Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.008G137800 Phaseolus vulgaris HOM05D006548 ORTHO05D008064 1.7e-85 319.3 165 100.0
VMungo1383G2587 Vigna mungo HOM05D006548 ORTHO05D008064 5.4e-79 297.7 165 92.1
Glyma.08G343100 Glycine max HOM05D006548 ORTHO05D008064 9.4e-76 287.0 165 87.3
Glyma.18G153900 Glycine max HOM05D006548 ORTHO05D008064 5.7e-73 277.7 165 86.7
Lj1g0008534 Lotus japonicus HOM05D006548 ORTHO05D008064 5.9e-70 267.7 165 81.8
Lalb_Chr01g0021941 Lupinus albus HOM05D006548 ORTHO05D008064 2.3e-66 255.8 165 77.6
Psat3g151760 Pisum sativum HOM05D006548 ORTHO05D008064 6.8e-66 254.2 165 77.6
arahy.Tifrunner.gnm1.ann1.C7NXRU Arachis hypogaea HOM05D006548 ORTHO05D008064 3.4e-65 251.9 166 79.5
arahy.Tifrunner.gnm1.ann1.I0E60T Arachis hypogaea HOM05D006548 ORTHO05D008064 8.3e-64 247.3 166 77.7
TPR.G26806 Trifolium pratense HOM05D006548 ORTHO05D008064 1.1e-63 246.9 166 75.9
Ca_07442_v3 Cicer arietinum L. HOM05D006548 ORTHO05D008064 7.0e-63 244.2 166 74.1
Lalb_Chr03g0040981 Lupinus albus HOM05D006548 ORTHO05D008064 1.6e-62 243.0 165 74.5
TAR362G1118 Trochodendron aralioides HOM05D006548 ORTHO05D008064 3.9e-61 238.4 162 71.0
Potri.002G239000 Populus trichocarpa HOM05D006548 ORTHO05D008064 8.6e-61 237.3 162 72.2
Medtr7g051230 Medicago truncatula HOM05D006548 ORTHO05D008064 7.3e-60 234.2 165 71.5
Manes.12G059600 Manihot esculenta HOM05D006548 ORTHO05D008064 9.5e-60 233.8 162 71.0
Sabra02G0182000 Salix brachista HOM05D006548 ORTHO05D008064 1.2e-59 233.4 162 71.0
COL.COLO4_06931 Corchorus olitorius HOM05D006548 ORTHO05D008064 1.6e-59 233.0 162 71.6
Ciclev10017030m.g Citrus clementina HOM05D006548 ORTHO05D008064 2.1e-59 232.6 163 71.2
Lj2P1115T39 Lonicera japonica HOM05D006548 ORTHO05D008064 6.2e-59 231.1 162 70.4
Manes.13G055300 Manihot esculenta HOM05D006548 ORTHO05D008064 8.0e-59 230.7 162 69.8
Aqoxy2G04054 Aquilegia oxysepala HOM05D006548 ORTHO05D008064 2.3e-58 229.2 163 69.3
CSS0021481 Camellia sinensis var. sinensis HOM05D006548 ORTHO05D008064 3.1e-58 228.8 162 71.6
Hma1.2p1_0161F.1_g071510 Hydrangea macrophylla HOM05D006548 ORTHO05D008064 4.0e-58 228.4 162 71.6
Nn3g18599 Nelumbo nucifera HOM05D006548 ORTHO05D008064 5.2e-58 228.0 162 70.4
Atru.chr6.3534 Acer truncatum HOM05D006548 ORTHO05D008064 6.8e-58 227.6 163 69.3
Gorai.007G160300 Gossypium raimondii HOM05D006548 ORTHO05D008064 6.8e-58 227.6 162 71.0
Gohir.A11G143200 Gossypium hirsutum HOM05D006548 ORTHO05D008064 8.9e-58 227.3 162 71.0
PGR083G0463 Punica granatum HOM05D006548 ORTHO05D008064 8.9e-58 227.3 162 68.5
vmacro02826 Vaccinium macrocarpon HOM05D006548 ORTHO05D008064 1.5e-57 226.5 159 67.9
Sabra14G0135300 Salix brachista HOM05D006548 ORTHO05D008064 2.0e-57 226.1 162 69.8
Rhsim13G0053600 Rhododendron simsii HOM05D006548 ORTHO05D008064 2.6e-57 225.7 160 68.1
TWI36G0698 Tripterygium wilfordii HOM05D006548 ORTHO05D008064 2.6e-57 225.7 166 68.7
TWI75G1339 Tripterygium wilfordii HOM05D006548 ORTHO05D008064 2.6e-57 225.7 166 68.1
Gohir.D11G149500 Gossypium hirsutum HOM05D006548 ORTHO05D008064 3.4e-57 225.3 162 69.8
Potri.014G177100 Populus trichocarpa HOM05D006548 ORTHO05D008064 3.4e-57 225.3 162 69.8
Gohir.D07G202600 Gossypium hirsutum HOM05D006548 ORTHO05D008064 1.3e-56 223.4 162 69.8
PSO675G8742 Papaver somniferum HOM05D006548 ORTHO05D008064 1.7e-56 223.0 162 71.0
TWI18G0731 Tripterygium wilfordii HOM05D006548 ORTHO05D008064 1.7e-56 223.0 166 69.3
Sed0004612 Sechium edule HOM05D006548 ORTHO05D008064 2.2e-56 222.6 162 72.2
FAN27G0042 Fragaria x ananassa HOM05D006548 ORTHO05D008064 3.7e-56 221.9 154 70.1
FAN27G0390 Fragaria x ananassa HOM05D006548 ORTHO05D008064 3.7e-56 221.9 154 70.1
Gorai.001G228000 Gossypium raimondii HOM05D006548 ORTHO05D008064 3.7e-56 221.9 162 69.1
RcHm_v2.0_Chr6g0282621 Rosa chinensis HOM05D006548 ORTHO05D008064 3.7e-56 221.9 162 67.9
Nitab4.5_0011925g0010 Nicotiana tabacum HOM05D006548 ORTHO05D008064 8.3e-56 220.7 162 67.3
Duzib211G0675 Durio zibethinus HOM05D006548 ORTHO05D008064 1.1e-55 220.3 163 69.3
FvH4_2g17650 Fragaria vesca HOM05D006548 ORTHO05D008064 1.1e-55 220.3 154 69.5
PSO017G5831 Papaver somniferum HOM05D006548 ORTHO05D008064 1.1e-55 220.3 162 69.1
Cpa.g.sc8.57 Carica papaya HOM05D004405 ORTHO05D005613 1.4e-55 219.9 160 71.9
CANSAT01G2941 Cannabis sativa HOM05D006548 ORTHO05D008064 2.4e-55 219.2 164 67.7
CiPaw.13G058400 Carya illinoinensis HOM05D006548 ORTHO05D008064 4.1e-55 218.4 162 69.8
CSS0032607 Camellia sinensis var. sinensis HOM05D006548 ORTHO05D008064 5.4e-55 218.0 163 69.3
Nitab4.5_0002311g0090 Nicotiana tabacum HOM05D006548 ORTHO05D008064 5.4e-55 218.0 162 66.0
Prupe.8G188900 Prunus persica HOM05D006548 ORTHO05D008064 5.4e-55 218.0 166 71.1
Cc01_g16030 Coffea canephora HOM05D006548 ORTHO05D008064 1.2e-54 216.9 162 66.7
MBI08_g14954_MAGBIO Magnolia biondii HOM05D006659 ORTHO05D008064 1.6e-54 216.5 163 66.3
FAN24G3284 Fragaria x ananassa HOM05D006548 ORTHO05D008064 2.0e-54 216.1 154 69.5
ClCG09G007890 Citrullus lanatus HOM05D006548 ORTHO05D008064 2.7e-54 215.7 164 68.9
Nn4g25121 Nelumbo nucifera HOM05D006548 ORTHO05D008064 2.7e-54 215.7 162 66.7
Peaxi162Scf00372g00041 Petunia axillaris HOM05D006548 ORTHO05D008064 3.5e-54 215.3 162 66.7
Oeu051515.1 Olea europaea HOM05D006548 ORTHO05D008064 6.0e-54 214.5 162 64.2
MSTRG.17967 Avicennia marina HOM05D006548 ORTHO05D008064 7.8e-54 214.2 162 64.8
MELO3C015717.2 Cucumis melo HOM05D006548 ORTHO05D008064 7.8e-54 214.2 164 67.1
Cfa010631 Carpinus fangiana HOM05D006548 ORTHO05D008064 1.0e-53 213.8 161 72.7
Ah.11g050830 Amaranthus hybridus HOM05D006548 ORTHO05D008064 1.3e-53 213.4 167 65.3
MD10G1150500 Malus domestica HOM05D006548 ORTHO05D008064 1.7e-53 213.0 164 69.5
Nitab4.5_0001348g0010 Nicotiana tabacum HOM05D006548 ORTHO05D008064 1.7e-53 213.0 162 63.6
Nitab4.5_0007144g0040 Nicotiana tabacum HOM05D006548 ORTHO05D008064 1.7e-53 213.0 162 63.6
HanXRQChr08g0231851 Helianthus annuus HOM05D006548 ORTHO05D008064 3.0e-53 212.2 163 66.3
Duzib138G0849 Durio zibethinus HOM05D006548 ORTHO05D008064 3.9e-53 211.8 162 66.0
CARHR082130 Cardamine hirsuta HOM05D006548 ORTHO05D008064 8.6e-53 210.7 161 66.5
Sp3g06390 Schrenkiella parvula HOM05D006548 ORTHO05D008064 1.5e-52 209.9 162 65.4
THA.LOC104819003 Tarenaya hassleriana HOM05D006548 ORTHO05D008064 1.5e-52 209.9 164 65.2
Migut.N00670 Erythranthe guttata HOM05D006548 ORTHO05D008064 1.9e-52 209.5 163 64.4
Haze_03573 Corylus avellana HOM05D006548 ORTHO05D008064 5.6e-52 208.0 163 70.6
HPP92_002744 Vanilla planifolia HOM05D006548 ORTHO05D008064 5.6e-52 208.0 163 65.6
PGSC0003DMG400027686 Solanum tuberosum HOM05D006548 ORTHO05D008064 1.6e-51 206.5 162 65.4
SGA_v2.0_scaffold95G28706 Striga asiatica HOM05D006548 ORTHO05D008064 1.6e-51 206.5 163 63.2
Sopen06g034400 Solanum pennellii HOM05D006548 ORTHO05D008064 2.1e-51 206.1 162 65.4
Thhalv10021677m.g Eutrema salsugineum HOM05D006548 ORTHO05D008064 2.8e-51 205.7 158 63.9
AL3G18800 Arabidopsis lyrata HOM05D006548 ORTHO05D008064 6.2e-51 204.5 157 65.6
AT3G07480 Arabidopsis thaliana HOM05D006548 ORTHO05D008064 6.2e-51 204.5 157 65.6
CAN.G874.34 Capsicum annuum HOM05D006548 ORTHO05D008064 6.2e-51 204.5 162 63.6
BolC5t34638H Brassica oleracea HOM05D006548 ORTHO05D008064 8.1e-51 204.1 158 65.2
BcaC05g29539 Brassica carinata HOM05D006548 ORTHO05D008064 1.1e-50 203.8 159 64.8
AUR62028648 Chenopodium quinoa HOM05D006548 ORTHO05D008064 1.1e-50 203.8 167 61.7
A05p40730 Brassica napus HOM05D006548 ORTHO05D008064 1.8e-50 203.0 158 64.6
BraA05t22804Z Brassica rapa HOM05D006548 ORTHO05D008064 1.8e-50 203.0 158 64.6
Carub.0003s0703 Capsella rubella HOM05D006548 ORTHO05D008064 3.1e-50 202.2 157 65.0
C05p59840 Brassica napus HOM05D006548 ORTHO05D008064 4.0e-50 201.8 158 64.6
Thecc.01G209700 Theobroma cacao HOM05D006548 ORTHO05D008064 4.0e-50 201.8 149 71.1
BcaB03g14699 Brassica carinata HOM05D006548 ORTHO05D008064 6.8e-50 201.1 158 63.9
Aa31LG5G18040 Aethionema arabicum HOM05D006548 ORTHO05D008064 1.5e-49 199.9 160 63.1
QL09p047049 Quercus lobata HOM05D006548 ORTHO05D008064 2.6e-49 199.1 156 64.7
PGSC0003DMG400020639 Solanum tuberosum HOM05D006548 ORTHO05D008064 3.4e-49 198.7 162 64.2
Solyc06g007630.1 Solanum lycopersicum HOM05D006548 ORTHO05D008064 5.8e-49 198.0 162 64.2
Sopen06g002520 Solanum pennellii HOM05D006548 ORTHO05D008064 5.8e-49 198.0 162 64.2
GSVIVG01003797001 Vitis vinifera HOM05D006548 ORTHO05D008064 7.5e-49 197.6 121 71.9
Lsat_1_v5_gn_9_16480 Lactuca sativa HOM05D006548 ORTHO05D008064 2.2e-48 196.1 168 61.3
DCAR_030798 Daucus carota HOM05D006548 ORTHO05D008064 2.9e-48 195.7 163 60.7
ECA247G0922 Erigeron canadensis HOM05D006548 ORTHO05D008064 2.9e-48 195.7 163 60.1
CsaV3_7G027180 Cucumis sativus L. HOM05D006548 ORTHO05D008064 6.4e-48 194.5 151 67.5
ATR0824G029 Amborella trichopoda HOM05D006548 ORTHO05D008064 8.3e-48 194.1 155 63.9
unitig_61.g26345 Utricularia gibba HOM05D006548 ORTHO05D008064 1.9e-47 193.0 163 57.7
Os09g0514600 Oryza sativa ssp. japonica HOM05D006548 ORTHO05D008064 1.2e-43 180.3 162 58.6
Zm00001eb102720 Zea mays HOM05D006548 ORTHO05D008064 4.7e-43 178.3 162 58.6
Zm00001eb318350 Zea mays HOM05D006548 ORTHO05D008064 8.9e-42 174.1 116 70.7
EL10Ac5g10597 Beta vulgaris HOM05D006548 ORTHO05D008064 1.3e-40 170.2 158 57.6
Sc05g0001680 Simmondsia chinensis HOM05D006548 ORTHO05D008064 1.7e-40 169.9 149 60.4
Gohir.A07G196200 Gossypium hirsutum HOM05D006548 ORTHO05D008064 2.3e-37 159.5 157 54.1
Pp3c2_31000 Physcomitrium patens HOM05D006548 ORTHO05D008064 1.2e-35 153.7 163 46.0
AagrBONN_evm.TU.Sc2ySwM_362.984 Anthoceros agrestis HOM05D006548 ORTHO05D008064 3.0e-29 132.5 163 44.8
Ciclev10013747m.g Citrus clementina HOM05D006548 ORTHO05D008064 2.1e-27 126.3 82 74.4
CDE12G0850 Ceratophyllum demersum HOM05D006548 ORTHO05D008064 2.8e-27 125.9 74 71.6
BcaC05g29538 Brassica carinata HOM05D006548 ORTHO05D008064 1.8e-26 123.2 109 61.5
Mapoly0085s0036 Marchantia polymorpha HOM05D006548 ORTHO05D008064 6.9e-26 121.3 155 41.3
C03p67920 Brassica napus HOM05D006548 ORTHO05D008064 8.4e-24 114.4 89 61.8
BcaC01g02172 Brassica carinata HOM05D006548 ORTHO05D008064 3.2e-23 112.5 92 59.8
SEGI_16405 Sequoiadendron giganteum HOM05D002489 ORTHO05D002653 4.5e-17 92.0 79 59.5
Actinidia30005 Actinidia chinensis HOM05D006548 ORTHO05D008064 2.2e-16 89.7 164 43.3
CBR_g34314 Chara braunii HOM05D006548 ORTHO05D008064 3.0e-13 79.3 122 35.2
SMO119G0279 Selaginella moellendorffii HOM05D006548 ORTHO05D008064 5.1e-13 78.6 122 35.2
BolC3t19017H Brassica oleracea HOM05D006548 ORTHO05D008064 1.3e-11 73.9 51 62.7
BraA03t13759Z Brassica rapa HOM05D006548 ORTHO05D008064 2.8e-11 72.8 51 64.7
Mapoly0113s0043 Marchantia polymorpha HOM05D006548 ORTHO05D008064 1.3e-08 63.9 131 32.1


User provided reference genes

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