Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.008G160900 Phaseolus vulgaris HOM05D007582 ORTHO05D009645 3.0e-62 241.5 110 100.0
Phvul.008G167875 Phaseolus vulgaris HOM05D007582 ORTHO05D009645 3.0e-62 241.5 110 100.0
VMungo0647G1492 Vigna mungo HOM05D007582 ORTHO05D009645 3.0e-54 214.9 110 86.4
Glyma.14G150500 Glycine max HOM05D007582 ORTHO05D009645 1.2e-47 193.0 115 78.3
Lalb_Chr17g0343701 Lupinus albus HOM05D007582 ORTHO05D009645 6.2e-39 164.1 110 64.5
Manes.18G077606 Manihot esculenta HOM05D007582 ORTHO05D009645 1.4e-38 162.9 110 63.6
Thecc.08G126100 Theobroma cacao HOM05D007582 ORTHO05D009645 9.8e-37 156.8 109 64.2
Duzib116G0545 Durio zibethinus HOM05D007582 ORTHO05D009645 1.3e-36 156.4 110 61.8
MD15G1347500 Malus domestica HOM05D007582 ORTHO05D009645 4.9e-36 154.5 109 62.4
Atru.chr13.1488 Acer truncatum HOM05D007582 ORTHO05D009645 8.3e-36 153.7 110 64.5
Cpa.g.sc64.90 Carica papaya HOM05D007582 ORTHO05D009645 1.4e-35 152.9 115 62.6
Oeu028565.1 Olea europaea HOM05D007582 ORTHO05D009645 1.4e-35 152.9 113 63.7
Prupe.1G495300 Prunus persica HOM05D007582 ORTHO05D009645 1.9e-35 152.5 112 58.9
RcHm_v2.0_Chr6g0295891 Rosa chinensis HOM05D007582 ORTHO05D009645 3.2e-35 151.8 110 60.9
CANSAT11G2348 Cannabis sativa HOM05D007582 ORTHO05D009645 4.1e-35 151.4 110 60.9
Manes.02G163800 Manihot esculenta HOM05D007582 ORTHO05D009645 4.1e-35 151.4 110 58.2
Solyc06g060300.1 Solanum lycopersicum HOM05D007582 ORTHO05D009645 4.1e-35 151.4 110 60.0
FAN15G1067 Fragaria x ananassa HOM05D007582 ORTHO05D009645 5.4e-35 151.0 110 59.1
TWI34G1919 Tripterygium wilfordii HOM05D007582 ORTHO05D009645 7.0e-35 150.6 112 59.8
CAN.G1040.1 Capsicum annuum HOM05D007582 ORTHO05D009645 9.2e-35 150.2 110 61.8
Sopen06g020420 Solanum pennellii HOM05D007582 ORTHO05D009645 9.2e-35 150.2 110 59.1
PGSC0003DMG400041136 Solanum tuberosum HOM05D007582 ORTHO05D009645 9.2e-35 150.2 110 60.9
TPR.G25776 Trifolium pratense HOM05D007582 ORTHO05D009645 1.2e-34 149.8 112 58.9
Lj1g0018777 Lotus japonicus HOM05D007582 ORTHO05D009645 2.1e-34 149.1 111 58.6
Sc22g0004000 Simmondsia chinensis HOM05D007582 ORTHO05D009645 2.1e-34 149.1 110 57.3
MELO3C010615.2 Cucumis melo HOM05D007582 ORTHO05D009645 2.7e-34 148.7 112 61.6
Carub.0001s3518 Capsella rubella HOM05D007582 ORTHO05D009645 4.6e-34 147.9 110 61.8
Nitab4.5_0003719g0010 Nicotiana tabacum HOM05D007582 ORTHO05D009645 6.0e-34 147.5 113 58.4
CAN.G1040.3 Capsicum annuum HOM05D007582 ORTHO05D009645 7.8e-34 147.1 110 60.9
ClCG08G005690 Citrullus lanatus HOM05D007582 ORTHO05D009645 7.8e-34 147.1 113 60.2
THA.LOC104817375 Tarenaya hassleriana HOM05D007582 ORTHO05D009645 7.8e-34 147.1 110 62.7
Medtr1g029990 Medicago truncatula HOM05D007582 ORTHO05D009645 1.3e-33 146.4 111 58.6
QL09p034466 Quercus lobata HOM05D007582 ORTHO05D009645 1.3e-33 146.4 110 59.1
AT1G44414 Arabidopsis thaliana HOM05D007582 ORTHO05D009645 3.0e-33 145.2 110 61.8
MSTRG.22408 Avicennia marina HOM05D007582 ORTHO05D009645 3.0e-33 145.2 110 61.8
CiPaw.05G221000 Carya illinoinensis HOM05D007582 ORTHO05D009645 3.0e-33 145.2 110 60.9
AL1G52300 Arabidopsis lyrata HOM05D007582 ORTHO05D009645 3.9e-33 144.8 110 60.9
Thhalv10012348m.g Eutrema salsugineum HOM05D007582 ORTHO05D009645 3.9e-33 144.8 110 60.9
Potri.002G083100 Populus trichocarpa HOM05D007582 ORTHO05D009645 1.1e-32 143.3 114 55.3
Haze_00435 Corylus avellana HOM05D007582 ORTHO05D009645 1.5e-32 142.9 111 58.6
Peaxi162Scf00051g00105 Petunia axillaris HOM05D007582 ORTHO05D009645 1.9e-32 142.5 106 59.4
BolC6t35199H Brassica oleracea HOM05D007582 ORTHO05D009645 2.5e-32 142.1 110 63.6
Migut.N03282 Erythranthe guttata HOM05D007582 ORTHO05D009645 2.5e-32 142.1 110 60.9
Gohir.D06G045500 Gossypium hirsutum HOM05D007582 ORTHO05D009645 2.5e-32 142.1 102 63.7
BcaB07g33949 Brassica carinata HOM05D007582 ORTHO05D009645 7.3e-32 140.6 110 60.9
HanXRQChr15g0465231 Helianthus annuus HOM05D007582 ORTHO05D009645 7.3e-32 140.6 110 59.1
Lj4P628T29 Lonicera japonica HOM05D007582 ORTHO05D009645 7.3e-32 140.6 110 59.1
TAR381G0802 Trochodendron aralioides HOM05D007582 ORTHO05D009645 7.3e-32 140.6 110 55.5
Gorai.010G050500 Gossypium raimondii HOM05D007582 ORTHO05D009645 1.2e-31 139.8 102 62.7
Sp1g33530 Schrenkiella parvula HOM05D007582 ORTHO05D009645 1.2e-31 139.8 110 60.9
Aa31LG6G9350 Aethionema arabicum HOM05D007582 ORTHO05D009645 1.6e-31 139.4 110 59.1
CARHR035920 Cardamine hirsuta HOM05D007582 ORTHO05D009645 1.6e-31 139.4 110 59.1
Dinv07214 Davidia involucrata HOM05D007582 ORTHO05D009645 1.6e-31 139.4 117 54.7
SalBow6G5334 Salvia bowleyana HOM05D007582 ORTHO05D009645 1.6e-31 139.4 110 60.0
SGA_v2.0_scaffold28G11996 Striga asiatica HOM05D007582 ORTHO05D009645 1.6e-31 139.4 112 58.9
BcaC08g42847 Brassica carinata HOM05D007582 ORTHO05D009645 2.1e-31 139.0 110 62.7
C06p00630 Brassica napus HOM05D007582 ORTHO05D009645 2.1e-31 139.0 110 62.7
PGR042G2864 Punica granatum HOM05D007582 ORTHO05D009645 2.1e-31 139.0 109 56.0
PSO528G0093 Papaver somniferum HOM05D007582 ORTHO05D009645 3.6e-31 138.3 111 57.7
Nn5g28305 Nelumbo nucifera HOM05D007582 ORTHO05D009645 4.7e-31 137.9 112 53.6
A06p11790 Brassica napus HOM05D007582 ORTHO05D009645 6.2e-31 137.5 110 60.9
Cc10_g11990 Coffea canephora HOM05D007582 ORTHO05D009645 8.1e-31 137.1 115 54.8
RhsimUnG0092400 Rhododendron simsii HOM05D007582 ORTHO05D009645 8.1e-31 137.1 119 52.9
Aqoxy6G00171 Aquilegia oxysepala HOM05D007582 ORTHO05D009645 1.8e-30 136.0 110 53.6
SHI08583 Sapria himalayana HOM05D007582 ORTHO05D009645 3.1e-30 135.2 110 55.5
CSS0038396 Camellia sinensis var. sinensis HOM05D007582 ORTHO05D009645 5.2e-30 134.4 119 51.3
CDE06G0523 Ceratophyllum demersum HOM05D007582 ORTHO05D009645 8.9e-30 133.7 112 51.8
vmacro00836 Vaccinium macrocarpon HOM05D007582 ORTHO05D009645 1.2e-29 133.3 118 51.7
Hma1.2p1_0054F.1_g031010 Hydrangea macrophylla HOM05D007582 ORTHO05D009645 2.0e-29 132.5 111 54.1
PSO170G1805 Papaver somniferum HOM05D007582 ORTHO05D009645 2.6e-29 132.1 111 55.0
Nn1g00264 Nelumbo nucifera HOM05D007582 ORTHO05D009645 1.7e-28 129.4 108 50.9
DCAR_016167 Daucus carota HOM05D007582 ORTHO05D009645 2.9e-28 128.6 110 56.4
Ciclev10002916m.g Citrus clementina HOM05D007582 ORTHO05D009645 4.9e-28 127.9 110 52.7
Psat6g041680 Pisum sativum HOM05D007582 ORTHO05D009139 6.4e-28 127.5 96 56.2
CsaV3_6G034440 Cucumis sativus L. HOM05D007582 ORTHO05D009645 3.2e-27 125.2 103 53.4
Aqoxy6G00227 Aquilegia oxysepala HOM05D007582 ORTHO05D009645 9.2e-27 123.6 103 51.5
ATR0584G060 Amborella trichopoda HOM05D007582 ORTHO05D009645 2.1e-26 122.5 114 48.2
arahy.Tifrunner.gnm1.ann1.WSBZ3R Arachis hypogaea HOM05D007582 ORTHO05D009645 1.0e-25 120.2 100 58.0
HPP92_006841 Vanilla planifolia HOM05D007582 ORTHO05D009645 2.3e-25 119.0 121 47.1
ECA233G1368 Erigeron canadensis HOM05D007582 ORTHO05D009645 3.9e-25 118.2 104 51.9
Zm00001eb348620 Zea mays HOM05D007582 ORTHO05D009645 3.9e-25 118.2 110 48.2
Gohir.A06G045000 Gossypium hirsutum HOM05D007582 ORTHO05D009645 5.6e-24 114.4 83 60.2
Sed0002225 Sechium edule HOM05D007582 ORTHO05D009645 1.6e-23 112.8 120 45.0
Os05g0435400 Oryza sativa ssp. japonica HOM05D007582 ORTHO05D009645 2.6e-21 105.5 113 46.9
Nn3g18690 Nelumbo nucifera HOM05D007582 ORTHO05D009645 1.7e-20 102.8 106 47.2
SMO143G0209 Selaginella moellendorffii HOM05D007582 ORTHO05D009645 2.2e-20 102.4 109 45.0
Phvul.L001669 Phaseolus vulgaris HOM05D007582 ORTHO05D009645 1.5e-16 89.7 42 100.0
Pp3c19_19360 Physcomitrium patens HOM05D007582 ORTHO05D009645 2.8e-15 85.5 122 37.7
Mapoly0085s0071 Marchantia polymorpha HOM05D007582 ORTHO05D009645 4.7e-15 84.7 119 36.1
Nitab4.5_0011334g0030 Nicotiana tabacum HOM05D007582 ORTHO05D009645 1.1e-14 83.6 79 51.9
Nn4g24512 Nelumbo nucifera HOM05D007582 ORTHO05D009645 3.4e-13 78.6 71 47.9
Aa31LG6G9370 Aethionema arabicum HOM05D007582 ORTHO05D009645 9.3e-11 70.5 110 40.9
AagrBONN_evm.TU.Sc2ySwM_362.1959 Anthoceros agrestis HOM05D007582 ORTHO05D009645 4.0e-06 55.1 62 43.5
AagrBONN_evm.TU.Sc2ySwM_362.2461 Anthoceros agrestis HOM05D007582 ORTHO05D009645 6.9e-06 54.3 61 39.3


User provided reference genes

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