Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.008G153400 Phaseolus vulgaris HOM05D003503 ORTHO05D003885 6.6e-61 237.3 127 100.0
Phvul.011G101601 Phaseolus vulgaris HOM05D003503 ORTHO05D003885 1.1e-47 193.4 110 94.5
Phvul.001G138700 Phaseolus vulgaris HOM05D003503 ORTHO05D003885 2.2e-16 89.4 103 53.4
VMungo1383G2219 Vigna mungo HOM05D003503 ORTHO05D003885 2.9e-16 89.0 103 53.4
Glyma.03G141800 Glycine max HOM05D003503 ORTHO05D003885 1.2e-14 83.6 83 60.2
CiPaw.10G029000 Carya illinoinensis HOM05D003503 ORTHO05D003885 2.3e-13 79.3 84 59.5
Glyma.19G144400 Glycine max HOM05D003503 ORTHO05D003885 2.3e-13 79.3 83 57.8
QL07p023685 Quercus lobata HOM05D003503 ORTHO05D003885 8.8e-13 77.4 84 57.1
QL07p023657 Quercus lobata HOM05D003503 ORTHO05D003885 1.1e-12 77.0 84 57.1
Ca_08494_v3 Cicer arietinum L. HOM05D003503 ORTHO05D003885 1.5e-12 76.6 107 50.5
Actinidia38570 Actinidia chinensis HOM05D003503 ORTHO05D003885 3.3e-12 75.5 84 56.0
TPR.G4785 Trifolium pratense HOM05D003503 ORTHO05D003885 9.7e-12 73.9 109 45.9
DCAR_024103 Daucus carota HOM05D003503 ORTHO05D003885 1.7e-11 73.2 96 49.0
DCAR_024104 Daucus carota HOM05D003503 ORTHO05D003885 6.3e-11 71.2 96 47.9
Manes.03G008800 Manihot esculenta HOM05D003503 ORTHO05D003885 8.2e-11 70.9 77 51.9
Haze_19934 Corylus avellana HOM05D003503 ORTHO05D003885 1.1e-10 70.5 86 52.3
Rhsim04G0098700 Rhododendron simsii HOM05D003503 ORTHO05D003885 1.1e-10 70.5 84 51.2
Ciclev10005700m.g Citrus clementina HOM05D003503 ORTHO05D003885 1.4e-10 70.1 109 44.0
Hma1.2p1_0174F.1_g077040 Hydrangea macrophylla HOM05D003503 ORTHO05D003885 1.8e-10 69.7 101 49.5
Cfa016885 Carpinus fangiana HOM05D003503 ORTHO05D003885 3.1e-10 68.9 86 51.2
Hma1.2p1_0640F.1_g194090 Hydrangea macrophylla HOM05D003503 ORTHO05D003885 3.1e-10 68.9 85 52.9
Manes.16G129700 Manihot esculenta HOM05D003503 ORTHO05D003885 4.1e-10 68.6 76 48.7
vmacro09100 Vaccinium macrocarpon HOM05D003503 ORTHO05D003885 4.1e-10 68.6 84 51.2
Actinidia17255 Actinidia chinensis HOM05D003503 ORTHO05D003885 9.1e-10 67.4 84 51.2
Actinidia20299 Actinidia chinensis HOM05D003503 ORTHO05D003885 1.2e-09 67.0 68 58.8
CARHR137300 Cardamine hirsuta HOM05D003503 ORTHO05D003885 1.2e-09 67.0 84 50.0
Thhalv10017150m.g Eutrema salsugineum HOM05D003503 ORTHO05D003885 1.2e-09 67.0 84 50.0
Aa31LG1G24010 Aethionema arabicum HOM05D003503 ORTHO05D003885 1.5e-09 66.6 84 51.2
Migut.K00058 Erythranthe guttata HOM05D003503 ORTHO05D003885 1.5e-09 66.6 84 50.0
AL4G40620 Arabidopsis lyrata HOM05D003503 ORTHO05D003885 2.0e-09 66.2 84 50.0
Carub.0004s2460 Capsella rubella HOM05D003503 ORTHO05D003885 2.0e-09 66.2 84 50.0
Haze_20095 Corylus avellana HOM05D003503 ORTHO05D003885 2.0e-09 66.2 75 52.0
Psat3g070200 Pisum sativum HOM05D003503 ORTHO05D003885 2.0e-09 66.2 73 54.8
MSTRG.26098 Avicennia marina HOM05D003503 ORTHO05D003885 2.6e-09 65.9 99 46.5
CSS0007658 Camellia sinensis var. sinensis HOM05D003503 ORTHO05D003885 2.6e-09 65.9 84 50.0
Cfa020096 Carpinus fangiana HOM05D003503 ORTHO05D003885 2.6e-09 65.9 75 52.0
AT2G42260 Arabidopsis thaliana HOM05D003503 ORTHO05D003885 3.4e-09 65.5 84 48.8
Sed0025913 Sechium edule HOM05D003503 ORTHO05D003885 3.4e-09 65.5 70 55.7
GSVIVG01033358001 Vitis vinifera HOM05D003503 ORTHO05D003885 3.4e-09 65.5 84 52.4
Medtr7g092570 Medicago truncatula HOM05D003503 ORTHO05D003885 4.5e-09 65.1 108 44.4
MSTRG.10833 Avicennia marina HOM05D003503 ORTHO05D003885 5.9e-09 64.7 74 51.4
A05p02800 Brassica napus HOM05D003503 ORTHO05D003885 5.9e-09 64.7 104 44.2
BraA05t19272Z Brassica rapa HOM05D003503 ORTHO05D003885 5.9e-09 64.7 104 44.2
SalBow6G1355 Salvia bowleyana HOM05D003503 ORTHO05D003885 5.9e-09 64.7 75 50.7
Sabra06G0041000 Salix brachista HOM05D003503 ORTHO05D003885 7.7e-09 64.3 84 52.4
FvH4_6g18600 Fragaria vesca HOM05D003503 ORTHO05D003885 1.0e-08 63.9 76 53.9
FAN05G1437 Fragaria x ananassa HOM05D003503 ORTHO05D003885 1.0e-08 63.9 76 53.9
FAN05G4212 Fragaria x ananassa HOM05D003503 ORTHO05D003885 1.0e-08 63.9 76 53.9
FAN09G1919 Fragaria x ananassa HOM05D003503 ORTHO05D003885 1.0e-08 63.9 76 53.9
FAN14G4545 Fragaria x ananassa HOM05D003503 ORTHO05D003885 1.0e-08 63.9 76 53.9
Lalb_Chr15g0078851 Lupinus albus HOM05D003503 ORTHO05D003885 1.0e-08 63.9 79 50.6
BcaC02g12471 Brassica carinata HOM05D003503 ORTHO05D003885 1.3e-08 63.5 104 43.3
BcaNung05887 Brassica carinata HOM05D003503 ORTHO05D003885 1.3e-08 63.5 104 43.3
C04p03390 Brassica napus HOM05D003503 ORTHO05D003885 1.3e-08 63.5 104 43.3
Lalb_Chr18g0047601 Lupinus albus HOM05D003503 ORTHO05D003885 1.3e-08 63.5 103 47.6
MD12G1062400 Malus domestica HOM05D003503 ORTHO05D003885 1.3e-08 63.5 84 53.6
Sp4g24440 Schrenkiella parvula HOM05D003503 ORTHO05D003885 1.3e-08 63.5 84 47.6
CiPaw.09G033400 Carya illinoinensis HOM05D003503 ORTHO05D003885 1.7e-08 63.2 84 50.0
FAN02G2343 Fragaria x ananassa HOM05D003503 ORTHO05D003885 2.2e-08 62.8 76 52.6
Potri.016G050300 Populus trichocarpa HOM05D003503 ORTHO05D003885 2.2e-08 62.8 67 55.2
TAR369G0624 Trochodendron aralioides HOM05D003503 ORTHO05D001307 2.2e-08 62.8 66 53.0
CSS0013310 Camellia sinensis var. sinensis HOM05D003503 ORTHO05D003885 2.9e-08 62.4 83 47.0
THA.LOC104802399 Tarenaya hassleriana HOM05D003503 ORTHO05D003885 2.9e-08 62.4 85 49.4
Potri.006G057800 Populus trichocarpa HOM05D003503 ORTHO05D003885 3.8e-08 62.0 67 53.7
BolC4t21976H Brassica oleracea HOM05D003503 ORTHO05D003885 5.0e-08 61.6 114 41.2
FAN23G1753 Fragaria x ananassa HOM05D003503 ORTHO05D003885 5.0e-08 61.6 77 54.5
FAN23G2494 Fragaria x ananassa HOM05D003503 ORTHO05D003885 5.0e-08 61.6 77 54.5
RcHm_v2.0_Chr3g0473161 Rosa chinensis HOM05D003503 ORTHO05D003885 5.0e-08 61.6 94 48.9
Eucgr.A02419 Eucalyptus grandis HOM05D003503 ORTHO05D003885 6.5e-08 61.2 68 55.9
FvH4_1g24920 Fragaria vesca HOM05D003503 ORTHO05D003885 6.5e-08 61.2 69 56.5
FAN26G0276 Fragaria x ananassa HOM05D003503 ORTHO05D003885 6.5e-08 61.2 71 54.9
FAN26G0411 Fragaria x ananassa HOM05D003503 ORTHO05D003885 6.5e-08 61.2 71 54.9
Cpa.g.sc85.98 Carica papaya HOM05D003503 ORTHO05D003885 8.5e-08 60.8 87 44.8
Cc06_g16370 Coffea canephora HOM05D003503 ORTHO05D003885 8.5e-08 60.8 67 53.7
Dinv18112 Davidia involucrata HOM05D003503 ORTHO05D003885 1.1e-07 60.5 77 49.4
Prupe.7G071700 Prunus persica HOM05D003503 ORTHO05D003885 1.1e-07 60.5 97 43.3
BcaB01g03443 Brassica carinata HOM05D002899 ORTHO05D003885 1.4e-07 60.1 77 45.5
MD14G1063100 Malus domestica HOM05D003503 ORTHO05D003885 1.4e-07 60.1 84 50.0
MELO3C023180.2 Cucumis melo HOM05D003503 ORTHO05D003885 1.9e-07 59.7 70 52.9
ECA248G0895 Erigeron canadensis HOM05D003503 ORTHO05D003885 1.9e-07 59.7 97 45.4
ECA248G2321 Erigeron canadensis HOM05D003503 ORTHO05D003885 1.9e-07 59.7 67 55.2
Sabra16G0053800 Salix brachista HOM05D003503 ORTHO05D003885 1.9e-07 59.7 103 41.7
SGA_v2.0_scaffold69G23080 Striga asiatica HOM05D003503 ORTHO05D003885 1.9e-07 59.7 84 47.6
CsaV3_4G010540 Cucumis sativus L. HOM05D003503 ORTHO05D003885 2.5e-07 59.3 70 52.9
HanXRQChr06g0176361 Helianthus annuus HOM05D003503 ORTHO05D003885 2.5e-07 59.3 67 52.2
Nitab4.5_0000016g0070 Nicotiana tabacum HOM05D003503 ORTHO05D003885 2.5e-07 59.3 68 52.9
Atru.chr1.937 Acer truncatum HOM05D003503 ORTHO05D003885 3.2e-07 58.9 68 54.4
Thhalv10006194m.g Eutrema salsugineum HOM05D003503 ORTHO05D003885 3.2e-07 58.9 97 42.3
Gohir.A11G313900 Gossypium hirsutum HOM05D003503 ORTHO05D003885 3.2e-07 58.9 103 38.8
Solyc10g080400.2 Solanum lycopersicum HOM05D003503 ORTHO05D003885 3.2e-07 58.9 72 48.6
Sopen10g030940 Solanum pennellii HOM05D003503 ORTHO05D003885 3.2e-07 58.9 72 48.6
TWI74G1092 Tripterygium wilfordii HOM05D003503 ORTHO05D003885 3.2e-07 58.9 113 43.4
CANSAT80G0280 Cannabis sativa HOM05D003503 ORTHO05D003885 4.2e-07 58.5 114 39.5
CANSAT80G2578 Cannabis sativa HOM05D003503 ORTHO05D003885 4.2e-07 58.5 114 39.5
HanXRQChr05g0132771 Helianthus annuus HOM05D003503 ORTHO05D003885 4.2e-07 58.5 99 44.4
Nitab4.5_0010571g0010 Nicotiana tabacum HOM05D003503 ORTHO05D003885 4.2e-07 58.5 68 52.9
RcHm_v2.0_Chr3g0473181 Rosa chinensis HOM05D003503 ORTHO05D003885 4.2e-07 58.5 69 56.5
SHI33674 Sapria himalayana HOM05D003503 ORTHO05D003885 4.2e-07 58.5 84 46.4
BcaNung04400 Brassica carinata HOM05D003503 ORTHO05D003885 5.5e-07 58.2 69 49.3
Peaxi162Scf00258g00220 Petunia axillaris HOM05D003503 ORTHO05D003885 5.5e-07 58.2 68 51.5
Sed0010654 Sechium edule HOM05D003503 ORTHO05D003885 5.5e-07 58.2 68 54.4
PGSC0003DMG402023713 Solanum tuberosum HOM05D003503 ORTHO05D003885 5.5e-07 58.2 72 47.2
CARHR168170 Cardamine hirsuta HOM05D003503 ORTHO05D003885 7.2e-07 57.8 105 37.1
ClCG04G000340 Citrullus lanatus HOM05D003503 ORTHO05D003885 7.2e-07 57.8 70 50.0
Migut.J01803 Erythranthe guttata HOM05D003503 ORTHO05D003885 7.2e-07 57.8 71 52.1
AL5G39520 Arabidopsis lyrata HOM05D003503 ORTHO05D003885 1.2e-06 57.0 85 47.1
Dinv24108 Davidia involucrata HOM05D003503 ORTHO05D000616 1.2e-06 57.0 70 50.0
Gorai.007G361800 Gossypium raimondii HOM05D003503 ORTHO05D003885 1.2e-06 57.0 103 38.8
SGA_v2.0_scaffold105G30470 Striga asiatica HOM05D003503 ORTHO05D003885 1.2e-06 57.0 85 45.9
THA.LOC104824461 Tarenaya hassleriana HOM05D003503 ORTHO05D003885 1.2e-06 57.0 85 43.5
AT3G57860 Arabidopsis thaliana HOM05D003503 ORTHO05D003885 1.6e-06 56.6 85 45.9
HanXRQChr15g0483571 Helianthus annuus HOM05D003503 ORTHO05D003885 1.6e-06 56.6 86 46.5
Peaxi162Scf00285g00427 Petunia axillaris HOM05D003503 ORTHO05D003885 1.6e-06 56.6 68 51.5
Duzib106G0586 Durio zibethinus HOM05D003503 ORTHO05D003885 2.7e-06 55.8 102 37.3
Thecc.06G029500 Theobroma cacao HOM05D003503 ORTHO05D003885 2.7e-06 55.8 101 38.6
Carub.0005s2470 Capsella rubella HOM05D003503 ORTHO05D003885 3.6e-06 55.5 85 45.9
Gohir.D11G331100 Gossypium hirsutum HOM05D003503 ORTHO05D003885 4.7e-06 55.1 103 37.9
Peaxi162Scf00406g00711 Petunia axillaris HOM05D003503 ORTHO05D003885 6.1e-06 54.7 68 51.5
Thecc.05G166300 Theobroma cacao HOM05D003503 ORTHO05D003885 6.1e-06 54.7 102 38.2
arahy.Tifrunner.gnm1.ann1.P0WGR4 Arachis hypogaea HOM05D003503 ORTHO05D003885 7.9e-06 54.3 95 44.2
BcaC07g40160 Brassica carinata HOM05D003503 ORTHO05D003885 7.9e-06 54.3 87 41.4
DCAR_020468 Daucus carota HOM05D003503 ORTHO05D003885 7.9e-06 54.3 74 48.6
PGR004G1207 Punica granatum HOM05D003503 ORTHO05D003885 7.9e-06 54.3 86 40.7


User provided reference genes

Program Settings