Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.008G143700 Phaseolus vulgaris HOM05D006954 ORTHO05D008729 2.0e-306 1055.0 579 100.0
Glyma.11G167382 Glycine max HOM05D006954 ORTHO05D008729 2.5e-200 702.6 583 70.5
VMungo1383G2724 Vigna mungo HOM05D006954 ORTHO05D008729 7.4e-192 674.5 464 80.6
Lalb_Chr01g0021361 Lupinus albus HOM05D006954 ORTHO05D008729 8.1e-90 335.5 516 49.4
Phvul.010G071500 Phaseolus vulgaris HOM05D006954 ORTHO05D008729 2.1e-77 294.3 563 42.8
Lj3g0019070 Lotus japonicus HOM05D006954 ORTHO05D008729 2.5e-70 270.8 421 45.8
Glyma.01G134400 Glycine max HOM05D006954 ORTHO05D008729 4.6e-69 266.5 536 43.5
Lalb_Chr07g0190311 Lupinus albus HOM05D006954 ORTHO05D008729 2.3e-68 264.2 456 42.8
Glyma.03G033300 Glycine max HOM05D006954 ORTHO05D008729 6.3e-66 256.1 538 42.6
CiPaw.14G025200 Carya illinoinensis HOM05D006954 ORTHO05D008729 8.5e-63 245.7 463 41.9
QL04p036098 Quercus lobata HOM05D006954 ORTHO05D008729 4.6e-61 240.0 473 40.0
Cfa011147 Carpinus fangiana HOM05D001088 ORTHO05D002099 2.3e-60 237.7 567 36.5
QL04p036448 Quercus lobata HOM05D006954 ORTHO05D008729 3.9e-60 236.9 477 39.2
QL04p036667 Quercus lobata HOM05D006954 ORTHO05D008729 3.9e-60 236.9 477 38.4
Haze_02712 Corylus avellana HOM05D006954 ORTHO05D008729 1.5e-59 235.0 450 40.4
Prupe.2G137000 Prunus persica HOM05D006954 ORTHO05D008729 1.7e-58 231.5 436 38.8
MD07G1114400 Malus domestica HOM05D006954 ORTHO05D008729 1.1e-57 228.8 575 33.9
arahy.Tifrunner.gnm1.ann1.LN378K Arachis hypogaea HOM05D006954 ORTHO05D008729 1.5e-56 224.9 598 37.1
arahy.Tifrunner.gnm1.ann1.UR8A7Q Arachis hypogaea HOM05D006954 ORTHO05D008729 3.4e-56 223.8 449 37.6
MD02G1210900 Malus domestica HOM05D006954 ORTHO05D008729 1.3e-55 221.9 527 35.5
TWI59G0609 Tripterygium wilfordii HOM05D006954 ORTHO05D008729 4.7e-53 213.4 603 34.0
Ciclev10023836m.g Citrus clementina HOM05D006638 ORTHO05D008246 3.0e-52 210.7 471 37.2
Duzib133G0753 Durio zibethinus HOM05D006954 ORTHO05D008729 3.3e-51 207.2 485 35.9
Gohir.A07G147000 Gossypium hirsutum HOM05D006954 ORTHO05D008729 3.3e-51 207.2 599 34.6
Thecc.01G384400 Theobroma cacao HOM05D006954 ORTHO05D008729 5.7e-51 206.5 535 35.9
Atru.chr5.233 Acer truncatum HOM05D006954 ORTHO05D008729 1.7e-50 204.9 398 37.9
Gohir.D07G153000 Gossypium hirsutum HOM05D006954 ORTHO05D008729 1.1e-49 202.2 560 35.4
Ca_19859_v3 Cicer arietinum L. HOM05D006954 ORTHO05D008729 1.2e-48 198.7 452 39.8
FAN01G1544 Fragaria x ananassa HOM05D006954 ORTHO05D008729 3.5e-48 197.2 399 38.8
Gorai.001G175100 Gossypium raimondii HOM05D006954 ORTHO05D008729 5.9e-48 196.4 600 34.3
COL.COLO4_12483 Corchorus olitorius HOM05D006954 ORTHO05D008729 2.9e-47 194.1 406 35.7
Dinv43668 Davidia involucrata HOM05D006954 ORTHO05D008729 4.2e-46 190.3 579 32.5
FAN10G2562 Fragaria x ananassa HOM05D006954 ORTHO05D008729 4.7e-45 186.8 326 40.2
FAN06G0609 Fragaria x ananassa HOM05D006954 ORTHO05D008729 6.1e-45 186.4 440 38.9
FAN03G1627 Fragaria x ananassa HOM05D006954 ORTHO05D008729 8.0e-45 186.0 435 36.3
Psat0s3685g0160 Pisum sativum HOM05D006954 ORTHO05D008729 8.8e-44 182.6 452 39.2
FAN10G3525 Fragaria x ananassa HOM05D006954 ORTHO05D008729 2.0e-43 181.4 326 39.6
FAN06G1022 Fragaria x ananassa HOM05D006954 ORTHO05D008729 2.2e-42 177.9 440 38.0
RcHm_v2.0_Chr1g0349021 Rosa chinensis HOM05D006954 ORTHO05D008729 8.2e-42 176.0 530 30.4
TPR.G4994 Trifolium pratense HOM05D006954 ORTHO05D008246 1.5e-38 165.2 406 39.4
Oeu009770.1 Olea europaea HOM05D006954 ORTHO05D008729 7.5e-35 152.9 235 45.1
AUR62013686 Chenopodium quinoa HOM05D006954 ORTHO05D008729 8.3e-34 149.4 250 40.4
Oeu031219.1 Olea europaea HOM05D006954 ORTHO05D008729 1.8e-33 148.3 212 45.3
Solyc01g090850.3 Solanum lycopersicum HOM05D006954 ORTHO05D008729 2.4e-33 147.9 426 31.5
GSVIVG01018156001 Vitis vinifera HOM05D006638 ORTHO05D008246 2.4e-33 147.9 366 36.3
Dinv21639 Davidia involucrata HOM05D006954 ORTHO05D008729 3.1e-33 147.5 351 35.6
Ah.05g173790 Amaranthus hybridus HOM05D006954 ORTHO05D008729 5.4e-33 146.7 386 32.4
TAR375G0455 Trochodendron aralioides HOM05D006954 ORTHO05D008729 9.1e-33 146.0 343 35.3
Peaxi162Scf00803g00025 Petunia axillaris HOM05D006954 ORTHO05D008729 2.7e-32 144.4 444 29.7
AUR62004161 Chenopodium quinoa HOM05D006954 ORTHO05D008729 3.5e-32 144.1 250 38.4
EL10Ac1g00835 Beta vulgaris HOM05D006954 ORTHO05D008729 1.3e-31 142.1 247 41.7
Nitab4.5_0011151g0020 Nicotiana tabacum HOM05D006954 ORTHO05D008729 4.2e-30 137.1 320 35.0
CAN.G1872.2 Capsicum annuum HOM05D006954 ORTHO05D008729 5.5e-30 136.7 308 34.4
Rhsim07G0031700 Rhododendron simsii HOM05D001088 ORTHO05D002099 9.5e-30 136.0 222 38.7
Manes.01G080700 Manihot esculenta HOM05D006954 ORTHO05D008729 1.6e-29 135.2 390 31.5
Sopen01g036590 Solanum pennellii HOM05D006954 ORTHO05D008729 1.6e-29 135.2 475 30.5
PGSC0003DMG400026019 Solanum tuberosum HOM05D006954 ORTHO05D008729 2.1e-29 134.8 472 31.4
TAR375G1092 Trochodendron aralioides HOM05D006954 ORTHO05D008729 2.8e-29 134.4 496 30.8
vmacro14083 Vaccinium macrocarpon HOM05D006954 ORTHO05D008729 2.6e-27 127.9 312 34.6
SalBow5G1520 Salvia bowleyana HOM05D006954 ORTHO05D008729 5.7e-27 126.7 287 35.2
Actinidia27466 Actinidia chinensis HOM05D001088 ORTHO05D002099 1.3e-26 125.6 402 30.8
Ciclev10019520m.g Citrus clementina HOM05D006954 ORTHO05D008729 1.3e-26 125.6 243 37.4
Hma1.2p1_0041F.1_g025380 Hydrangea macrophylla HOM05D006954 ORTHO05D008729 1.3e-26 125.6 215 40.0
Hund17048 Selenicereus undatus HOM05D006954 ORTHO05D008729 2.8e-26 124.4 525 30.1
Rhsim07G0108500 Rhododendron simsii HOM05D001088 ORTHO05D002099 1.8e-25 121.7 322 36.3
Sc02g0002800 Simmondsia chinensis HOM05D006954 ORTHO05D008729 5.4e-25 120.2 316 33.2
arahy.Tifrunner.gnm1.ann1.ADMQ1S Arachis hypogaea HOM05D006954 ORTHO05D008729 7.0e-25 119.8 256 34.4
Nitab4.5_0000859g0170 Nicotiana tabacum HOM05D006954 ORTHO05D008729 7.0e-25 119.8 314 33.4
PGR042G3906 Punica granatum HOM05D006954 ORTHO05D008729 1.2e-24 119.0 275 33.5
arahy.Tifrunner.gnm1.ann1.7WP6A4 Arachis hypogaea HOM05D006954 ORTHO05D008729 1.6e-24 118.6 256 34.4
PSO170G0413 Papaver somniferum HOM05D006954 ORTHO05D008729 2.9e-23 114.4 327 30.3
QL12p012133 Quercus lobata HOM05D006954 ORTHO05D008729 1.1e-22 112.5 487 28.5
PSO017G4363 Papaver somniferum HOM05D006954 ORTHO05D008729 2.5e-22 111.3 325 28.6
Aqoxy7G00762 Aquilegia oxysepala HOM05D006954 ORTHO05D008729 7.3e-22 109.8 305 29.8
DCAR_006832 Daucus carota HOM05D001088 ORTHO05D002099 1.6e-21 108.6 431 30.2
Oeu026406.1 Olea europaea HOM05D006954 ORTHO05D008729 1.4e-20 105.5 364 29.1
Lj8P262T33 Lonicera japonica HOM05D006954 ORTHO05D008729 6.8e-20 103.2 318 32.1
Hma1.2p1_0316F.1_g123150 Hydrangea macrophylla HOM05D006954 ORTHO05D008729 2.6e-19 101.3 230 33.0
SGA_v2.0_scaffold11G05525 Striga asiatica HOM05D006954 ORTHO05D008729 9.8e-19 99.4 221 33.0
Lj6C70T9 Lonicera japonica HOM05D006954 ORTHO05D008729 2.9e-18 97.8 245 34.3
Lj2A217G32 Lonicera japonica HOM05D006954 ORTHO05D008729 6.4e-18 96.7 244 33.2
Duzib205G0178 Durio zibethinus HOM05D006954 ORTHO05D008729 4.1e-17 94.0 530 27.5
ECA233G0962 Erigeron canadensis HOM05D006954 ORTHO05D008729 1.2e-16 92.4 208 34.1
SHI20280 Sapria himalayana HOM05D006954 ORTHO05D008729 1.6e-16 92.0 259 30.1
TAR636G1544 Trochodendron aralioides HOM05D006954 ORTHO05D008729 1.6e-16 92.0 134 42.5
RcHm_v2.0_Chr7g0203321 Rosa chinensis HOM05D006954 ORTHO05D008729 3.5e-16 90.9 350 27.4
ECA236G3196 Erigeron canadensis HOM05D006954 ORTHO05D008729 1.0e-15 89.4 291 34.4
Duzib136G0004 Durio zibethinus HOM05D006954 ORTHO05D008729 1.7e-15 88.6 529 26.5
Lsat_1_v5_gn_7_8881 Lactuca sativa HOM05D006954 ORTHO05D008729 2.3e-15 88.2 203 33.0
FvH4_5g18930 Fragaria vesca HOM05D006954 ORTHO05D008729 1.1e-14 85.9 205 30.7
FAN04G0536 Fragaria x ananassa HOM05D006954 ORTHO05D008729 1.9e-14 85.1 345 26.1
QL04p036188 Quercus lobata HOM05D006954 ORTHO05D008729 2.5e-14 84.7 396 26.5
FAN18G2950 Fragaria x ananassa HOM05D006954 ORTHO05D008729 4.3e-14 84.0 205 30.7
CDE11G0492 Ceratophyllum demersum HOM05D006954 ORTHO05D008729 5.6e-14 83.6 219 32.9
HanXRQChr06g0168891 Helianthus annuus HOM05D006954 ORTHO05D008729 1.2e-13 82.4 191 32.5
HanXRQChr06g0169051 Helianthus annuus HOM05D006954 ORTHO05D008729 1.2e-13 82.4 191 32.5
Prupe.5G069800 Prunus persica HOM05D006954 ORTHO05D008729 2.1e-13 81.6 353 27.5
Eucgr.E00424 Eucalyptus grandis HOM05D006954 ORTHO05D008729 6.2e-13 80.1 315 27.0
HPP92_008568 Vanilla planifolia HOM05D006954 ORTHO05D008729 1.4e-12 79.0 336 27.4
FAN13G0002 Fragaria x ananassa HOM05D006954 ORTHO05D008729 1.8e-12 78.6 322 26.7
MBI04_g09501_MAGBIO Magnolia biondii HOM05D006954 ORTHO05D008729 6.8e-12 76.6 349 26.1
Nitab4.5_0000618g0050 Nicotiana tabacum HOM05D020458 ORTHO05D022160 1.2e-11 75.9 237 29.5
Lj9P565T15 Lonicera japonica HOM05D006954 ORTHO05D008729 2.0e-11 75.1 208 30.8
HanXRQChr16g0511611 Helianthus annuus HOM05D006954 ORTHO05D008729 8.3e-10 69.7 228 25.4
Zm00001eb023500 Zea mays HOM05D006954 ORTHO05D008729 1.9e-09 68.6 371 25.1
Zm00001eb391500 Zea mays HOM05D006954 ORTHO05D008729 1.6e-08 65.5 313 24.6
CDE09G0910 Ceratophyllum demersum HOM05D006954 ORTHO05D008729 7.8e-08 63.2 177 29.4
Solyc06g060730.3 Solanum lycopersicum HOM05D020458 ORTHO05D022160 7.8e-08 63.2 155 31.6
PGSC0003DMG400011881 Solanum tuberosum HOM05D020458 ORTHO05D022160 1.0e-07 62.8 158 29.7
Thecc.03G251300 Theobroma cacao HOM05D006954 ORTHO05D008729 1.3e-07 62.4 147 31.3
Sed0003803 Sechium edule HOM05D005220 ORTHO05D006082 3.0e-07 61.2 193 23.8
CiPaw.11G050100 Carya illinoinensis HOM05D005220 ORTHO05D006082 8.6e-07 59.7 202 27.2
Lj2g0025985 Lotus japonicus HOM05D001093 ORTHO05D008729 1.1e-06 59.3 164 27.4
Sed0005854 Sechium edule HOM05D005220 ORTHO05D006082 1.1e-06 59.3 235 25.5
ATR0317G083 Amborella trichopoda HOM05D006954 ORTHO05D008729 1.9e-06 58.5 396 21.5
COL.COLO4_37173 Corchorus olitorius HOM05D006954 ORTHO05D008729 1.9e-06 58.5 392 23.5
Psat1g092320 Pisum sativum HOM05D001093 ORTHO05D000743 1.9e-06 58.5 385 22.9
Nn3g17397 Nelumbo nucifera HOM05D005220 ORTHO05D006082 3.3e-06 57.8 191 26.2
Hma1.2p1_0481F.1_g161950 Hydrangea macrophylla HOM05D005220 ORTHO05D006082 4.3e-06 57.4 186 27.4
Cpa.g.sc94.10 Carica papaya HOM05D005220 ORTHO05D006082 7.3e-06 56.6 204 28.9
Lalb_Chr23g0273001 Lupinus albus HOM05D005220 ORTHO05D006082 7.3e-06 56.6 208 26.4
ClCG06G015820 Citrullus lanatus HOM05D005220 ORTHO05D006082 9.5e-06 56.2 246 25.2
Nitab4.5_0007954g0010 Nicotiana tabacum HOM05D005220 ORTHO05D006082 9.5e-06 56.2 237 25.3


User provided reference genes

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