Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.008G153000 Phaseolus vulgaris HOM05D007214 ORTHO05D008907 6.1e-127 457.6 247 100.0
Glyma.04G176300 Glycine max HOM05D007214 ORTHO05D008907 1.2e-90 337.0 236 78.8
Lalb_Chr10g0093331 Lupinus albus HOM05D007214 ORTHO05D008907 1.2e-74 283.9 251 64.9
LjContig00155g0009682 Lotus japonicus HOM05D007214 ORTHO05D008907 2.9e-73 279.3 223 69.5
Glyma.06G189000 Glycine max HOM05D007214 ORTHO05D008907 2.1e-71 273.1 231 68.4
TPR.G30823 Trifolium pratense HOM05D007214 ORTHO05D008907 4.3e-64 248.8 223 62.8
Medtr7g034275 Medicago truncatula HOM05D007214 ORTHO05D008907 4.7e-63 245.4 236 61.0
arahy.Tifrunner.gnm1.ann1.X6PLX1 Arachis hypogaea HOM05D007214 ORTHO05D008907 6.8e-62 241.5 236 57.6
arahy.Tifrunner.gnm1.ann1.QRE12D Arachis hypogaea HOM05D007214 ORTHO05D008907 2.6e-61 239.6 236 57.6
Ca_08472_v3 Cicer arietinum L. HOM05D007214 ORTHO05D008907 7.8e-58 228.0 192 66.1
FAN09G3859 Fragaria x ananassa HOM05D007214 ORTHO05D008907 4.4e-45 185.7 224 49.1
CiPaw.04G066400 Carya illinoinensis HOM05D007214 ORTHO05D008907 7.6e-45 184.9 217 51.2
TPR.G39121 Trifolium pratense HOM05D007214 ORTHO05D008907 2.2e-44 183.3 246 48.0
CANSAT64G0721 Cannabis sativa HOM05D007214 ORTHO05D008907 2.7e-42 176.4 222 48.2
Ciclev10012639m.g Citrus clementina HOM05D007214 ORTHO05D008907 2.3e-41 173.3 223 48.9
Potri.017G074100 Populus trichocarpa HOM05D007214 ORTHO05D008907 8.7e-41 171.4 224 47.8
Psat3g038600 Pisum sativum HOM05D007214 ORTHO05D008907 1.3e-36 157.5 146 61.0
Potri.001G350100 Populus trichocarpa HOM05D007214 ORTHO05D008907 8.4e-36 154.8 223 44.8
AUR62018331 Chenopodium quinoa HOM05D007214 ORTHO05D008907 9.3e-35 151.4 220 43.6
FAN02G1556 Fragaria x ananassa HOM05D007214 ORTHO05D008907 2.7e-34 149.8 235 44.3
AUR62030556 Chenopodium quinoa HOM05D007214 ORTHO05D008907 6.6e-33 145.2 220 41.8
Nitab4.5_0001239g0030 Nicotiana tabacum HOM05D007214 ORTHO05D008907 1.1e-32 144.4 182 44.5
PSO063G2579 Papaver somniferum HOM05D007214 ORTHO05D008907 7.3e-32 141.7 226 41.6
Manes.17G117200 Manihot esculenta HOM05D007214 ORTHO05D008907 2.1e-31 140.2 219 41.6
CSS0043780 Camellia sinensis var. sinensis HOM05D007214 ORTHO05D008907 3.6e-31 139.4 227 41.4
Duzib187G0634 Durio zibethinus HOM05D007214 ORTHO05D008907 6.9e-30 135.2 220 40.9
FAN14G2712 Fragaria x ananassa HOM05D007214 ORTHO05D008907 1.5e-29 134.0 235 40.4
Sopen02g032170 Solanum pennellii HOM05D007214 ORTHO05D008907 2.0e-29 133.7 221 38.9
Sabra16G0229500 Salix brachista HOM05D007214 ORTHO05D008907 3.4e-29 132.9 228 41.2
Peaxi162Scf00129g00734 Petunia axillaris HOM05D007214 ORTHO05D008907 4.5e-29 132.5 212 40.6
Solyc02g087420.3 Solanum lycopersicum HOM05D007214 ORTHO05D008907 4.5e-29 132.5 220 37.7
RcHm_v2.0_Chr2g0169771 Rosa chinensis HOM05D007214 ORTHO05D008907 1.1e-27 127.9 249 38.2
Aqoxy3G00863 Aquilegia oxysepala HOM05D007214 ORTHO05D008907 1.6e-26 124.0 234 37.2
Zm00001eb280040 Zea mays HOM05D007214 ORTHO05D008907 2.1e-26 123.6 226 35.0
TPR.G39060 Trifolium pratense HOM05D007214 ORTHO05D008907 1.0e-25 121.3 144 50.0
Sc11g0006840 Simmondsia chinensis HOM05D007214 ORTHO05D008907 6.7e-25 118.6 121 52.1
CSS0027558 Camellia sinensis var. sinensis HOM05D007214 ORTHO05D008907 5.6e-24 115.5 227 37.0
MD09G1042000 Malus domestica HOM05D007214 ORTHO05D008907 8.1e-23 111.7 225 36.9
Gorai.001G258300 Gossypium raimondii HOM05D007214 ORTHO05D008907 9.0e-22 108.2 220 37.3
CARHR292610 Cardamine hirsuta HOM05D007214 ORTHO05D008907 1.2e-21 107.8 223 33.6
A06p40570 Brassica napus HOM05D007214 ORTHO05D008907 3.4e-21 106.3 221 33.5
Dinv33685 Davidia involucrata HOM05D007214 ORTHO05D008907 3.4e-21 106.3 237 36.7
HPP92_010494 Vanilla planifolia HOM05D007214 ORTHO05D008907 3.4e-21 106.3 227 35.2
AT3G28370 Arabidopsis thaliana HOM05D007214 ORTHO05D008907 1.0e-20 104.8 225 35.1
MBI15_g38192_MAGBIO Magnolia biondii HOM05D007214 ORTHO05D008907 1.7e-20 104.0 110 54.5
Prupe.3G275800 Prunus persica HOM05D007214 ORTHO05D008907 2.9e-20 103.2 222 35.6
QL02p079285 Quercus lobata HOM05D007214 ORTHO05D008907 1.4e-19 100.9 239 33.1
Nn4g22956 Nelumbo nucifera HOM05D007214 ORTHO05D008907 2.5e-19 100.1 227 33.9
SGA_v2.0_scaffold135G34803 Striga asiatica HOM05D007214 ORTHO05D008907 5.5e-19 99.0 220 33.6
A06p40600 Brassica napus HOM05D007214 ORTHO05D008907 1.2e-18 97.8 239 32.2
BraA06t26979Z Brassica rapa HOM05D007214 ORTHO05D008907 1.6e-18 97.4 240 32.5
Cpa.g.sc14.68 Carica papaya HOM05D007214 ORTHO05D008907 2.1e-18 97.1 129 44.2
Gohir.A07G216951 Gossypium hirsutum HOM05D007214 ORTHO05D008907 2.7e-18 96.7 220 35.9
Sp2g17170 Schrenkiella parvula HOM05D007214 ORTHO05D008907 2.7e-18 96.7 215 32.1
DCAR_011179 Daucus carota HOM05D007214 ORTHO05D008907 4.6e-18 95.9 204 33.8
TWI12G0421 Tripterygium wilfordii HOM05D007214 ORTHO05D008907 4.6e-18 95.9 217 34.6
C07p37400 Brassica napus HOM05D007214 ORTHO05D008907 6.0e-18 95.5 241 32.0
FvH4_6g49740 Fragaria vesca HOM05D007214 ORTHO05D008907 6.0e-18 95.5 219 34.7
RhsimUnG0169100 Rhododendron simsii HOM05D007214 ORTHO05D008907 6.0e-18 95.5 221 33.0
BcaC06g33744 Brassica carinata HOM05D007214 ORTHO05D008907 7.9e-18 95.1 216 31.5
AL5G17980 Arabidopsis lyrata HOM05D007214 ORTHO05D008907 3.0e-17 93.2 225 33.3
CAN.G206.82 Capsicum annuum HOM05D007214 ORTHO05D008907 5.1e-17 92.4 220 33.2
Ah.12g065280 Amaranthus hybridus HOM05D007214 ORTHO05D008907 6.7e-17 92.0 216 32.4
BolC7t44250H Brassica oleracea HOM05D007214 ORTHO05D008907 1.1e-16 91.3 246 31.7
Manes.17G117300 Manihot esculenta HOM05D007214 ORTHO05D008907 1.1e-16 91.3 153 40.5
Sed0019253 Sechium edule HOM05D007214 ORTHO05D008907 1.3e-15 87.8 241 29.9
Cc07_g02800 Coffea canephora HOM05D007214 ORTHO05D008907 1.6e-15 87.4 220 33.2
Nitab4.5_0002265g0100 Nicotiana tabacum HOM05D007214 ORTHO05D008907 2.1e-15 87.0 183 33.3
Sabra17G0065100 Salix brachista HOM05D007214 ORTHO05D008907 2.1e-15 87.0 97 47.4
Aa31LG2G4670 Aethionema arabicum HOM05D007214 ORTHO05D008907 6.3e-15 85.5 221 32.1
Rhsim10G0029100 Rhododendron simsii HOM05D007214 ORTHO05D008907 8.2e-15 85.1 218 33.5
CDE02G1584 Ceratophyllum demersum HOM05D007214 ORTHO05D008907 1.1e-14 84.7 116 42.2
Oeu060587.1 Olea europaea HOM05D007214 ORTHO05D008907 5.3e-14 82.4 168 33.9
TAR629G1667 Trochodendron aralioides HOM05D000068 ORTHO05D000084 9.0e-14 81.6 180 32.2
Gohir.D07G223900 Gossypium hirsutum HOM05D007214 ORTHO05D008907 1.5e-13 80.9 192 34.4
Eucgr.J02159 Eucalyptus grandis HOM05D007214 ORTHO05D008907 2.0e-13 80.5 106 44.3
SalBow1G8362 Salvia bowleyana HOM05D007214 ORTHO05D008907 2.0e-13 80.5 224 30.4
Thecc.04G070100 Theobroma cacao HOM05D007214 ORTHO05D008907 2.0e-13 80.5 192 32.8
Lsat_1_v5_gn_4_180400 Lactuca sativa HOM05D007214 ORTHO05D008907 3.4e-13 79.7 203 29.1
TAR629G0039 Trochodendron aralioides HOM05D000068 ORTHO05D008907 3.8e-12 76.3 82 50.0
MELO3C030968.2 Cucumis melo HOM05D007214 ORTHO05D008907 1.1e-11 74.7 92 41.3
ECA232G1410 Erigeron canadensis HOM05D007214 ORTHO05D008907 2.5e-11 73.6 233 28.3
Migut.H00870 Erythranthe guttata HOM05D007214 ORTHO05D008907 7.2e-11 72.0 218 26.6
THA.LOC104805424 Tarenaya hassleriana HOM05D007214 ORTHO05D008907 1.2e-10 71.2 217 30.9
Nitab4.5_0001239g0020 Nicotiana tabacum HOM05D005549 ORTHO05D006771 1.6e-10 70.9 214 31.3
Carub.0005s0686 Capsella rubella HOM05D007214 ORTHO05D008907 2.7e-10 70.1 215 28.4
CsaV3_3G041890 Cucumis sativus L. HOM05D062301 ORTHO05D008907 7.9e-10 68.6 218 25.2
Os06g0235900 Oryza sativa ssp. japonica HOM05D007214 ORTHO05D008907 1.3e-09 67.8 106 39.6
GSVIVG01032574001 Vitis vinifera HOM05D007214 ORTHO05D008907 1.8e-09 67.4 100 43.0
Psat3g176600 Pisum sativum HOM05D007214 ORTHO05D008907 3.9e-09 66.2 62 61.3
SGA_v2.0_scaffold205G41734 Striga asiatica HOM05D007214 ORTHO05D008907 1.1e-08 64.7 203 27.6
Sabra07G0063000 Salix brachista HOM05D007214 ORTHO05D008907 1.9e-08 63.9 69 49.3
Atru.chr8.2432 Acer truncatum HOM05D007214 ORTHO05D008907 3.3e-08 63.2 159 31.4
FAN05G0748 Fragaria x ananassa HOM05D007214 ORTHO05D008907 4.3e-08 62.8 103 41.7
COL.COLO4_36999 Corchorus olitorius HOM05D007214 ORTHO05D008907 9.7e-08 61.6 207 30.0
Thhalv10004882m.g Eutrema salsugineum HOM05D007214 ORTHO05D008907 2.2e-07 60.5 221 29.0
Dinv35004 Davidia involucrata HOM05D007214 ORTHO05D008907 3.7e-07 59.7 205 28.3
BcaC06g30923 Brassica carinata HOM05D007214 ORTHO05D008907 1.1e-06 58.2 221 25.8
Sabra17G0063300 Salix brachista HOM05D007214 ORTHO05D008907 1.8e-06 57.4 75 49.3
PGSC0003DMG400001300 Solanum tuberosum HOM05D007214 ORTHO05D008907 4.1e-06 56.2 79 40.5
unitig_746.g26578 Utricularia gibba HOM05D007214 ORTHO05D008907 4.1e-06 56.2 53 58.5
Rhsim12G0075800 Rhododendron simsii HOM05D000660 ORTHO05D008907 9.0e-06 55.1 83 43.4


User provided reference genes

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