Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.008G140200 Phaseolus vulgaris HOM05D000395 ORTHO05D000088 2.9e-57 224.9 110 100.0
VMungo1383G3002 Vigna mungo HOM05D000395 ORTHO05D000088 5.2e-30 134.4 100 66.0
Glyma.08G339200 Glycine max HOM05D000395 ORTHO05D000088 9.9e-21 103.6 102 52.0
Glyma.08G339100 Glycine max HOM05D000395 ORTHO05D000088 8.4e-20 100.5 103 52.4
arahy.Tifrunner.gnm1.ann1.41XJ7P Arachis hypogaea HOM05D000395 ORTHO05D000088 1.2e-10 70.1 104 40.4
arahy.Tifrunner.gnm1.ann1.WQR5HD Arachis hypogaea HOM05D000395 ORTHO05D000088 3.5e-10 68.6 104 39.4
Eucgr.D00268 Eucalyptus grandis HOM05D000395 ORTHO05D000088 6.6e-09 64.3 89 39.3
Lj1g0010041 Lotus japonicus HOM05D000395 ORTHO05D000088 8.7e-09 63.9 96 36.5
arahy.Tifrunner.gnm1.ann1.WFEC9T Arachis hypogaea HOM05D000395 ORTHO05D000088 2.5e-08 62.4 93 38.7
FAN19G3035 Fragaria x ananassa HOM05D000395 ORTHO05D000088 3.3e-08 62.0 63 49.2
Medtr3g061340 Medicago truncatula HOM05D000395 ORTHO05D000088 9.6e-08 60.5 92 37.0
Medtr3g061370 Medicago truncatula HOM05D000395 ORTHO05D000088 9.6e-08 60.5 92 37.0
arahy.Tifrunner.gnm1.ann1.T57XL4 Arachis hypogaea HOM05D000395 ORTHO05D000088 1.6e-07 59.7 108 37.0
arahy.Tifrunner.gnm1.ann1.ICSV9P Arachis hypogaea HOM05D000395 ORTHO05D000088 2.1e-07 59.3 95 41.1
FvH4_1g14680 Fragaria vesca HOM05D000395 ORTHO05D000088 2.1e-07 59.3 73 43.8
FAN28G0564 Fragaria x ananassa HOM05D000395 ORTHO05D000088 2.1e-07 59.3 63 47.6
Glyma.20G108400 Glycine max HOM05D000395 ORTHO05D000088 2.1e-07 59.3 95 34.7
Phvul.007G019700 Phaseolus vulgaris HOM05D000395 ORTHO05D000088 2.1e-07 59.3 95 40.0
CANSAT01G3239 Cannabis sativa HOM05D000395 ORTHO05D000088 2.8e-07 58.9 98 33.7
TPR.G14716 Trifolium pratense HOM05D000395 ORTHO05D000088 3.6e-07 58.5 92 34.8
CSS0005810 Camellia sinensis var. sinensis HOM05D000395 ORTHO05D000088 4.8e-07 58.2 84 36.9
RcHm_v2.0_Chr2g0103541 Rosa chinensis HOM05D000395 ORTHO05D000088 4.8e-07 58.2 63 44.4
arahy.Tifrunner.gnm1.ann1.SU40KZ Arachis hypogaea HOM05D000395 ORTHO05D000088 6.2e-07 57.8 93 37.6
CANSAT01G1431 Cannabis sativa HOM05D000395 ORTHO05D000088 6.2e-07 57.8 98 33.7
Lj2A565G29 Lonicera japonica HOM05D000395 ORTHO05D000088 8.1e-07 57.4 83 37.3
RcHm_v2.0_Chr2g0103491 Rosa chinensis HOM05D000395 ORTHO05D000088 8.1e-07 57.4 69 40.6
Medtr3g061300 Medicago truncatula HOM05D000395 ORTHO05D000088 1.1e-06 57.0 97 36.1
TPR.G14727 Trifolium pratense HOM05D000395 ORTHO05D000088 1.1e-06 57.0 91 36.3
CANSAT01G0137 Cannabis sativa HOM05D000395 ORTHO05D000088 2.4e-06 55.8 84 36.9
Eucgr.D00269 Eucalyptus grandis HOM05D000395 ORTHO05D000088 2.4e-06 55.8 89 36.0
Prupe.7G044800 Prunus persica HOM05D000395 ORTHO05D000088 2.4e-06 55.8 83 42.2
arahy.Tifrunner.gnm1.ann1.Y03UJB Arachis hypogaea HOM05D000395 ORTHO05D000088 3.1e-06 55.5 93 36.6
FAN26G3456 Fragaria x ananassa HOM05D000395 ORTHO05D000088 3.1e-06 55.5 90 32.2
arahy.Tifrunner.gnm1.ann1.CA68NU Arachis hypogaea HOM05D000395 ORTHO05D000088 4.0e-06 55.1 62 41.9
Eucgr.G00890 Eucalyptus grandis HOM05D000395 ORTHO05D000088 4.0e-06 55.1 91 35.2
Lj1g0007361 Lotus japonicus HOM05D000395 ORTHO05D000088 5.3e-06 54.7 59 42.4
arahy.Tifrunner.gnm1.ann1.2V316J Arachis hypogaea HOM05D000395 ORTHO05D000088 6.9e-06 54.3 90 35.6
Sabra01G0175400 Salix brachista HOM05D000395 ORTHO05D000088 6.9e-06 54.3 84 41.7
Lj2A564T41 Lonicera japonica HOM05D000395 ORTHO05D000088 9.0e-06 53.9 83 36.1
Lj2C600T9 Lonicera japonica HOM05D000395 ORTHO05D000088 9.0e-06 53.9 83 36.1
Lalb_Chr06g0163601 Lupinus albus HOM05D000395 ORTHO05D000088 9.0e-06 53.9 92 34.8
Psat5g163560 Pisum sativum HOM05D000395 ORTHO05D000088 9.0e-06 53.9 91 35.2


User provided reference genes

Program Settings