Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.008G151600 Phaseolus vulgaris HOM05D007296 ORTHO05D009201 1.6e-49 199.1 102 100.0
Glyma.16G068200 Glycine max HOM05D007296 ORTHO05D009201 1.3e-38 162.9 101 83.2
VMungo1383G0878 Vigna mungo HOM05D007296 ORTHO05D009201 1.3e-38 162.9 101 85.1
Glyma.19G078800 Glycine max HOM05D007296 ORTHO05D009201 1.2e-36 156.4 101 80.2
Lj1g0014101 Lotus japonicus HOM05D007296 ORTHO05D009201 3.7e-30 134.8 102 68.6
Psat3g172000 Pisum sativum HOM05D007296 ORTHO05D009201 1.4e-29 132.9 100 68.0
Ca_06610_v3 Cicer arietinum L. HOM05D007296 ORTHO05D009201 1.6e-28 129.4 98 68.4
Ca_30727_v3 Cicer arietinum L. HOM05D007296 ORTHO05D009201 1.6e-28 129.4 98 68.4
Medtr7g033080 Medicago truncatula HOM05D007296 ORTHO05D009201 7.7e-28 127.1 97 67.0
TPR.G1088 Trifolium pratense HOM05D007296 ORTHO05D009201 5.0e-27 124.4 100 63.0
Lalb_Chr22g0360681 Lupinus albus HOM05D007296 ORTHO05D009201 1.5e-26 122.9 100 62.0
QL02p073829 Quercus lobata HOM05D007296 ORTHO05D009201 1.3e-22 109.8 100 57.0
CiPaw.03G046500 Carya illinoinensis HOM05D007296 ORTHO05D009201 2.4e-21 105.5 98 53.1
Cfa007330 Carpinus fangiana HOM05D007296 ORTHO05D009201 1.6e-20 102.8 96 53.1
Haze_14767 Corylus avellana HOM05D007296 ORTHO05D009201 5.9e-20 100.9 96 52.1
Potri.001G342100 Populus trichocarpa HOM05D007296 ORTHO05D009201 6.6e-19 97.4 90 57.8
Atru.chr6.2441 Acer truncatum HOM05D007296 ORTHO05D009201 1.5e-18 96.3 83 65.1
Thecc.04G021100 Theobroma cacao HOM05D007296 ORTHO05D009201 4.3e-18 94.7 88 53.4
CiPaw.04G030100 Carya illinoinensis HOM05D007296 ORTHO05D009201 5.6e-18 94.4 90 57.8
Ciclev10017118m.g Citrus clementina HOM05D007296 ORTHO05D009201 4.7e-17 91.3 89 57.3
PSO017G3033 Papaver somniferum HOM05D007296 ORTHO05D009201 2.3e-16 89.0 92 47.8
Glyma.19G051600 Glycine max HOM05D007296 ORTHO05D009201 8.9e-16 87.0 98 50.0
Duzib187G0331 Durio zibethinus HOM05D007296 ORTHO05D009201 1.2e-15 86.7 88 44.3
Glyma.05G115500 Glycine max HOM05D007296 ORTHO05D009201 1.2e-15 86.7 98 49.0
Manes.15G152600 Manihot esculenta HOM05D007296 ORTHO05D009201 1.2e-15 86.7 94 52.1
Phvul.004G061700 Phaseolus vulgaris HOM05D007296 ORTHO05D009201 2.0e-15 85.9 98 46.9
Prupe.3G295100 Prunus persica HOM05D007296 ORTHO05D009201 2.0e-15 85.9 79 57.0
Hma1.2p1_0818F.1_g223340 Hydrangea macrophylla HOM05D007296 ORTHO05D009201 5.8e-15 84.3 90 53.3
Gohir.A09G030400 Gossypium hirsutum HOM05D007296 ORTHO05D009201 2.9e-14 82.0 89 47.2
TAR371G0818 Trochodendron aralioides HOM05D007296 ORTHO05D009201 4.9e-14 81.3 90 45.6
Nn3g16657 Nelumbo nucifera HOM05D007296 ORTHO05D009201 6.4e-14 80.9 89 46.1
CSS0008661 Camellia sinensis var. sinensis HOM05D007296 ORTHO05D009201 8.3e-14 80.5 96 45.8
DCAR_021738 Daucus carota HOM05D000631 ORTHO05D000524 8.3e-14 80.5 72 54.2
Eucgr.I01721 Eucalyptus grandis HOM05D007296 ORTHO05D009201 8.3e-14 80.5 91 52.7
Gohir.D09G030000 Gossypium hirsutum HOM05D007296 ORTHO05D009201 8.3e-14 80.5 89 46.1
MELO3C021597.2 Cucumis melo HOM05D007296 ORTHO05D009201 1.1e-13 80.1 65 58.5
CsaV3_5G026960 Cucumis sativus L. HOM05D007296 ORTHO05D009201 1.1e-13 80.1 65 60.0
Sabra15G0109100 Salix brachista HOM05D000631 ORTHO05D000524 1.1e-13 80.1 98 44.9
ClCG09G019420 Citrullus lanatus HOM05D007296 ORTHO05D009201 2.4e-13 79.0 84 47.6
Lsat_1_v5_gn_0_6101 Lactuca sativa HOM05D007296 ORTHO05D009201 4.1e-13 78.2 70 61.4
Nn4g22550 Nelumbo nucifera HOM05D007296 ORTHO05D009201 7.0e-13 77.4 87 43.7
Cpa.g.sc130.72 Carica papaya HOM05D007296 ORTHO05D009201 9.2e-13 77.0 107 45.8
Cc02_g32290 Coffea canephora HOM05D007296 ORTHO05D009201 9.2e-13 77.0 90 48.9
Dinv33417 Davidia involucrata HOM05D007296 ORTHO05D009201 1.2e-12 76.6 103 45.6
Sed0024202 Sechium edule HOM05D007296 ORTHO05D009201 1.6e-12 76.3 92 45.7
Prupe.5G162900 Prunus persica HOM05D007296 ORTHO05D009201 3.5e-12 75.1 70 47.1
Lsat_1_v5_gn_2_91081 Lactuca sativa HOM05D007296 ORTHO05D009201 7.8e-12 73.9 89 48.3
Aqoxy3G01286 Aquilegia oxysepala HOM05D007296 ORTHO05D009201 1.0e-11 73.6 94 38.3
Ciclev10022926m.g Citrus clementina HOM05D007296 ORTHO05D009201 1.0e-11 73.6 98 43.9
Sc16g0004380 Simmondsia chinensis HOM05D007296 ORTHO05D009201 1.0e-11 73.6 72 54.2
Lj4g0005296 Lotus japonicus HOM05D007296 ORTHO05D009201 1.3e-11 73.2 80 47.5
ATR0199G042 Amborella trichopoda HOM05D007296 ORTHO05D009201 3.0e-11 72.0 74 50.0
CAN.G473.34 Capsicum annuum HOM05D007296 ORTHO05D009201 3.9e-11 71.6 98 38.8
CiPaw.11G015200 Carya illinoinensis HOM05D007296 ORTHO05D009201 5.0e-11 71.2 83 49.4
MBI10_g42976_MAGBIO Magnolia biondii HOM05D007296 ORTHO05D009201 6.6e-11 70.9 81 48.1
Aqoxy5G03689 Aquilegia oxysepala HOM05D007296 ORTHO05D009201 8.6e-11 70.5 82 40.2
FAN02G1968 Fragaria x ananassa HOM05D007296 ORTHO05D009201 8.6e-11 70.5 69 53.6
FAN09G0682 Fragaria x ananassa HOM05D007296 ORTHO05D009201 1.5e-10 69.7 69 55.1
SGA_v2.0_scaffold47G17522 Striga asiatica HOM05D000631 ORTHO05D000524 1.9e-10 69.3 88 50.0
TAR374G0807 Trochodendron aralioides HOM05D007296 ORTHO05D009201 1.9e-10 69.3 89 40.4
C09p62750 Brassica napus HOM05D007296 ORTHO05D009201 4.3e-10 68.2 87 49.4
BolC9t59112H Brassica oleracea HOM05D007296 ORTHO05D009201 4.3e-10 68.2 87 49.4
Aqoxy7G03797 Aquilegia oxysepala HOM05D007296 ORTHO05D009201 5.6e-10 67.8 77 45.5
PGR142G0831 Punica granatum HOM05D007296 ORTHO05D009201 5.6e-10 67.8 67 52.2
SalBow1G6940 Salvia bowleyana HOM05D007296 ORTHO05D009201 5.6e-10 67.8 83 47.0
TWI56G0033 Tripterygium wilfordii HOM05D007296 ORTHO05D009201 5.6e-10 67.8 102 45.1
Manes.14G057736 Manihot esculenta HOM05D007296 ORTHO05D009201 9.5e-10 67.0 91 41.8
FvH4_6g51980 Fragaria vesca HOM05D007296 ORTHO05D009201 1.6e-09 66.2 69 50.7
FAN14G0692 Fragaria x ananassa HOM05D007296 ORTHO05D009201 1.6e-09 66.2 69 50.7
PGSC0003DMG400012614 Solanum tuberosum HOM05D007296 ORTHO05D009201 1.6e-09 66.2 97 42.3
Aa31LG11G15190 Aethionema arabicum HOM05D007296 ORTHO05D009201 2.1e-09 65.9 92 47.8
Ah.12g055220 Amaranthus hybridus HOM05D007296 ORTHO05D009201 2.8e-09 65.5 73 46.6
Ca_30679_v3 Cicer arietinum L. HOM05D007296 ORTHO05D009201 3.6e-09 65.1 81 40.7
Carub.0006s1259 Capsella rubella HOM05D007296 ORTHO05D009201 8.0e-09 63.9 74 51.4
Thhalv10014918m.g Eutrema salsugineum HOM05D007296 ORTHO05D009201 8.0e-09 63.9 72 50.0
CARHR198900 Cardamine hirsuta HOM05D007296 ORTHO05D009201 1.1e-08 63.5 73 53.4
Sp6g29610 Schrenkiella parvula HOM05D007296 ORTHO05D009201 1.4e-08 63.2 74 51.4
A10p24110 Brassica napus HOM05D007296 ORTHO05D009201 1.8e-08 62.8 102 44.1
BraA10t44476Z Brassica rapa HOM05D007296 ORTHO05D009201 1.8e-08 62.8 102 44.1
SGA_v2.0_scaffold18G08254 Striga asiatica HOM05D007296 ORTHO05D009201 1.8e-08 62.8 75 49.3
AT5G14410 Arabidopsis thaliana HOM05D007296 ORTHO05D009201 2.3e-08 62.4 82 51.2
Migut.H00030 Erythranthe guttata HOM05D007296 ORTHO05D009201 2.3e-08 62.4 112 42.0
FAN05G3275 Fragaria x ananassa HOM05D007296 ORTHO05D009201 2.3e-08 62.4 105 41.9
Thecc.03G117800 Theobroma cacao HOM05D007296 ORTHO05D009201 2.3e-08 62.4 92 40.2
ECA246G1504 Erigeron canadensis HOM05D007296 ORTHO05D009201 3.1e-08 62.0 89 42.7
BcaB08g36986 Brassica carinata HOM05D007296 ORTHO05D009201 4.0e-08 61.6 67 50.7
AL6G25130 Arabidopsis lyrata HOM05D007296 ORTHO05D009201 5.2e-08 61.2 82 50.0
Phvul.003G206500 Phaseolus vulgaris HOM05D007296 ORTHO05D009201 5.2e-08 61.2 90 35.6
DCAR_015066 Daucus carota HOM05D007296 ORTHO05D009201 6.8e-08 60.8 87 41.4
Lalb_Chr07g0183081 Lupinus albus HOM05D007296 ORTHO05D009201 6.8e-08 60.8 77 42.9
RcHm_v2.0_Chr2g0173451 Rosa chinensis HOM05D007296 ORTHO05D009201 6.8e-08 60.8 72 47.2
THA.LOC104821171 Tarenaya hassleriana HOM05D007296 ORTHO05D009201 1.2e-07 60.1 77 46.8
Gohir.D07G059700 Gossypium hirsutum HOM05D007296 ORTHO05D009201 2.0e-07 59.3 74 41.9
Gorai.001G063200 Gossypium raimondii HOM05D007296 ORTHO05D009201 2.0e-07 59.3 74 41.9
COL.COLO4_30221 Corchorus olitorius HOM05D007296 ORTHO05D009201 2.6e-07 58.9 88 40.9
Sopen02g038130 Solanum pennellii HOM05D007296 ORTHO05D009201 2.6e-07 58.9 82 41.5
Gohir.A07G055400 Gossypium hirsutum HOM05D007296 ORTHO05D009201 4.4e-07 58.2 74 40.5
EL10Ac5g12075 Beta vulgaris HOM05D007296 ORTHO05D009201 7.5e-07 57.4 82 45.1
Solyc02g093525.1 Solanum lycopersicum HOM05D007296 ORTHO05D009201 2.9e-06 55.5 82 39.0
SalBow7G1031 Salvia bowleyana HOM05D007296 ORTHO05D009201 3.7e-06 55.1 74 44.6
SGA_v2.0_scaffold135G34923 Striga asiatica HOM05D007296 ORTHO05D009201 4.9e-06 54.7 74 43.2
QL10p006090 Quercus lobata HOM05D007296 ORTHO05D009201 8.3e-06 53.9 91 35.2


User provided reference genes

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