Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.008G160300 Phaseolus vulgaris HOM05D006879 ORTHO05D008452 1.3e-60 236.1 115 100.0
VMungo0647G0471 Vigna mungo HOM05D006879 ORTHO05D008452 1.2e-53 213.0 115 90.4
Glyma.14G151700 Glycine max HOM05D006879 ORTHO05D008452 7.6e-48 193.7 118 81.4
arahy.Tifrunner.gnm1.ann1.0SZ2NS Arachis hypogaea HOM05D006879 ORTHO05D008452 3.6e-42 174.9 111 73.9
arahy.Tifrunner.gnm1.ann1.61DA9N Arachis hypogaea HOM05D006879 ORTHO05D008452 3.6e-42 174.9 111 73.9
arahy.Tifrunner.gnm1.ann1.GV74HV Arachis hypogaea HOM05D006879 ORTHO05D008452 3.6e-42 174.9 111 73.9
CiPaw.06G031600 Carya illinoinensis HOM05D006879 ORTHO05D008452 5.3e-41 171.0 113 70.8
Lj1g0005641 Lotus japonicus HOM05D006879 ORTHO05D008452 5.8e-40 167.5 97 79.4
Medtr3g088570 Medicago truncatula HOM05D006879 ORTHO05D008452 5.8e-40 167.5 103 76.7
Haze_00431 Corylus avellana HOM05D000586 ORTHO05D008452 1.3e-39 166.4 96 80.2
QL09p034330 Quercus lobata HOM05D006879 ORTHO05D008452 1.3e-39 166.4 113 69.0
QL09p034374 Quercus lobata HOM05D006879 ORTHO05D008452 1.3e-39 166.4 113 69.0
RcHm_v2.0_Chr6g0295961 Rosa chinensis HOM05D006879 ORTHO05D008452 2.9e-39 165.2 115 69.6
Cfa016025 Carpinus fangiana HOM05D006879 ORTHO05D008452 3.8e-39 164.9 116 69.8
Dinv27305 Davidia involucrata HOM05D006879 ORTHO05D008452 3.8e-39 164.9 105 73.3
Ciclev10002899m.g Citrus clementina HOM05D006879 ORTHO05D008452 4.9e-39 164.5 97 75.3
Lalb_Chr11g0066061 Lupinus albus HOM05D006879 ORTHO05D008452 4.9e-39 164.5 113 70.8
FvH4_2g27080 Fragaria vesca HOM05D006879 ORTHO05D008452 1.1e-38 163.3 105 72.4
Manes.02G164300 Manihot esculenta HOM05D006879 ORTHO05D008452 1.1e-38 163.3 113 69.9
Gohir.D01G180300 Gossypium hirsutum HOM05D006879 ORTHO05D008452 1.4e-38 162.9 109 68.8
Sc02g0005010 Simmondsia chinensis HOM05D006879 ORTHO05D008452 1.4e-38 162.9 110 69.1
MD15G1347100 Malus domestica HOM05D006879 ORTHO05D008452 1.9e-38 162.5 106 76.4
Nn5g28321 Nelumbo nucifera HOM05D006879 ORTHO05D008452 1.9e-38 162.5 97 74.2
Prupe.1G494800 Prunus persica HOM05D006879 ORTHO05D008452 1.9e-38 162.5 99 78.8
FAN20G0093 Fragaria x ananassa HOM05D006879 ORTHO05D008452 4.2e-38 161.4 115 67.8
FAN24G0949 Fragaria x ananassa HOM05D006879 ORTHO05D008452 4.2e-38 161.4 105 71.4
Dinv07211 Davidia involucrata HOM05D006879 ORTHO05D008452 5.5e-38 161.0 115 67.8
Gohir.A01G189200 Gossypium hirsutum HOM05D006879 ORTHO05D008452 5.5e-38 161.0 105 69.5
Thecc.08G126700 Theobroma cacao HOM05D006879 ORTHO05D008452 5.5e-38 161.0 105 69.5
Atru.chr13.1490 Acer truncatum HOM05D006879 ORTHO05D008452 7.1e-38 160.6 99 77.8
Hma1.2p1_0054F.1_g031040 Hydrangea macrophylla HOM05D006879 ORTHO05D008452 9.3e-38 160.2 115 67.0
Aqoxy6G00233 Aquilegia oxysepala HOM05D006879 ORTHO05D008452 1.2e-37 159.8 97 75.3
MELO3C010476.2 Cucumis melo HOM05D006879 ORTHO05D008452 1.2e-37 159.8 104 68.3
Gorai.002G222300 Gossypium raimondii HOM05D006879 ORTHO05D008452 1.2e-37 159.8 115 67.0
Hund17297 Selenicereus undatus HOM05D006879 ORTHO05D008452 1.2e-37 159.8 97 77.3
Ca_28182_v3 Cicer arietinum L. HOM05D006879 ORTHO05D008452 1.6e-37 159.5 97 77.3
COL.COLO4_03398 Corchorus olitorius HOM05D006879 ORTHO05D008452 1.6e-37 159.5 114 68.4
Duzib041G0788 Durio zibethinus HOM05D006879 ORTHO05D008452 1.6e-37 159.5 115 65.2
Eucgr.F03793 Eucalyptus grandis HOM05D006879 ORTHO05D008452 2.1e-37 159.1 115 67.0
Actinidia03466 Actinidia chinensis HOM05D006879 ORTHO05D008452 4.6e-37 157.9 114 66.7
CSS0011792 Camellia sinensis var. sinensis HOM05D006879 ORTHO05D008452 4.6e-37 157.9 105 70.5
CsaV3_4G028290 Cucumis sativus L. HOM05D006879 ORTHO05D008452 1.0e-36 156.8 111 63.1
Nitab4.5_0005583g0080 Nicotiana tabacum HOM05D006879 ORTHO05D008452 1.0e-36 156.8 106 72.6
Solyc08g067800.3 Solanum lycopersicum HOM05D006879 ORTHO05D008452 1.0e-36 156.8 97 73.2
Sopen08g021740 Solanum pennellii HOM05D006879 ORTHO05D008452 1.0e-36 156.8 97 73.2
PGR083G2398 Punica granatum HOM05D006879 ORTHO05D008452 1.8e-36 156.0 115 63.5
TAR628G0734 Trochodendron aralioides HOM05D006879 ORTHO05D008452 3.0e-36 155.2 97 73.2
Psat5g086200 Pisum sativum HOM05D006879 ORTHO05D008452 3.9e-36 154.8 103 72.8
Sed0023358 Sechium edule HOM05D006879 ORTHO05D008452 3.9e-36 154.8 112 63.4
AL2G37750 Arabidopsis lyrata HOM05D006879 ORTHO05D008452 5.1e-36 154.5 97 74.2
Lsat_1_v5_gn_6_93360 Lactuca sativa HOM05D006879 ORTHO05D008452 6.7e-36 154.1 106 71.7
ClCG11G015720 Citrullus lanatus HOM05D006879 ORTHO05D008452 1.1e-35 153.3 117 62.4
AT1G77540 Arabidopsis thaliana HOM05D006879 ORTHO05D008452 1.5e-35 152.9 97 72.2
TWI32G0821 Tripterygium wilfordii HOM05D006879 ORTHO05D008452 1.9e-35 152.5 97 74.2
Cc10_g12010 Coffea canephora HOM05D006879 ORTHO05D008452 2.5e-35 152.1 114 65.8
CDE07G0981 Ceratophyllum demersum HOM05D006879 ORTHO05D008452 3.3e-35 151.8 104 67.3
Nitab4.5_0004334g0040 Nicotiana tabacum HOM05D006879 ORTHO05D008452 3.3e-35 151.8 112 67.9
Carub.0002s2444 Capsella rubella HOM05D006879 ORTHO05D008452 4.3e-35 151.4 97 73.2
CAN.G21.5 Capsicum annuum HOM05D006879 ORTHO05D008452 4.3e-35 151.4 104 68.3
AUR62014329 Chenopodium quinoa HOM05D006879 ORTHO05D008452 5.6e-35 151.0 119 65.5
Thhalv10019334m.g Eutrema salsugineum HOM05D006879 ORTHO05D008452 5.6e-35 151.0 90 76.7
ECA240G3722 Erigeron canadensis HOM05D006879 ORTHO05D008452 9.6e-35 150.2 115 67.8
Potri.005G178501 Populus trichocarpa HOM05D006879 ORTHO05D008452 9.6e-35 150.2 87 77.0
Aa31LG4G7630 Aethionema arabicum HOM05D006879 ORTHO05D008452 1.3e-34 149.8 115 60.9
HanXRQChr03g0088981 Helianthus annuus HOM05D006879 ORTHO05D008452 1.3e-34 149.8 115 66.1
BcaB02g07111 Brassica carinata HOM05D006879 ORTHO05D008452 2.1e-34 149.1 97 72.2
Carub.0001s2123 Capsella rubella HOM05D006879 ORTHO05D008452 2.8e-34 148.7 102 66.7
AL1G34970 Arabidopsis lyrata HOM05D006879 ORTHO05D008452 3.7e-34 148.3 96 68.8
BraA07t30441Z Brassica rapa HOM05D006879 ORTHO05D008452 3.7e-34 148.3 97 71.1
ATR0584G146 Amborella trichopoda HOM05D006879 ORTHO05D008452 4.8e-34 147.9 95 71.6
C06p31190 Brassica napus HOM05D006879 ORTHO05D008452 6.2e-34 147.5 97 72.2
CARHR071070 Cardamine hirsuta HOM05D006879 ORTHO05D008452 6.2e-34 147.5 97 72.2
BcaC08g45472 Brassica carinata HOM05D006879 ORTHO05D008452 8.1e-34 147.1 97 71.1
BolC6t38260H Brassica oleracea HOM05D006879 ORTHO05D008452 8.1e-34 147.1 97 71.1
A07p27940 Brassica napus HOM05D006879 ORTHO05D008452 1.1e-33 146.7 97 70.1
THA.LOC104813659 Tarenaya hassleriana HOM05D006879 ORTHO05D008452 1.4e-33 146.4 111 63.1
BcaC05g26099 Brassica carinata HOM05D006879 ORTHO05D008452 1.8e-33 146.0 93 69.9
CANSAT56G2034 Cannabis sativa HOM05D006879 ORTHO05D008452 1.8e-33 146.0 108 68.5
Sp5g32720 Schrenkiella parvula HOM05D006879 ORTHO05D008452 1.8e-33 146.0 115 60.0
Aa31LG7G5750 Aethionema arabicum HOM05D006879 ORTHO05D008452 2.4e-33 145.6 90 72.2
AT1G21770 Arabidopsis thaliana HOM05D006879 ORTHO05D008452 2.4e-33 145.6 104 63.5
AUR62019072 Chenopodium quinoa HOM05D006879 ORTHO05D008452 3.1e-33 145.2 101 66.3
BcaB07g32176 Brassica carinata HOM05D006879 ORTHO05D008452 4.0e-33 144.8 93 69.9
EL10Ac1g01022 Beta vulgaris HOM05D006879 ORTHO05D008452 6.9e-33 144.1 108 64.8
BolC5t30777H Brassica oleracea HOM05D006879 ORTHO05D008452 9.0e-33 143.7 93 68.8
Thhalv10009164m.g Eutrema salsugineum HOM05D006879 ORTHO05D008452 1.2e-32 143.3 93 68.8
Migut.C01128 Erythranthe guttata HOM05D006879 ORTHO05D008452 2.0e-32 142.5 101 63.4
MSTRG.25382 Avicennia marina HOM05D006879 ORTHO05D008452 2.6e-32 142.1 95 67.4
SGA_v2.0_scaffold52G18964 Striga asiatica HOM05D006879 ORTHO05D008452 2.6e-32 142.1 107 64.5
Sp1g19330 Schrenkiella parvula HOM05D006879 ORTHO05D008452 4.5e-32 141.4 93 67.7
FAN15G3590 Fragaria x ananassa HOM05D006879 ORTHO05D008452 5.8e-32 141.0 150 51.3
PSO528G0112 Papaver somniferum HOM05D006879 ORTHO05D008452 1.3e-31 139.8 115 57.4
A06p17880 Brassica napus HOM05D006879 ORTHO05D008452 1.7e-31 139.4 93 67.7
BraA06t24878Z Brassica rapa HOM05D006879 ORTHO05D008452 1.7e-31 139.4 93 67.7
C05p20780 Brassica napus HOM05D006879 ORTHO05D008452 6.5e-31 137.5 93 67.7
PSO170G0506 Papaver somniferum HOM05D006879 ORTHO05D008452 5.5e-30 134.4 115 57.4
TPR.G20905 Trifolium pratense HOM05D006879 ORTHO05D008452 1.8e-28 129.4 80 78.8
CAN.G21.4 Capsicum annuum HOM05D006879 ORTHO05D008452 2.5e-27 125.6 103 52.4
Cpa.g.sc418.6 Carica papaya HOM05D006879 ORTHO05D008452 1.4e-25 119.8 73 72.6
GSVIVG01008857001 Vitis vinifera HOM05D006879 ORTHO05D008452 1.4e-25 119.8 68 79.4
RhsimUnG0092300 Rhododendron simsii HOM05D000586 ORTHO05D008452 1.8e-25 119.4 81 69.1
vmacro00838 Vaccinium macrocarpon HOM05D006879 ORTHO05D008452 1.8e-25 119.4 79 70.9
Oeu059437.1 Olea europaea HOM05D006879 ORTHO05D008452 4.1e-25 118.2 68 76.5
SMO146G0286 Selaginella moellendorffii HOM05D006879 ORTHO05D008452 1.4e-22 109.8 92 55.4
Ah.05g171050 Amaranthus hybridus HOM05D006879 ORTHO05D008452 2.5e-22 109.0 81 65.4
Pp3c12_9490 Physcomitrium patens HOM05D006879 ORTHO05D008452 9.3e-22 107.1 105 52.4
Zm00001eb082730 Zea mays HOM05D006879 ORTHO05D008452 9.3e-22 107.1 96 56.2
Peaxi162Scf00332g00015 Petunia axillaris HOM05D006879 ORTHO05D008452 1.8e-20 102.8 72 69.4
SEGI_19819 Sequoiadendron giganteum HOM05D006879 ORTHO05D008452 6.7e-20 100.9 83 59.0
HanXRQChr01g0005251 Helianthus annuus HOM05D006879 ORTHO05D008452 1.3e-18 96.7 60 75.0
HanXRQChr04g0101301 Helianthus annuus HOM05D006879 ORTHO05D008452 1.4e-17 93.2 67 67.2
Mapoly0075s0062 Marchantia polymorpha HOM05D006879 ORTHO05D008452 1.2e-16 90.1 117 40.2
AagrBONN_evm.TU.Sc2ySwM_117.2168 Anthoceros agrestis HOM05D006879 ORTHO05D008452 1.0e-15 87.0 91 47.3
Os04g0431300 Oryza sativa ssp. japonica HOM05D006879 ORTHO05D008452 1.0e-15 87.0 62 59.7
Eucgr.H03925 Eucalyptus grandis HOM05D006879 ORTHO05D008452 1.6e-13 79.7 56 64.3
Eucgr.H03927 Eucalyptus grandis HOM05D006879 ORTHO05D008452 2.1e-13 79.3 99 45.5
CBR_g36233 Chara braunii HOM05D006879 ORTHO05D008452 3.6e-13 78.6 151 34.4
HanXRQChr09g0244451 Helianthus annuus HOM05D006879 ORTHO05D008452 2.3e-12 75.9 61 60.7


User provided reference genes

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