Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.008G154900 Phaseolus vulgaris HOM05D000849 ORTHO05D003989 8.0e-45 183.3 90 100.0
Glyma.01G005300 Glycine max HOM05D000849 ORTHO05D003989 5.2e-20 100.9 51 92.2
Glyma.07G126300 Glycine max HOM05D000849 ORTHO05D003989 5.2e-20 100.9 51 92.2
Phvul.004G173800 Phaseolus vulgaris HOM05D000849 ORTHO05D003989 5.2e-20 100.9 51 92.2
AL3G48440 Arabidopsis lyrata HOM05D000849 ORTHO05D003989 2.0e-19 99.0 51 88.2
AT2G19790 Arabidopsis thaliana HOM05D000849 ORTHO05D003989 2.0e-19 99.0 51 88.2
arahy.Tifrunner.gnm1.ann1.URAI8Z Arachis hypogaea HOM05D000849 ORTHO05D003989 2.0e-19 99.0 51 90.2
arahy.Tifrunner.gnm1.ann1.XR2T8G Arachis hypogaea HOM05D000849 ORTHO05D003989 2.0e-19 99.0 51 90.2
BolC7t40613H Brassica oleracea HOM05D000849 ORTHO05D003989 2.0e-19 99.0 51 88.2
Carub.0003s3407 Capsella rubella HOM05D000849 ORTHO05D003989 2.0e-19 99.0 51 88.2
CAN.G1058.10 Capsicum annuum HOM05D000849 ORTHO05D003989 2.0e-19 99.0 51 90.2
CARHR110250 Cardamine hirsuta HOM05D000849 ORTHO05D003989 2.0e-19 99.0 51 88.2
CiPaw.04G154300 Carya illinoinensis HOM05D000849 ORTHO05D003989 2.0e-19 99.0 51 90.2
ClCG03G015970 Citrullus lanatus HOM05D000849 ORTHO05D003989 2.0e-19 99.0 51 90.2
MELO3C015429.2 Cucumis melo HOM05D000849 ORTHO05D003989 2.0e-19 99.0 51 90.2
CsaV3_1G039990 Cucumis sativus L. HOM05D000849 ORTHO05D003989 2.0e-19 99.0 51 90.2
Duzib187G0631 Durio zibethinus HOM05D000849 ORTHO05D003989 2.0e-19 99.0 51 90.2
Gohir.A05G027200 Gossypium hirsutum HOM05D000849 ORTHO05D003989 2.0e-19 99.0 51 90.2
Gohir.A13G194600 Gossypium hirsutum HOM05D000849 ORTHO05D003989 2.0e-19 99.0 51 90.2
Gohir.D05G029100 Gossypium hirsutum HOM05D000849 ORTHO05D003989 2.0e-19 99.0 51 90.2
Gohir.D13G200300 Gossypium hirsutum HOM05D000849 ORTHO05D003989 2.0e-19 99.0 51 90.2
Gorai.009G029200 Gossypium raimondii HOM05D000849 ORTHO05D003989 2.0e-19 99.0 51 90.2
Gorai.013G229100 Gossypium raimondii HOM05D000849 ORTHO05D003989 2.0e-19 99.0 51 90.2
Lalb_Chr14g0375221 Lupinus albus HOM05D000849 ORTHO05D003989 2.0e-19 99.0 51 90.2
QL02p086970 Quercus lobata HOM05D000849 ORTHO05D003989 2.0e-19 99.0 51 90.2
Sp3g33140 Schrenkiella parvula HOM05D000849 ORTHO05D003989 2.0e-19 99.0 51 88.2
TWI63G0367 Tripterygium wilfordii HOM05D000849 ORTHO05D003989 2.0e-19 99.0 51 90.2
VMungo0464G2126 Vigna mungo HOM05D000849 ORTHO05D003989 2.0e-19 99.0 51 90.2
Actinidia29881 Actinidia chinensis HOM05D000849 ORTHO05D003989 3.4e-19 98.2 51 88.2
Dinv42272 Davidia involucrata HOM05D000849 ORTHO05D003989 3.4e-19 98.2 51 88.2
Peaxi162Scf00298g00114 Petunia axillaris HOM05D000849 ORTHO05D003989 3.4e-19 98.2 51 88.2
THA.LOC104820037 Tarenaya hassleriana HOM05D000849 ORTHO05D003989 3.4e-19 98.2 51 88.2
BcaC04g22820 Brassica carinata HOM05D000849 ORTHO05D003989 4.4e-19 97.8 51 86.3
A09p12580 Brassica napus HOM05D000849 ORTHO05D003989 4.4e-19 97.8 51 86.3
C09p14940 Brassica napus HOM05D000849 ORTHO05D003989 4.4e-19 97.8 51 86.3
BolC9t54396H Brassica oleracea HOM05D000849 ORTHO05D003989 4.4e-19 97.8 51 86.3
BraA09t36905Z Brassica rapa HOM05D000849 ORTHO05D003989 4.4e-19 97.8 51 86.3
Manes.16G106500 Manihot esculenta HOM05D000849 ORTHO05D003989 4.4e-19 97.8 51 88.2
Sabra06G0117900 Salix brachista HOM05D000849 ORTHO05D003989 4.4e-19 97.8 51 88.2
Sed0020746 Sechium edule HOM05D000849 ORTHO05D003989 4.4e-19 97.8 51 88.2
Aa31LG8G16770 Aethionema arabicum HOM05D000849 ORTHO05D003989 5.8e-19 97.4 51 86.3
ECA236G3815 Erigeron canadensis HOM05D000849 ORTHO05D003989 5.8e-19 97.4 51 88.2
Lsat_1_v5_gn_8_88280 Lactuca sativa HOM05D000849 ORTHO05D003989 5.8e-19 97.4 51 88.2
Nitab4.5_0004180g0010 Nicotiana tabacum HOM05D000849 ORTHO05D003989 5.8e-19 97.4 51 88.2
Potri.006G149100 Populus trichocarpa HOM05D000849 ORTHO05D003989 5.8e-19 97.4 51 86.3
THA.LOC104814582 Tarenaya hassleriana HOM05D000849 ORTHO05D003989 5.8e-19 97.4 51 86.3
vmacro06264 Vaccinium macrocarpon HOM05D000849 ORTHO05D003989 5.8e-19 97.4 51 88.2
Ah.09g230330 Amaranthus hybridus HOM05D000849 ORTHO05D003989 7.6e-19 97.1 51 86.3
EL10Ac8g18347 Beta vulgaris HOM05D000849 ORTHO05D003989 7.6e-19 97.1 51 86.3
unitig_26.g9704 Utricularia gibba HOM05D000849 ORTHO05D003989 7.6e-19 97.1 51 86.3
Atru.chr7.1508 Acer truncatum HOM05D000849 ORTHO05D003989 9.9e-19 96.7 51 88.2
Cpa.g.sc78.44 Carica papaya HOM05D000849 ORTHO05D003989 9.9e-19 96.7 51 88.2
CiPaw.03G221100 Carya illinoinensis HOM05D000849 ORTHO05D003989 9.9e-19 96.7 51 88.2
Ciclev10009831m.g Citrus clementina HOM05D000849 ORTHO05D003989 9.9e-19 96.7 51 88.2
Duzib150G0327 Durio zibethinus HOM05D000849 ORTHO05D003989 9.9e-19 96.7 51 88.2
Eucgr.C00951 Eucalyptus grandis HOM05D000849 ORTHO05D003989 9.9e-19 96.7 51 88.2
FAN28G0398 Fragaria x ananassa HOM05D000849 ORTHO05D003989 9.9e-19 96.7 51 88.2
MD02G1069000 Malus domestica HOM05D000849 ORTHO05D003989 9.9e-19 96.7 51 88.2
PGR142G0605 Punica granatum HOM05D000849 ORTHO05D003989 9.9e-19 96.7 51 88.2
RcHm_v2.0_Chr2g0092321 Rosa chinensis HOM05D000849 ORTHO05D003989 9.9e-19 96.7 51 88.2
SalBow6G5864 Salvia bowleyana HOM05D000849 ORTHO05D003989 9.9e-19 96.7 52 82.7
SGA_v2.0_scaffold279G46782 Striga asiatica HOM05D000849 ORTHO05D003989 9.9e-19 96.7 51 84.3
SGA_v2.0_scaffold302G47808 Striga asiatica HOM05D000849 ORTHO05D003989 9.9e-19 96.7 51 84.3
Thecc.09G096900 Theobroma cacao HOM05D000849 ORTHO05D003989 9.9e-19 96.7 51 88.2
HPP92_009846 Vanilla planifolia HOM05D000849 ORTHO05D003989 9.9e-19 96.7 51 88.2
Haze_25852 Corylus avellana HOM05D000849 ORTHO05D003989 1.3e-18 96.3 51 86.3
FvH4_1g06580 Fragaria vesca HOM05D000849 ORTHO05D003989 1.3e-18 96.3 51 86.3
FAN19G1758 Fragaria x ananassa HOM05D000849 ORTHO05D003989 1.3e-18 96.3 51 86.3
FAN26G0314 Fragaria x ananassa HOM05D000849 ORTHO05D003989 1.3e-18 96.3 51 86.3
FAN26G0318 Fragaria x ananassa HOM05D000849 ORTHO05D003989 1.3e-18 96.3 51 86.3
Aqoxy7G01359 Aquilegia oxysepala HOM05D000849 ORTHO05D003989 1.7e-18 95.9 51 84.3
Hund26299 Selenicereus undatus HOM05D000849 ORTHO05D003989 2.2e-18 95.5 51 86.3
Sc08g0008140 Simmondsia chinensis HOM05D000849 ORTHO05D003989 2.2e-18 95.5 51 86.3
Lj4g0006741 Lotus japonicus HOM05D000849 ORTHO05D003989 2.9e-18 95.1 51 86.3
Manes.03G029400 Manihot esculenta HOM05D000849 ORTHO05D003989 2.9e-18 95.1 51 84.3
Nn8g39010 Nelumbo nucifera HOM05D000849 ORTHO05D003989 2.9e-18 95.1 51 84.3
Oeu036246.1 Olea europaea HOM05D000849 ORTHO05D003989 2.9e-18 95.1 51 86.3
Solyc05g026130.3 Solanum lycopersicum HOM05D000849 ORTHO05D003989 2.9e-18 95.1 51 86.3
Sopen05g022340 Solanum pennellii HOM05D000849 ORTHO05D003989 2.9e-18 95.1 51 86.3
PGSC0003DMG400028942 Solanum tuberosum HOM05D000849 ORTHO05D003989 2.9e-18 95.1 51 86.3
Aqoxy7G03958 Aquilegia oxysepala HOM05D000849 ORTHO05D003989 3.8e-18 94.7 51 82.4
MSTRG.6030 Avicennia marina HOM05D000849 ORTHO05D003989 3.8e-18 94.7 51 84.3
AUR62033272 Chenopodium quinoa HOM05D000849 ORTHO05D003989 3.8e-18 94.7 51 82.4
HPP92_024117 Vanilla planifolia HOM05D000849 ORTHO05D003989 3.8e-18 94.7 51 84.3
BcaB03g16769 Brassica carinata HOM05D000849 ORTHO05D003989 4.9e-18 94.4 52 86.5
BcaC06g36622 Brassica carinata HOM05D000849 ORTHO05D003989 4.9e-18 94.4 52 86.5
A07p00920 Brassica napus HOM05D000849 ORTHO05D003989 4.9e-18 94.4 52 86.5
C07p02080 Brassica napus HOM05D000849 ORTHO05D003989 4.9e-18 94.4 52 86.5
BraA07t27892Z Brassica rapa HOM05D000849 ORTHO05D003989 4.9e-18 94.4 52 86.5
Cc06_g10770 Coffea canephora HOM05D000849 ORTHO05D003989 4.9e-18 94.4 51 84.3
Prupe.7G216600 Prunus persica HOM05D000849 ORTHO05D003989 4.9e-18 94.4 51 86.3
ATR0705G079 Amborella trichopoda HOM05D000849 ORTHO05D003989 6.4e-18 94.0 51 84.3
Hma1.2p1_0663F.1_g198540 Hydrangea macrophylla HOM05D000849 ORTHO05D003989 6.4e-18 94.0 52 78.8
Mapoly0016s0005 Marchantia polymorpha HOM05D000849 ORTHO05D003989 6.4e-18 94.0 51 82.4
PSO210G0713 Papaver somniferum HOM05D000849 ORTHO05D003989 6.4e-18 94.0 51 80.4
PSO210G7720 Papaver somniferum HOM05D000849 ORTHO05D003989 6.4e-18 94.0 51 80.4
GSVIVG01015270001 Vitis vinifera HOM05D000849 ORTHO05D003989 6.4e-18 94.0 51 86.3
MSTRG.19541 Avicennia marina HOM05D000849 ORTHO05D003989 8.4e-18 93.6 51 82.4
Ca_17379_v3 Cicer arietinum L. HOM05D000849 ORTHO05D003989 8.4e-18 93.6 51 84.3
HanXRQChr09g0238561 Helianthus annuus HOM05D000849 ORTHO05D003989 8.4e-18 93.6 51 84.3
MD15G1200600 Malus domestica HOM05D000849 ORTHO05D003989 8.4e-18 93.6 51 86.3
Medtr7g100010 Medicago truncatula HOM05D000849 ORTHO05D003989 8.4e-18 93.6 51 84.3
Medtr8g102180 Medicago truncatula HOM05D000849 ORTHO05D003989 8.4e-18 93.6 51 84.3
Psat7g018560 Pisum sativum HOM05D000849 ORTHO05D003989 8.4e-18 93.6 51 84.3
SEGI_24636 Sequoiadendron giganteum HOM05D000849 ORTHO05D003989 8.4e-18 93.6 51 80.4
TPR.G34776 Trifolium pratense HOM05D000849 ORTHO05D003989 8.4e-18 93.6 51 84.3
Zm00001eb178620 Zea mays HOM05D000849 ORTHO05D003989 8.4e-18 93.6 51 82.4
CSS0012070 Camellia sinensis var. sinensis HOM05D000849 ORTHO05D003989 1.1e-17 93.2 51 82.4
Lj2g0010400 Lotus japonicus HOM05D000849 ORTHO05D003989 1.1e-17 93.2 51 84.3
Os08g0395300 Oryza sativa ssp. japonica HOM05D000849 ORTHO05D003989 1.1e-17 93.2 51 80.4
TAR636G1139 Trochodendron aralioides HOM05D000849 ORTHO05D003989 1.1e-17 93.2 51 80.4
CBR_g2797 Chara braunii HOM05D000849 ORTHO05D003989 1.9e-17 92.4 51 82.4
PSO832G0835 Papaver somniferum HOM05D000849 ORTHO05D003989 2.4e-17 92.0 51 78.4
Phvul.002G306700 Phaseolus vulgaris HOM05D000849 ORTHO05D003989 2.4e-17 92.0 51 82.4
PGR102G1239 Punica granatum HOM05D000849 ORTHO05D003989 2.4e-17 92.0 51 84.3
VMungo0251G1053 Vigna mungo HOM05D000849 ORTHO05D003989 2.4e-17 92.0 51 82.4
MBI04_g06989_MAGBIO Magnolia biondii HOM05D000849 ORTHO05D003989 3.2e-17 91.7 51 78.4
CDE05G3423 Ceratophyllum demersum HOM05D000849 ORTHO05D003989 5.4e-17 90.9 51 80.4
Migut.K00562 Erythranthe guttata HOM05D000849 ORTHO05D003989 5.4e-17 90.9 51 78.4
Os10g0368400 Oryza sativa ssp. japonica HOM05D000849 ORTHO05D003989 5.4e-17 90.9 51 78.4
AagrBONN_evm.TU.Sc2ySwM_362.940 Anthoceros agrestis HOM05D000849 ORTHO05D003989 7.1e-17 90.5 52 76.9
CDE05G2264 Ceratophyllum demersum HOM05D000849 ORTHO05D003989 7.1e-17 90.5 51 78.4
SMO196G0114 Selaginella moellendorffii HOM05D000849 ORTHO05D003989 9.2e-17 90.1 51 76.5
FvH4_5g22770 Fragaria vesca HOM05D000849 ORTHO05D003989 1.2e-16 89.7 51 82.4
FAN18G0868 Fragaria x ananassa HOM05D000849 ORTHO05D003989 1.2e-16 89.7 51 82.4
Actinidia17501 Actinidia chinensis HOM05D000849 ORTHO05D003989 1.6e-16 89.4 51 76.5
PSO063G4962 Papaver somniferum HOM05D000849 ORTHO05D003989 1.6e-16 89.4 51 76.5
Pp3c14_14670 Physcomitrium patens HOM05D000849 ORTHO05D003989 2.1e-16 89.0 51 76.5
FAN08G2450 Fragaria x ananassa HOM05D000849 ORTHO05D003989 3.5e-16 88.2 51 80.4
PSO782G5042 Papaver somniferum HOM05D000849 ORTHO05D003989 3.5e-16 88.2 51 74.5
Cre07.g330950 Chlamydomonas reinhardtii HOM05D000849 ORTHO05D003989 7.8e-16 87.0 50 76.0
Glyma.08G031600 Glycine max HOM05D000849 ORTHO05D003989 1.3e-15 86.3 52 75.0
MCO15G266 Micromonas commoda HOM05D000849 ORTHO05D003989 6.9e-12 73.9 49 61.2
SHI35365 Sapria himalayana HOM05D000849 ORTHO05D003989 2.2e-10 68.9 55 56.4
Rhsim03G0235600 Rhododendron simsii HOM05D000849 ORTHO05D003989 1.6e-08 62.8 31 83.9
DCAR_028635 Daucus carota HOM05D000849 ORTHO05D003989 4.6e-08 61.2 31 80.6
TAR624G0880 Trochodendron aralioides HOM05D000849 ORTHO05D414879 6.0e-08 60.8 50 64.0
SHI03952 Sapria himalayana HOM05D000849 ORTHO05D003989 1.7e-07 59.3 73 41.1
MCO15G056 Micromonas commoda HOM05D000849 ORTHO05D001720 1.9e-06 55.8 50 48.0
Migut.J01079 Erythranthe guttata HOM05D000849 ORTHO05D003989 2.5e-06 55.5 28 78.6
Thhalv10002117m.g Eutrema salsugineum HOM05D000849 ORTHO05D003989 3.3e-06 55.1 25 92.0
SHI20141 Sapria himalayana HOM05D000849 ORTHO05D003989 5.6e-06 54.3 34 61.8


User provided reference genes

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