Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.008G140300 Phaseolus vulgaris HOM05D006948 ORTHO05D008703 1.0e-51 206.5 106 100.0
VMungo1383G1377 Vigna mungo HOM05D006948 ORTHO05D008703 2.0e-42 175.6 106 83.0
Ca_27396_v3 Cicer arietinum L. HOM05D006948 ORTHO05D008703 2.3e-30 135.6 99 71.7
Glyma.01G074400 Glycine max HOM05D006948 ORTHO05D008703 1.2e-28 129.8 102 67.6
Medtr7g446140 Medicago truncatula HOM05D006948 ORTHO05D008703 3.6e-28 128.3 99 68.7
Lj1g0016170 Lotus japonicus HOM05D006948 ORTHO05D008703 8.0e-28 127.1 89 75.3
TPR.G39099 Trifolium pratense HOM05D006948 ORTHO05D008703 8.9e-27 123.6 102 63.7
Lalb_Chr19g0126621 Lupinus albus HOM05D006948 ORTHO05D008703 9.2e-24 113.6 82 69.5
arahy.Tifrunner.gnm1.ann1.96FU63 Arachis hypogaea HOM05D006948 ORTHO05D008703 1.2e-23 113.2 84 65.5
arahy.Tifrunner.gnm1.ann1.9NP6XU Arachis hypogaea HOM05D006948 ORTHO05D008703 1.2e-23 113.2 84 65.5
Ciclev10023020m.g Citrus clementina HOM05D006948 ORTHO05D008703 1.2e-20 103.2 101 53.5
AUR62023432 Chenopodium quinoa HOM05D006948 ORTHO05D008703 2.3e-19 99.0 82 57.3
Duzib138G1111 Durio zibethinus HOM05D006948 ORTHO05D008703 3.1e-19 98.6 101 48.5
Hund17076 Selenicereus undatus HOM05D006948 ORTHO05D008703 4.0e-19 98.2 97 51.5
CiPaw.13G028600 Carya illinoinensis HOM05D006948 ORTHO05D008703 8.9e-19 97.1 82 54.9
Atru.chr4.2323 Acer truncatum HOM05D006948 ORTHO05D008703 1.5e-18 96.3 93 50.5
Gohir.A08G029800 Gossypium hirsutum HOM05D006948 ORTHO05D008703 1.5e-18 96.3 101 47.5
Gorai.004G039500 Gossypium raimondii HOM05D006948 ORTHO05D008703 5.8e-18 94.4 101 46.5
PGR042G1623 Punica granatum HOM05D006948 ORTHO05D008703 5.8e-18 94.4 82 54.9
Cpa.g.sc5.223 Carica papaya HOM05D006948 ORTHO05D008703 9.8e-18 93.6 95 46.3
Manes.05G052600 Manihot esculenta HOM05D006948 ORTHO05D008703 9.8e-18 93.6 82 54.9
Thecc.01G389700 Theobroma cacao HOM05D006948 ORTHO05D008703 9.8e-18 93.6 99 51.5
Potri.014G054300 Populus trichocarpa HOM05D006948 ORTHO05D008703 2.2e-17 92.4 101 49.5
Gohir.D08G040600 Gossypium hirsutum HOM05D006948 ORTHO05D008703 2.9e-17 92.0 101 45.5
Actinidia12660 Actinidia chinensis HOM05D006948 ORTHO05D008703 6.4e-17 90.9 79 54.4
EL10Ac1g00789 Beta vulgaris HOM05D006948 ORTHO05D008703 6.4e-17 90.9 87 52.9
COL.COLO4_12436 Corchorus olitorius HOM05D006948 ORTHO05D008703 6.4e-17 90.9 103 45.6
Thecc.01G390200 Theobroma cacao HOM05D006948 ORTHO05D008703 6.4e-17 90.9 96 46.9
CSS0003978 Camellia sinensis var. sinensis HOM05D006948 ORTHO05D008703 8.3e-17 90.5 100 47.0
Sp5g02740 Schrenkiella parvula HOM05D006948 ORTHO05D008703 8.3e-17 90.5 105 41.9
CsaV3_3G007550 Cucumis sativus L. HOM05D006948 ORTHO05D008703 1.1e-16 90.1 99 45.5
Sabra14G0040200 Salix brachista HOM05D006948 ORTHO05D008703 2.4e-16 89.0 96 46.9
Carub.0005s2721 Capsella rubella HOM05D006948 ORTHO05D008703 7.1e-16 87.4 101 43.6
AT3G60480 Arabidopsis thaliana HOM05D006948 ORTHO05D008703 1.2e-15 86.7 104 43.3
TWI59G0066 Tripterygium wilfordii HOM05D006948 ORTHO05D008703 1.2e-15 86.7 82 52.4
PSO732G0264 Papaver somniferum HOM05D006948 ORTHO05D008703 1.6e-15 86.3 95 45.3
AL5G42750 Arabidopsis lyrata HOM05D006948 ORTHO05D008703 3.5e-15 85.1 97 43.3
CARHR170860 Cardamine hirsuta HOM05D006948 ORTHO05D008703 4.6e-15 84.7 96 43.8
Aa31LG10G14620 Aethionema arabicum HOM05D006948 ORTHO05D008703 6.0e-15 84.3 93 45.2
Cfa012992 Carpinus fangiana HOM05D006948 ORTHO05D008703 6.0e-15 84.3 79 51.9
BcaC07g40569 Brassica carinata HOM05D006948 ORTHO05D008703 7.8e-15 84.0 100 40.0
AUR62018049 Chenopodium quinoa HOM05D006948 ORTHO05D008703 7.8e-15 84.0 70 55.7
Eucgr.E01580 Eucalyptus grandis HOM05D006948 ORTHO05D008703 1.7e-14 82.8 80 52.5
Nitab4.5_0001818g0020 Nicotiana tabacum HOM05D006948 ORTHO05D008703 2.3e-14 82.4 100 43.0
Prupe.2G124300 Prunus persica HOM05D006948 ORTHO05D008703 2.3e-14 82.4 100 44.0
Rhsim01G0137500 Rhododendron simsii HOM05D006948 ORTHO05D008703 2.3e-14 82.4 77 49.4
Psat3g154680 Pisum sativum HOM05D006948 ORTHO05D008703 3.0e-14 82.0 76 56.6
MD00G1058900 Malus domestica HOM05D006948 ORTHO05D008703 3.9e-14 81.6 100 45.0
Peaxi162Scf00392g00125 Petunia axillaris HOM05D006948 ORTHO05D008703 5.1e-14 81.3 100 43.0
BcaC07g40567 Brassica carinata HOM05D006948 ORTHO05D008703 6.6e-14 80.9 96 40.6
C08p35470 Brassica napus HOM05D006948 ORTHO05D008703 6.6e-14 80.9 96 40.6
THA.LOC104817199 Tarenaya hassleriana HOM05D006948 ORTHO05D008703 1.5e-13 79.7 77 53.2
MSTRG.28159 Avicennia marina HOM05D006948 ORTHO05D008703 4.3e-13 78.2 102 44.1
Dinv43640 Davidia involucrata HOM05D006948 ORTHO05D008703 9.5e-13 77.0 95 44.2
PSO675G6563 Papaver somniferum HOM05D006948 ORTHO05D008703 1.6e-12 76.3 80 47.5
Cc00_g20460 Coffea canephora HOM05D006948 ORTHO05D008703 2.1e-12 75.9 102 41.2
Lsat_1_v5_gn_7_10441 Lactuca sativa HOM05D006948 ORTHO05D008703 2.1e-12 75.9 96 43.8
BcaC07g42775 Brassica carinata HOM05D006948 ORTHO05D008703 8.1e-12 73.9 79 43.0
Hma1.2p1_1740F.1_g300040 Hydrangea macrophylla HOM05D006948 ORTHO05D008703 1.4e-11 73.2 76 50.0
BolC8t51138H Brassica oleracea HOM05D006948 ORTHO05D008703 1.8e-11 72.8 79 43.0
CANSAT21G1424 Cannabis sativa HOM05D006948 ORTHO05D008703 1.8e-11 72.8 92 40.2
HanXRQChr06g0168761 Helianthus annuus HOM05D006948 ORTHO05D008703 2.3e-11 72.4 87 44.8
Nn1g00906 Nelumbo nucifera HOM05D006948 ORTHO05D008703 2.3e-11 72.4 75 49.3
QL04p031942 Quercus lobata HOM05D006948 ORTHO05D008703 2.3e-11 72.4 79 45.6
Solyc01g090500.4 Solanum lycopersicum HOM05D006948 ORTHO05D008703 2.3e-11 72.4 80 43.8
ClCG05G000390 Citrullus lanatus HOM05D006948 ORTHO05D008703 4.0e-11 71.6 76 47.4
QL04p033368 Quercus lobata HOM05D006948 ORTHO05D008703 5.2e-11 71.2 76 47.4
Sopen01g036290 Solanum pennellii HOM05D006948 ORTHO05D008703 6.8e-11 70.9 80 43.8
MELO3C005977.2 Cucumis melo HOM05D006948 ORTHO05D008703 8.9e-11 70.5 77 46.8
ECA236G1236 Erigeron canadensis HOM05D006948 ORTHO05D008703 8.9e-11 70.5 74 47.3
Nitab4.5_0002874g0090 Nicotiana tabacum HOM05D006948 ORTHO05D008703 1.5e-10 69.7 84 44.0
AUR62013722 Chenopodium quinoa HOM05D006948 ORTHO05D008703 2.6e-10 68.9 63 52.4
QL04p032282 Quercus lobata HOM05D006948 ORTHO05D008703 9.9e-10 67.0 65 47.7
SGA_v2.0_scaffold43G16525 Striga asiatica HOM05D006948 ORTHO05D008703 9.9e-10 67.0 88 38.6
Sed0014312 Sechium edule HOM05D006948 ORTHO05D008703 1.3e-09 66.6 99 37.4
Medtr7g446470 Medicago truncatula HOM05D006948 ORTHO05D008703 1.7e-09 66.2 50 66.0
QL04p032169 Quercus lobata HOM05D006948 ORTHO05D008703 1.7e-09 66.2 64 46.9
QL04p033225 Quercus lobata HOM05D006948 ORTHO05D008703 1.7e-09 66.2 64 46.9
A09p52730 Brassica napus HOM05D006948 ORTHO05D008703 6.4e-09 64.3 108 32.4
Haze_02785 Corylus avellana HOM05D006948 ORTHO05D008703 6.4e-09 64.3 56 53.6
Haze_02790 Corylus avellana HOM05D006948 ORTHO05D008703 1.1e-08 63.5 60 51.7
Oeu035671.1 Olea europaea HOM05D006948 ORTHO05D008703 1.1e-08 63.5 78 43.6
CDE11G0572 Ceratophyllum demersum HOM05D006948 ORTHO05D008703 1.4e-08 63.2 99 40.4
Aqoxy7G00836 Aquilegia oxysepala HOM05D006948 ORTHO05D008703 2.4e-08 62.4 106 36.8
PGSC0003DMG401026039 Solanum tuberosum HOM05D006948 ORTHO05D008703 2.4e-08 62.4 62 46.8
Os04g0549400 Oryza sativa ssp. japonica HOM05D006948 ORTHO05D008703 5.4e-08 61.2 95 34.7
ATR0057G003 Amborella trichopoda HOM05D006948 ORTHO05D008703 9.2e-08 60.5 78 41.0
RcHm_v2.0_Chr1g0346581 Rosa chinensis HOM05D006948 ORTHO05D008703 1.6e-07 59.7 81 37.0
Zm00001eb429840 Zea mays HOM05D006948 ORTHO05D008703 1.6e-07 59.7 95 33.7
CDE02G3860 Ceratophyllum demersum HOM05D006948 ORTHO05D008703 2.1e-07 59.3 99 38.4
unitig_0.g2760 Utricularia gibba HOM05D006948 ORTHO05D008703 2.1e-07 59.3 67 43.3
Thecc.01G390600 Theobroma cacao HOM05D006948 ORTHO05D008703 3.5e-07 58.5 50 58.0
MD07G1101200 Malus domestica HOM05D006948 ORTHO05D008703 7.8e-07 57.4 77 45.5
Sc23g0003950 Simmondsia chinensis HOM05D006948 ORTHO05D008703 3.9e-06 55.1 52 55.8
Haze_24986 Corylus avellana HOM05D006948 ORTHO05D008703 8.6e-06 53.9 60 45.0
FAN01G0218 Fragaria x ananassa HOM05D006948 ORTHO05D008703 8.6e-06 53.9 101 31.7
FAN03G2439 Fragaria x ananassa HOM05D006948 ORTHO05D008703 8.6e-06 53.9 101 31.7
FAN10G3172 Fragaria x ananassa HOM05D006948 ORTHO05D008703 8.6e-06 53.9 101 31.7
FAN10G3965 Fragaria x ananassa HOM05D006948 ORTHO05D008703 8.6e-06 53.9 101 31.7


User provided reference genes

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