Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.008G153900 Phaseolus vulgaris HOM05D007622 ORTHO05D009409 1.4e-62 242.7 116 100.0
Glyma.16G070800 Glycine max HOM05D007622 ORTHO05D009409 1.8e-57 225.7 117 94.9
Glyma.19G060600 Glycine max HOM05D007622 ORTHO05D009409 1.4e-54 216.1 117 91.5
arahy.Tifrunner.gnm1.ann1.QKG8XN Arachis hypogaea HOM05D007622 ORTHO05D009409 2.7e-53 211.8 117 87.2
Medtr7g033680 Medicago truncatula HOM05D007622 ORTHO05D009409 4.5e-48 194.5 117 84.6
arahy.Tifrunner.gnm1.ann1.30MLP8 Arachis hypogaea HOM05D007622 ORTHO05D009409 1.3e-47 193.0 128 78.1
Lalb_Chr24g0402871 Lupinus albus HOM05D007622 ORTHO05D009409 3.2e-46 188.3 119 80.7
Potri.017G071300 Populus trichocarpa HOM05D007622 ORTHO05D009409 3.6e-45 184.9 116 77.6
COL.COLO4_29125 Corchorus olitorius HOM05D000285 ORTHO05D009409 3.3e-43 178.3 104 79.8
CANSAT64G0926 Cannabis sativa HOM05D007622 ORTHO05D009409 4.3e-43 177.9 116 75.0
Ciclev10017228m.g Citrus clementina HOM05D007622 ORTHO05D009409 5.7e-43 177.6 117 75.2
Potri.001G344700 Populus trichocarpa HOM05D007622 ORTHO05D009409 9.7e-43 176.8 116 75.9
CsaV3_5G027110 Cucumis sativus L. HOM05D007622 ORTHO05D009409 3.7e-42 174.9 117 73.5
Lj1g0022477 Lotus japonicus HOM05D007622 ORTHO05D009409 3.7e-42 174.9 125 73.6
ClCG09G019280 Citrullus lanatus HOM05D007622 ORTHO05D009409 1.4e-41 172.9 116 72.4
Sabra16G0223800 Salix brachista HOM05D007622 ORTHO05D009409 1.8e-41 172.6 116 73.3
MELO3C021583.2 Cucumis melo HOM05D007622 ORTHO05D009409 2.4e-41 172.2 117 72.6
Prupe.3G292200 Prunus persica HOM05D007622 ORTHO05D009409 2.4e-41 172.2 116 72.4
CiPaw.04G028800 Carya illinoinensis HOM05D007622 ORTHO05D009409 3.1e-41 171.8 116 69.8
Gohir.D07G230100 Gossypium hirsutum HOM05D007622 ORTHO05D009409 3.1e-41 171.8 109 76.1
Gorai.001G265400 Gossypium raimondii HOM05D007622 ORTHO05D009409 3.1e-41 171.8 109 76.1
Gohir.A07G223400 Gossypium hirsutum HOM05D007622 ORTHO05D009409 4.1e-41 171.4 109 75.2
Duzib147G0488 Durio zibethinus HOM05D007622 ORTHO05D009409 5.3e-41 171.0 104 78.8
Sed0017852 Sechium edule HOM05D007622 ORTHO05D009409 6.9e-41 170.6 116 71.6
QL02p074426 Quercus lobata HOM05D007622 ORTHO05D009409 9.1e-41 170.2 117 70.9
PGR083G1671 Punica granatum HOM05D007622 ORTHO05D009409 1.5e-40 169.5 116 69.8
Manes.15G151000 Manihot esculenta HOM05D007622 ORTHO05D009409 2.6e-40 168.7 116 72.4
Eucgr.J02247 Eucalyptus grandis HOM05D007622 ORTHO05D009409 1.0e-39 166.8 99 79.8
Cc07_g01640 Coffea canephora HOM05D007622 ORTHO05D009409 1.7e-39 166.0 100 76.0
THA.LOC104805368 Tarenaya hassleriana HOM05D007622 ORTHO05D009409 1.7e-39 166.0 117 67.5
MSTRG.15530 Avicennia marina HOM05D007622 ORTHO05D009409 2.2e-39 165.6 99 78.8
DCAR_001440 Daucus carota HOM05D007622 ORTHO05D009409 2.9e-39 165.2 113 70.8
GSVIVG01032401001 Vitis vinifera HOM05D007622 ORTHO05D009409 2.9e-39 165.2 104 76.9
Dinv35108 Davidia involucrata HOM05D007622 ORTHO05D009409 5.0e-39 164.5 99 79.8
TPR.G1098 Trifolium pratense HOM05D007622 ORTHO05D009409 5.0e-39 164.5 124 72.6
Oeu013968.1 Olea europaea HOM05D007622 ORTHO05D009409 8.5e-39 163.7 99 76.8
Zm00001eb425130 Zea mays HOM05D007622 ORTHO05D009409 1.4e-38 162.9 104 75.0
Ah.03g137040 Amaranthus hybridus HOM05D007622 ORTHO05D009409 2.5e-38 162.2 92 81.5
Aqoxy5G03768 Aquilegia oxysepala HOM05D007622 ORTHO05D009409 2.5e-38 162.2 109 71.6
Sopen02g037920 Solanum pennellii HOM05D007622 ORTHO05D009409 2.5e-38 162.2 104 75.0
Actinidia16945 Actinidia chinensis HOM05D007622 ORTHO05D009409 4.2e-38 161.4 92 80.4
PSO111G0004 Papaver somniferum HOM05D007622 ORTHO05D009409 4.2e-38 161.4 111 69.4
Solyc02g093350.3 Solanum lycopersicum HOM05D007622 ORTHO05D009409 4.2e-38 161.4 104 75.0
PGSC0003DMG400012602 Solanum tuberosum HOM05D007622 ORTHO05D009409 4.2e-38 161.4 104 75.0
Lsat_1_v5_gn_4_184040 Lactuca sativa HOM05D007622 ORTHO05D009409 7.2e-38 160.6 102 74.5
Nn4g22626 Nelumbo nucifera HOM05D007622 ORTHO05D009409 7.2e-38 160.6 99 77.8
TWI36G0684 Tripterygium wilfordii HOM05D007622 ORTHO05D009409 7.2e-38 160.6 116 69.0
MD17G1026500 Malus domestica HOM05D007622 ORTHO05D009409 1.2e-37 159.8 116 69.0
Thecc.04G017800 Theobroma cacao HOM05D007622 ORTHO05D009409 1.2e-37 159.8 109 71.6
CSS0000151 Camellia sinensis var. sinensis HOM05D007622 ORTHO05D009409 1.6e-37 159.5 82 89.0
CSS0044104 Camellia sinensis var. sinensis HOM05D007622 ORTHO05D009409 1.6e-37 159.5 82 89.0
Nitab4.5_0003318g0060 Nicotiana tabacum HOM05D007622 ORTHO05D009409 2.1e-37 159.1 104 74.0
Sc03g0007350 Simmondsia chinensis HOM05D007622 ORTHO05D009409 2.7e-37 158.7 94 78.7
Hund12976 Selenicereus undatus HOM05D007622 ORTHO05D009409 3.6e-37 158.3 109 71.6
Peaxi162Scf00129g01661 Petunia axillaris HOM05D007622 ORTHO05D009409 4.7e-37 157.9 104 74.0
SGA_v2.0_scaffold195G40817 Striga asiatica HOM05D007622 ORTHO05D009409 4.7e-37 157.9 113 70.8
CAN.G473.12 Capsicum annuum HOM05D007622 ORTHO05D009409 6.1e-37 157.5 104 72.1
CDE09G0341 Ceratophyllum demersum HOM05D007622 ORTHO05D009409 6.1e-37 157.5 116 66.4
SalBow1G5210 Salvia bowleyana HOM05D007622 ORTHO05D009409 6.1e-37 157.5 92 78.3
Nitab4.5_0001860g0100 Nicotiana tabacum HOM05D007622 ORTHO05D009409 1.8e-36 156.0 94 77.7
HanXRQChr09g0255201 Helianthus annuus HOM05D007622 ORTHO05D009409 2.3e-36 155.6 94 76.6
FAN05G3531 Fragaria x ananassa HOM05D007622 ORTHO05D009409 3.9e-36 154.8 116 65.5
CDE02G3805 Ceratophyllum demersum HOM05D007622 ORTHO05D009409 5.1e-36 154.5 100 71.0
FvH4_6g51480 Fragaria vesca HOM05D007622 ORTHO05D009409 6.7e-36 154.1 116 65.5
FAN02G2753 Fragaria x ananassa HOM05D007622 ORTHO05D009409 6.7e-36 154.1 116 65.5
FAN09G4241 Fragaria x ananassa HOM05D007622 ORTHO05D009409 6.7e-36 154.1 116 65.5
FAN14G0072 Fragaria x ananassa HOM05D007622 ORTHO05D009409 6.7e-36 154.1 116 65.5
Duzib264G0071 Durio zibethinus HOM05D007622 ORTHO05D009409 1.1e-35 153.3 94 76.6
ECA232G2324 Erigeron canadensis HOM05D007622 ORTHO05D009409 1.1e-35 153.3 102 72.5
Thhalv10027995m.g Eutrema salsugineum HOM05D007622 ORTHO05D009409 1.5e-35 152.9 116 63.8
Os04g0482900 Oryza sativa ssp. japonica HOM05D007622 ORTHO05D009409 2.0e-35 152.5 82 82.9
RcHm_v2.0_Chr2g0173121 Rosa chinensis HOM05D007622 ORTHO05D009409 2.0e-35 152.5 96 76.0
AL7G49320 Arabidopsis lyrata HOM05D007622 ORTHO05D009409 2.6e-35 152.1 99 69.7
PSO067G0063 Papaver somniferum HOM05D007622 ORTHO05D009409 2.6e-35 152.1 119 67.2
Atru.chr6.2402 Acer truncatum HOM05D007622 ORTHO05D009409 4.4e-35 151.4 117 69.2
AT5G40500 Arabidopsis thaliana HOM05D007622 ORTHO05D009409 5.7e-35 151.0 111 65.8
BcaB06g27524 Brassica carinata HOM05D007622 ORTHO05D009409 5.7e-35 151.0 116 63.8
Migut.H00074 Erythranthe guttata HOM05D007622 ORTHO05D009409 5.7e-35 151.0 116 63.8
Sp7g01380 Schrenkiella parvula HOM05D007622 ORTHO05D009409 7.4e-35 150.6 99 71.7
TAR629G2574 Trochodendron aralioides HOM05D007622 ORTHO05D009409 7.4e-35 150.6 104 71.2
A04p13550 Brassica napus HOM05D000285 ORTHO05D009409 1.3e-34 149.8 116 62.9
C04p47330 Brassica napus HOM05D000285 ORTHO05D009409 1.3e-34 149.8 116 62.9
BolC4t26334H Brassica oleracea HOM05D000285 ORTHO05D009409 1.3e-34 149.8 116 62.9
BraA04t17014Z Brassica rapa HOM05D000285 ORTHO05D009409 1.3e-34 149.8 116 62.9
EL10Ac6g14084 Beta vulgaris HOM05D007622 ORTHO05D009409 1.7e-34 149.4 94 72.3
Carub.0007s3502 Capsella rubella HOM05D007622 ORTHO05D009409 8.2e-34 147.1 99 69.7
SEGI_15693 Sequoiadendron giganteum HOM05D007622 ORTHO05D009409 2.7e-29 132.1 99 63.6
AagrBONN_evm.TU.Sc2ySwM_117.2472 Anthoceros agrestis HOM05D007622 ORTHO05D009409 6.7e-28 127.5 97 59.8
Rhsim08G0048800 Rhododendron simsii HOM05D007622 ORTHO05D009409 8.8e-28 127.1 116 61.2
Pp3c12_19400 Physcomitrium patens HOM05D007622 ORTHO05D009409 2.6e-27 125.6 100 58.0
Aa31LG9G1100 Aethionema arabicum HOM05D001812 ORTHO05D001874 1.7e-26 122.9 98 63.3
VMungo1383G1925 Vigna mungo HOM05D007622 ORTHO05D009409 3.7e-26 121.7 57 94.7
vmacro18290 Vaccinium macrocarpon HOM05D007622 ORTHO05D009409 1.8e-25 119.4 92 67.4
Psat3g166480 Pisum sativum HOM05D007622 ORTHO05D009409 1.3e-23 113.2 64 87.5
SMO367G1081 Selaginella moellendorffii HOM05D007622 ORTHO05D009409 1.3e-23 113.2 90 53.3
CBR_g34193 Chara braunii HOM05D007622 ORTHO05D009409 1.2e-21 106.7 81 56.8
TAR371G1070 Trochodendron aralioides HOM05D007622 ORTHO05D009409 2.7e-21 105.5 91 56.0
MD09G1025400 Malus domestica HOM05D007622 ORTHO05D009409 8.0e-21 104.0 60 81.7
Cre12.g498700 Chlamydomonas reinhardtii HOM05D007622 ORTHO05D009409 8.3e-18 94.0 77 53.2
PRCOL_00004665 Prasinoderma coloniale HOM05D007622 ORTHO05D009409 1.7e-10 69.7 93 31.2
vmacro18289 Vaccinium macrocarpon HOM05D007622 ORTHO05D009409 1.5e-06 56.6 32 71.9


User provided reference genes

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