 55.8 198 27.8
QL04p049805 Quercus lobata HOM05D000881 ORTHO05D000666 9.9e-06 55.8 152 30.9
THA.LOC104816480 Tarenaya hassleriana HOM05D000881 ORTHO05D000666 9.9e-06 55.8 98 33.7


User provided reference genes

Program Settings